RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 CEP162Q5TB80 1403 aa1.43□□□□□ -2.18
SMC5-203ENST00000475540 NOTCH1P46531 2555 aa1.43□□□□□ -2.18
SMC5-203ENST00000475540 VWFP04275 2813 aa1.43□□□□□ -2.18
SMC5-203ENST00000475540 LINC00472Q9H8W2 130 aa1.43□□□□□ -2.18
SMC5-203ENST00000475540 EFCAB6Q5THR3 1501 aa1.43□□□□□ -2.18
SMC5-203ENST00000475540 RNF17Q9BXT8 1623 aaKnown RBP1.43□□□□□ -2.18
SMC5-203ENST00000475540 ATP10BO94823 1461 aa1.43□□□□□ -2.18
SMC5-203ENST00000475540 RALGAPBQ86X10 1494 aa1.43□□□□□ -2.18
SMC5-203ENST00000475540 GLI2P10070 1586 aa1.42□□□□□ -2.18
SMC5-203ENST00000475540 NBEAL2Q6ZNJ1 2754 aa1.42□□□□□ -2.18
SMC5-203ENST00000475540 BOD1L1Q8NFC6 3051 aa1.42□□□□□ -2.18
SMC5-203ENST00000475540 CCDC168Q8NDH2 2452 aa1.42□□□□□ -2.18
SMC5-203ENST00000475540 ABCC2Q92887 1545 aa1.42□□□□□ -2.18
SMC5-203ENST00000475540 ADCY10Q96PN6 1610 aa1.42□□□□□ -2.18
SMC5-203ENST00000475540 A0A0D9SG42 100 aa1.42□□□□□ -2.18
SMC5-203ENST00000475540 ZNF815PA8K554 130 aa1.42□□□□□ -2.18
SMC5-203ENST00000475540 M0R3E3 92 aa1.42□□□□□ -2.18
SMC5-203ENST00000475540 UBE2DNLQ8IWF7 75 aa1.42□□□□□ -2.18
SMC5-203ENST00000475540 SPRR4Q96PI1 79 aa1.42□□□□□ -2.18
SMC5-203ENST00000475540 C20orf78Q9BR46 151 aa1.42□□□□□ -2.18
SMC5-203ENST00000475540 PRO1933Q9H354 126 aa1.42□□□□□ -2.18
SMC5-203ENST00000475540 C10orf95Q9H7T3 257 aa1.42□□□□□ -2.18
SMC5-203ENST00000475540 UBR5O95071 2799 aaPredicted RBP1.42□□□□□ -2.18
SMC5-203ENST00000475540 CEP250Q9BV73 2442 aa1.42□□□□□ -2.18
SMC5-203ENST00000475540 CCDC18Q5T9S5 1454 aa1.42□□□□□ -2.18
SMC5-203ENST00000475540 MAP3K4Q9Y6R4 1608 aa1.41□□□□□ -2.18
SMC5-203ENST00000475540 C10orf142B7Z368 130 aa1.41□□□□□ -2.18
SMC5-203ENST00000475540 K7EP34 96 aa1.41□□□□□ -2.18
SMC5-203ENST00000475540 KRTAP5-10Q6L8G5 202 aa1.41□□□□□ -2.18
SMC5-203ENST00000475540 ASPMQ8IZT6 3477 aa1.41□□□□□ -2.18
SMC5-203ENST00000475540 ZFYVE26Q68DK2 2539 aa1.41□□□□□ -2.18
SMC5-203ENST00000475540 DIP2AQ14689 1571 aa1.41□□□□□ -2.18
SMC5-203ENST00000475540 PDCD11Q14690 1871 aaKnown RBP1.41□□□□□ -2.18
SMC5-203ENST00000475540 SPTAN1Q13813 2472 aaKnown RBP1.41□□□□□ -2.18
SMC5-203ENST00000475540 CEP290O15078 2479 aa1.4□□□□□ -2.19
SMC5-203ENST00000475540 NMBP08949 121 aa1.4□□□□□ -2.19
SMC5-203ENST00000475540 ZNF720Q7Z2F6 126 aa1.4□□□□□ -2.19
SMC5-203ENST00000475540 TMEM263Q8WUH6 116 aaKnown RBP1.4□□□□□ -2.19
SMC5-203ENST00000475540 NUP188Q5SRE5 1749 aa1.4□□□□□ -2.19
SMC5-203ENST00000475540 TMEM131LA2VDJ0 1609 aa1.4□□□□□ -2.19
SMC5-203ENST00000475540 STAB1Q9NY15 2570 aa1.4□□□□□ -2.19
SMC5-203ENST00000475540 IGSF10Q6WRI0 2623 aa1.39□□□□□ -2.19
SMC5-203ENST00000475540 LRRK2Q5S007 2527 aa1.39□□□□□ -2.19
SMC5-203ENST00000475540 RGPD4Q7Z3J3 1758 aa1.39□□□□□ -2.19
SMC5-203ENST00000475540 NCOR1O75376 2440 aa1.39□□□□□ -2.19
SMC5-203ENST00000475540 PIEZO2Q9H5I5 2752 aa1.39□□□□□ -2.19
SMC5-203ENST00000475540 BTAF1O14981 1849 aa1.39□□□□□ -2.19
SMC5-203ENST00000475540 BCE1O60756 84 aa1.39□□□□□ -2.19
SMC5-203ENST00000475540 HAMPP81172 84 aa1.39□□□□□ -2.19
SMC5-203ENST00000475540 Q6JHZ5 121 aa1.39□□□□□ -2.19
SMC5-203ENST00000475540 LCN9Q8WX39 176 aa1.39□□□□□ -2.19
SMC5-203ENST00000475540 CCDC180Q9P1Z9 1646 aa1.39□□□□□ -2.19
SMC5-203ENST00000475540 ANKHD1Q8IWZ3 2542 aaKnown RBP1.39□□□□□ -2.19
SMC5-203ENST00000475540 KIAA0586Q9BVV6 1533 aa1.39□□□□□ -2.19
SMC5-203ENST00000475540 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
SMC5-203ENST00000475540 KIAA1109Q2LD37 5005 aa1.39□□□□□ -2.19
SMC5-203ENST00000475540 LAMA3Q16787 3333 aa1.38□□□□□ -2.19
SMC5-203ENST00000475540 NRXN1Q9ULB1 1477 aa1.38□□□□□ -2.19
SMC5-203ENST00000475540 PKD1L1Q8TDX9 2849 aa1.38□□□□□ -2.19
SMC5-203ENST00000475540 MYO3AQ8NEV4 1616 aa1.38□□□□□ -2.19
SMC5-203ENST00000475540 FLNCQ14315 2725 aa1.38□□□□□ -2.19
SMC5-203ENST00000475540 SMIM11AP58511 58 aa1.38□□□□□ -2.19
SMC5-203ENST00000475540 LINC00846Q9NV44 126 aa1.38□□□□□ -2.19
SMC5-203ENST00000475540 CNOT1A5YKK6 2376 aaKnown RBP1.38□□□□□ -2.19
SMC5-203ENST00000475540 ATRQ13535 2644 aa1.38□□□□□ -2.19
SMC5-203ENST00000475540 NCOR2Q9Y618 2525 aa1.38□□□□□ -2.19
SMC5-203ENST00000475540 EDC4Q6P2E9 1401 aaKnown RBP1.38□□□□□ -2.19
SMC5-203ENST00000475540 UACAQ9BZF9 1416 aa1.38□□□□□ -2.19
SMC5-203ENST00000475540 MYO7AQ13402 2215 aa1.38□□□□□ -2.19
SMC5-203ENST00000475540 PLIN4Q96Q06 1357 aa1.37□□□□□ -2.19
SMC5-203ENST00000475540 KDM3BQ7LBC6 1761 aa1.37□□□□□ -2.19
SMC5-203ENST00000475540 XIRP2A4UGR9 3374 aa1.37□□□□□ -2.19
SMC5-203ENST00000475540 DCAF1Q9Y4B6 1507 aa1.37□□□□□ -2.19
SMC5-203ENST00000475540 SHPRHQ149N8 1683 aa1.37□□□□□ -2.19
SMC5-203ENST00000475540 C7orf77A4D0Y5 90 aa1.37□□□□□ -2.19
SMC5-203ENST00000475540 CYB5AP00167 134 aa1.37□□□□□ -2.19
SMC5-203ENST00000475540 TLN1Q9Y490 2541 aaKnown RBP1.37□□□□□ -2.19
SMC5-203ENST00000475540 RYR1P21817 5038 aa1.37□□□□□ -2.19
SMC5-203ENST00000475540 NLRP1Q9C000 1473 aa1.37□□□□□ -2.19
SMC5-203ENST00000475540 FRYQ5TBA9 3013 aa1.37□□□□□ -2.19
SMC5-203ENST00000475540 WNK3Q9BYP7 1800 aa1.36□□□□□ -2.19
SMC5-203ENST00000475540 S100A3P33764 101 aa1.36□□□□□ -2.19
SMC5-203ENST00000475540 HMGN3Q15651 99 aa1.36□□□□□ -2.19
SMC5-203ENST00000475540 ETDBQ3ZM63 59 aa1.36□□□□□ -2.19
SMC5-203ENST00000475540 S100A16Q96FQ6 103 aaKnown RBP1.36□□□□□ -2.19
SMC5-203ENST00000475540 RABAC1Q9UI14 185 aa1.36□□□□□ -2.19
SMC5-203ENST00000475540 RGPD3A6NKT7 1758 aaPredicted RBP1.36□□□□□ -2.19
SMC5-203ENST00000475540 TENM4Q6N022 2769 aa1.36□□□□□ -2.19
SMC5-203ENST00000475540 PCNX1Q96RV3 2341 aa1.35□□□□□ -2.19
SMC5-203ENST00000475540 NBEAL1Q6ZS30 2694 aa1.35□□□□□ -2.19
SMC5-203ENST00000475540 PPLO60437 1756 aa1.35□□□□□ -2.19
SMC5-203ENST00000475540 FLNAP21333 2647 aaKnown RBP1.35□□□□□ -2.19
SMC5-203ENST00000475540 PEA15Q15121 130 aa1.35□□□□□ -2.19
SMC5-203ENST00000475540 MYO7BQ6PIF6 2116 aa1.35□□□□□ -2.19
SMC5-203ENST00000475540 FAM103A1Q9BTL3 118 aaKnown RBP1.35□□□□□ -2.19
SMC5-203ENST00000475540 HIGD1BQ9P298 99 aa1.35□□□□□ -2.19
SMC5-203ENST00000475540 RYR3Q15413 4870 aa1.35□□□□□ -2.19
SMC5-203ENST00000475540 CDH23Q9H251 3354 aa1.34□□□□□ -2.19
SMC5-203ENST00000475540 A0A087WVE0 104 aa1.34□□□□□ -2.19
SMC5-203ENST00000475540 C10orf113Q5VZT2 155 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms