RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 FAM74A4Q5TZK3 123 aa4.1□□□□□ -1.75
ECHDC1-215ENST00000475319 Q8N9P0 234 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-215ENST00000475319 PRAC1Q96KF2 57 aa4.1□□□□□ -1.75
ECHDC1-215ENST00000475319 Q9BRP9 147 aa4.1□□□□□ -1.75
ECHDC1-215ENST00000475319 PRR15LQ9BU68 103 aa4.1□□□□□ -1.75
ECHDC1-215ENST00000475319 DEFB126Q9BYW3 111 aa4.1□□□□□ -1.75
ECHDC1-215ENST00000475319 NOTCH2Q04721 2471 aa4.1□□□□□ -1.75
ECHDC1-215ENST00000475319 LRRK2Q5S007 2527 aa4.1□□□□□ -1.75
ECHDC1-215ENST00000475319 NBASA2RRP1 2371 aa4.09□□□□□ -1.75
ECHDC1-215ENST00000475319 FREM2Q5SZK8 3169 aa4.09□□□□□ -1.75
ECHDC1-215ENST00000475319 ZFHX4Q86UP3 3567 aa4.09□□□□□ -1.75
ECHDC1-215ENST00000475319 DSCAMO60469 2012 aa4.09□□□□□ -1.75
ECHDC1-215ENST00000475319 IGLV4-3A0A075B6K6 122 aa4.09□□□□□ -1.75
ECHDC1-215ENST00000475319 A0A1B0GW54 56 aa4.09□□□□□ -1.75
ECHDC1-215ENST00000475319 RPL27AP46776 148 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-215ENST00000475319 RPL39P62891 51 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-215ENST00000475319 ESPL1Q14674 2120 aa4.09□□□□□ -1.75
ECHDC1-215ENST00000475319 C20orf203Q8NBC4 194 aa4.09□□□□□ -1.75
ECHDC1-215ENST00000475319 PATE1Q8WXA2 126 aa4.09□□□□□ -1.75
ECHDC1-215ENST00000475319 CELA1Q9UNI1 258 aa4.09□□□□□ -1.75
ECHDC1-215ENST00000475319 LENEPQ9Y5L5 61 aa4.09□□□□□ -1.75
ECHDC1-215ENST00000475319 SDK2Q58EX2 2172 aa4.08□□□□□ -1.76
ECHDC1-215ENST00000475319 LRCOL1A6NCL2 159 aa4.08□□□□□ -1.76
ECHDC1-215ENST00000475319 C9orf66Q5T8R8 295 aa4.08□□□□□ -1.76
ECHDC1-215ENST00000475319 Q6ZQT0 140 aa4.08□□□□□ -1.76
ECHDC1-215ENST00000475319 Q8TAT8 98 aa4.08□□□□□ -1.76
ECHDC1-215ENST00000475319 TENM4Q6N022 2769 aa4.08□□□□□ -1.76
ECHDC1-215ENST00000475319 SMIM1B2RUZ4 78 aa4.07□□□□□ -1.76
ECHDC1-215ENST00000475319 PRB4P10163 310 aaPredicted RBP4.07□□□□□ -1.76
ECHDC1-215ENST00000475319 DEFB114Q30KQ6 69 aa4.07□□□□□ -1.76
ECHDC1-215ENST00000475319 ZCCHC13Q8WW36 166 aaKnown RBP4.07□□□□□ -1.76
ECHDC1-215ENST00000475319 RETNLBQ9BQ08 111 aa4.07□□□□□ -1.76
ECHDC1-215ENST00000475319 HIGD2AQ9BW72 106 aa4.07□□□□□ -1.76
ECHDC1-215ENST00000475319 ZNF580Q9UK33 172 aa4.07□□□□□ -1.76
ECHDC1-215ENST00000475319 MYO9AB2RTY4 2548 aa4.07□□□□□ -1.76
ECHDC1-215ENST00000475319 TET2Q6N021 2002 aaPredicted RBP4.07□□□□□ -1.76
ECHDC1-215ENST00000475319 ASPMQ8IZT6 3477 aa4.06□□□□□ -1.76
ECHDC1-215ENST00000475319 NACAE9PAV3 2078 aa4.06□□□□□ -1.76
ECHDC1-215ENST00000475319 ZNRF1Q8ND25 227 aa4.06□□□□□ -1.76
ECHDC1-215ENST00000475319 FDCSPQ8NFU4 85 aa4.06□□□□□ -1.76
ECHDC1-215ENST00000475319 SMIM11BQ8TCY0 68 aa4.06□□□□□ -1.76
ECHDC1-215ENST00000475319 KRTAP4-4Q9BYR3 166 aa4.06□□□□□ -1.76
ECHDC1-215ENST00000475319 MGAQ8IWI9 3026 aa4.06□□□□□ -1.76
ECHDC1-215ENST00000475319 FER1L5A0AVI2 2057 aa4.06□□□□□ -1.76
ECHDC1-215ENST00000475319 MYO7BQ6PIF6 2116 aa4.06□□□□□ -1.76
ECHDC1-215ENST00000475319 UBR5O95071 2799 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-215ENST00000475319 IGKV1-17P01599 117 aa4.05□□□□□ -1.76
ECHDC1-215ENST00000475319 IGHV3-48P01763 117 aa4.05□□□□□ -1.76
ECHDC1-215ENST00000475319 CGB3P0DN86 165 aa4.05□□□□□ -1.76
ECHDC1-215ENST00000475319 CGB7P0DN87 165 aa4.05□□□□□ -1.76
ECHDC1-215ENST00000475319 RPL36AP83881 106 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-215ENST00000475319 DEFB110Q30KQ9 67 aa4.05□□□□□ -1.76
ECHDC1-215ENST00000475319 KLK9Q9UKQ9 250 aa4.05□□□□□ -1.76
ECHDC1-215ENST00000475319 COL27A1Q8IZC6 1860 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-215ENST00000475319 ALPK2Q86TB3 2170 aa4.05□□□□□ -1.76
ECHDC1-215ENST00000475319 USP9YO00507 2555 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-215ENST00000475319 ICE1Q9Y2F5 2266 aa4.05□□□□□ -1.76
ECHDC1-215ENST00000475319 IGHV3-20A0A0C4DH32 117 aa4.05□□□□□ -1.76
ECHDC1-215ENST00000475319 NANOS2P60321 138 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-215ENST00000475319 RNASE13Q5GAN3 156 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-215ENST00000475319 SPANXA2-OT1Q8N9U9 137 aa4.05□□□□□ -1.76
ECHDC1-215ENST00000475319 ZNF702PQ9H963 129 aa4.05□□□□□ -1.76
ECHDC1-215ENST00000475319 USP9XQ93008 2570 aaPredicted RBP4.04□□□□□ -1.76
ECHDC1-215ENST00000475319 I3L2K1 104 aa4.04□□□□□ -1.76
ECHDC1-215ENST00000475319 LY6G6DO95868 133 aa4.04□□□□□ -1.76
ECHDC1-215ENST00000475319 LINC00208Q96KT6 92 aa4.04□□□□□ -1.76
ECHDC1-215ENST00000475319 B9D2Q9BPU9 175 aa4.04□□□□□ -1.76
ECHDC1-215ENST00000475319 CACNA1DQ01668 2161 aa4.03□□□□□ -1.76
ECHDC1-215ENST00000475319 MED12Q93074 2177 aa4.03□□□□□ -1.76
ECHDC1-215ENST00000475319 IGHV3-15A0A0B4J1V0 119 aa4.03□□□□□ -1.76
ECHDC1-215ENST00000475319 IGHV3-16A0A0C4DH30 117 aa4.03□□□□□ -1.76
ECHDC1-215ENST00000475319 IGHV3-38A0A0C4DH36 116 aa4.03□□□□□ -1.76
ECHDC1-215ENST00000475319 CYSRT1A8MQ03 144 aa4.03□□□□□ -1.76
ECHDC1-215ENST00000475319 K7EQD1 137 aa4.03□□□□□ -1.76
ECHDC1-215ENST00000475319 LMO4P61968 165 aa4.03□□□□□ -1.76
ECHDC1-215ENST00000475319 BSPH1Q075Z2 132 aa4.03□□□□□ -1.76
ECHDC1-215ENST00000475319 C17orf58Q2M2W7 97 aa4.03□□□□□ -1.76
ECHDC1-215ENST00000475319 Q8N814 137 aa4.03□□□□□ -1.76
ECHDC1-215ENST00000475319 LEAP2Q969E1 77 aa4.03□□□□□ -1.76
ECHDC1-215ENST00000475319 LAMA5O15230 3695 aa4.03□□□□□ -1.76
ECHDC1-215ENST00000475319 LINC00315P59091 139 aa4.02□□□□□ -1.77
ECHDC1-215ENST00000475319 NTM-AS1Q6ZSK4 140 aa4.02□□□□□ -1.77
ECHDC1-215ENST00000475319 SND1-IT1Q9HBX3 110 aa4.02□□□□□ -1.77
ECHDC1-215ENST00000475319 S4R3C0 116 aa4.02□□□□□ -1.77
ECHDC1-215ENST00000475319 FLNCQ14315 2725 aa4.02□□□□□ -1.77
ECHDC1-215ENST00000475319 IGHV3-49A0A0A0MS15 119 aa4.01□□□□□ -1.77
ECHDC1-215ENST00000475319 IGLV2-23P01705 113 aa4.01□□□□□ -1.77
ECHDC1-215ENST00000475319 C11orf71Q6IPW1 123 aa4.01□□□□□ -1.77
ECHDC1-215ENST00000475319 Q6ZTI0 123 aa4.01□□□□□ -1.77
ECHDC1-215ENST00000475319 CHCHD10Q8WYQ3 142 aaPredicted RBP4.01□□□□□ -1.77
ECHDC1-215ENST00000475319 XAGE1AQ9HD64 81 aa4.01□□□□□ -1.77
ECHDC1-215ENST00000475319 LINC01558Q9Y6Z2 57 aa4.01□□□□□ -1.77
ECHDC1-215ENST00000475319 ATMQ13315 3056 aa4.01□□□□□ -1.77
ECHDC1-215ENST00000475319 SEC16AO15027 2179 aa4.01□□□□□ -1.77
ECHDC1-215ENST00000475319 SMG1Q96Q15 3661 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-215ENST00000475319 LOC400499M0QZD8 3231 aa4.01□□□□□ -1.77
ECHDC1-215ENST00000475319 DIDO1Q9BTC0 2240 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-215ENST00000475319 IGKV2-28A0A075B6P5 120 aa4□□□□□ -1.77
ECHDC1-215ENST00000475319 IGKV3D-15A0A087WSY6 115 aa4□□□□□ -1.77
ECHDC1-215ENST00000475319 IGHV3-73A0A0B4J1V6 119 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 311.7 ms