RNA–Protein interactions for RNA: ENST00000475542.1

SEC23IP-206, Transcript of SEC23 interacting protein, humanhuman

TSL 3

Gene SEC23IP, Length 552 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-206ENST00000475542 C9orf153Q5TBE3 101 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 C10orf113Q5VZT2 155 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 Q6AWC8 147 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 FAM223AQ8IWN6 122 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 TCTE3Q8IZS6 198 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 TTC9CQ8N5M4 171 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 TMEM263Q8WUH6 116 aaKnown RBP-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 MT1LQ93083 61 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 MGST2Q99735 147 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 PSMG3Q9BT73 122 aaPredicted RBP-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 TMEM191AQ9H0A3 160 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 CENPHQ9H3R5 247 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 UQCR10Q9UDW1 63 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 LSM2Q9Y333 95 aaKnown RBP-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 LENEPQ9Y5L5 61 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 SPTAN1Q13813 2472 aaKnown RBP-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 PKD1P98161 4303 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 REV3LO60673 3130 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 MYH6P13533 1939 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 MAGI3Q5TCQ9 1506 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 LYSTQ99698 3801 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 UHRF1BP1LA0JNW5 1464 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 PTPRMP28827 1452 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 FYCO1Q9BQS8 1478 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 MBD5Q9P267 1494 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 CEP152O94986 1710 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 LRBAP50851 2863 aa-0.35□□□□□ -2.47
SEC23IP-206ENST00000475542 GOLGA4Q13439 2230 aaKnown RBP-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 BTAF1O14981 1849 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 PREX1Q8TCU6 1659 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 DISP2A7MBM2 1401 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 EDC4Q6P2E9 1401 aaKnown RBP-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 RGPD3A6NKT7 1758 aaPredicted RBP-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 ANKRD36CQ5JPF3 1778 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 RGPD4Q7Z3J3 1758 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 RELNP78509 3460 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 TRAV13-2A0A0B4J235 113 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 TRBV7-7A0A0K0K1E9 115 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 MMP24-AS1A0A0U1RRL7 71 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 LOC285095A0A1B0GVY8 99 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 IGLC7A0M8Q6 106 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 CLPSL1A2RUU4 121 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 MT-ATP8P03928 68 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 CBLN1P23435 193 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 UBE2G1P62253 170 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 RPS29P62273 56 aaKnown RBP-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 GNGT1P63211 74 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 KRTAP19-5Q3LI72 72 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 CLLU1Q5K131 121 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 LINC01545Q5VT33 79 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 TMEM244Q5VVB8 128 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 C6orf201Q7Z4U5 140 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 C5orf38Q86SI9 138 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 KRTAP8-1Q8IUC2 63 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 SERP2Q8N6R1 65 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 SKA2Q8WVK7 121 aaPredicted RBP-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 SPTSSAQ969W0 71 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 MAGOHBQ96A72 148 aaKnown RBP-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 SELENOSQ9BQE4 189 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 VAMP8Q9BV40 100 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 DYNLRB1Q9NP97 96 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 AP4S1Q9Y587 144 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 BOD1L1Q8NFC6 3051 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 ANKRD30AQ9BXX3 1397 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 NUP188Q5SRE5 1749 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 KIAA1551Q9HCM1 1747 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 ATP7BP35670 1465 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 C1orf167Q5SNV9 1468 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 SPEF2Q9C093 1822 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 TCHHQ07283 1943 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 ANK3Q12955 4377 aaKnown RBP-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 VPS13DQ5THJ4 4388 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 DIP2CQ9Y2E4 1556 aa-0.36□□□□□ -2.47
SEC23IP-206ENST00000475542 RIMS1Q86UR5 1692 aaKnown RBP-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 MUC22E2RYF6 1773 aaPredicted RBP-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 PRG4Q92954 1404 aaPredicted RBP-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 NCOA3Q9Y6Q9 1424 aa-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 PRKDCP78527 4128 aaKnown RBP-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 MAPKBP1O60336 1514 aa-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 DNAH1Q9P2D7 4330 aa-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 ADGRG4Q8IZF6 3080 aa-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 LOC100130705A0A1B0GUX0 176 aa-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 H3BQF6 201 aa-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 HMGN4O00479 90 aa-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 TRAPPC2P0DI81 140 aa-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 TRAPPC2BP0DI82 140 aa-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 SAA2P0DJI9 122 aaPredicted RBP-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 HLA-DRB4P13762 266 aa-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 NCS1P62166 190 aa-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 CCL8P80075 99 aa-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 Q56UQ5 140 aa-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 LELP1Q5T871 98 aa-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 MRPL54Q6P161 138 aaKnown RBP-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 COX6B2Q6YFQ2 88 aa-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 LCN9Q8WX39 176 aa-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 ARL11Q969Q4 196 aa-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 TRGV9Q99603 122 aa-0.37□□□□□ -2.47
SEC23IP-206ENST00000475542 PRO3102Q9H379 93 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms