RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 ORAOV1Q8WV07 137 aa8.93□□□□□ -0.98
RTN1-205ENST00000474911 MIEN1Q9BRT3 115 aa8.93□□□□□ -0.98
RTN1-205ENST00000474911 TTTY13Q9BZ97 58 aa8.93□□□□□ -0.98
RTN1-205ENST00000474911 MYMXA0A1B0GTQ4 84 aa8.92□□□□□ -0.98
RTN1-205ENST00000474911 ZNF815PA8K554 130 aa8.92□□□□□ -0.98
RTN1-205ENST00000474911 PRSS2P07478 247 aa8.92□□□□□ -0.98
RTN1-205ENST00000474911 TOMM7Q9P0U1 55 aa8.92□□□□□ -0.98
RTN1-205ENST00000474911 Q6ZRN7 208 aaPredicted RBP8.91□□□□□ -0.98
RTN1-205ENST00000474911 Q8IZM0 81 aa8.91□□□□□ -0.98
RTN1-205ENST00000474911 MAPKAPK5-AS1Q8N8E1 139 aa8.91□□□□□ -0.98
RTN1-205ENST00000474911 NDUFA12Q9UI09 145 aa8.91□□□□□ -0.98
RTN1-205ENST00000474911 CFAP161Q6P656 301 aa8.9□□□□□ -0.98
RTN1-205ENST00000474911 NDUFA1O15239 70 aa8.89□□□□□ -0.99
RTN1-205ENST00000474911 SPAG11BQ08648 103 aa8.89□□□□□ -0.99
RTN1-205ENST00000474911 C6orf226Q5I0X4 101 aa8.89□□□□□ -0.99
RTN1-205ENST00000474911 SFTA2Q6UW10 78 aa8.89□□□□□ -0.99
RTN1-205ENST00000474911 TP73-AS1Q9UF72 201 aa8.89□□□□□ -0.99
RTN1-205ENST00000474911 CXCL5P42830 114 aa8.88□□□□□ -0.99
RTN1-205ENST00000474911 ZNF625Q96I27 306 aaPredicted RBP8.88□□□□□ -0.99
RTN1-205ENST00000474911 PSCAO43653 123 aa8.88□□□□□ -0.99
RTN1-205ENST00000474911 DDTP30046 118 aa8.88□□□□□ -0.99
RTN1-205ENST00000474911 HNRNPA3P51991 378 aaKnown RBP8.88□□□□□ -0.99
RTN1-205ENST00000474911 HERV-K104P63124 156 aa8.88□□□□□ -0.99
RTN1-205ENST00000474911 KIAA0087Q14695 138 aa8.88□□□□□ -0.99
RTN1-205ENST00000474911 SCGB1D4Q6XE38 83 aa8.88□□□□□ -0.99
RTN1-205ENST00000474911 C15orf56Q8N910 161 aa8.88□□□□□ -0.99
RTN1-205ENST00000474911 GVQW2A0A096LPI5 108 aaPredicted RBP8.87□□□□□ -0.99
RTN1-205ENST00000474911 CKS1BP61024 79 aa8.87□□□□□ -0.99
RTN1-205ENST00000474911 DNAH11Q96DT5 4516 aa8.86□□□□□ -0.99
RTN1-205ENST00000474911 PCP4L1A6NKN8 68 aa8.86□□□□□ -0.99
RTN1-205ENST00000474911 C16orf90A8MZG2 172 aa8.86□□□□□ -0.99
RTN1-205ENST00000474911 USP17L23D6RBM5 183 aa8.86□□□□□ -0.99
RTN1-205ENST00000474911 ZNF561-AS1K7EIQ3 104 aa8.86□□□□□ -0.99
RTN1-205ENST00000474911 C2orf91Q6ZV80 131 aa8.86□□□□□ -0.99
RTN1-205ENST00000474911 HIGD1BQ9P298 99 aa8.86□□□□□ -0.99
RTN1-205ENST00000474911 KIAA1109Q2LD37 5005 aa8.85□□□□□ -0.99
RTN1-205ENST00000474911 A0A0J9YXY3 114 aa8.85□□□□□ -0.99
RTN1-205ENST00000474911 HIGD2BQ4VC39 106 aa8.85□□□□□ -0.99
RTN1-205ENST00000474911 HERC2O95714 4834 aa8.84□□□□□ -0.99
RTN1-205ENST00000474911 F8WDY8 70 aa8.84□□□□□ -0.99
RTN1-205ENST00000474911 C2orf82Q6UX34 121 aa8.84□□□□□ -0.99
RTN1-205ENST00000474911 NTN5Q8WTR8 489 aaPredicted RBP8.84□□□□□ -0.99
RTN1-205ENST00000474911 C2orf48Q96LS8 159 aa8.84□□□□□ -0.99
RTN1-205ENST00000474911 DYNC1H1Q14204 4646 aaKnown RBP8.84□□□□□ -1
RTN1-205ENST00000474911 LORP23490 312 aaPredicted RBP8.83□□□□□ -1
RTN1-205ENST00000474911 LINC00587B1AMM8 73 aa8.82□□□□□ -1
RTN1-205ENST00000474911 TMEM238C9JI98 176 aa8.82□□□□□ -1
RTN1-205ENST00000474911 EREGO14944 169 aa8.82□□□□□ -1
RTN1-205ENST00000474911 TIMM17BO60830 172 aa8.82□□□□□ -1
RTN1-205ENST00000474911 KRTAP10-2P60368 255 aa8.82□□□□□ -1
RTN1-205ENST00000474911 LINC00526Q96FQ7 95 aa8.82□□□□□ -1
RTN1-205ENST00000474911 CDK2AP2O75956 126 aa8.81□□□□□ -1
RTN1-205ENST00000474911 CIRBPQ14011 172 aaKnown RBP8.81□□□□□ -1
RTN1-205ENST00000474911 C14orf177Q52M58 125 aa8.81□□□□□ -1
RTN1-205ENST00000474911 MEIG1Q5JSS6 88 aa8.81□□□□□ -1
RTN1-205ENST00000474911 CAMK2N2Q96S95 79 aa8.81□□□□□ -1
RTN1-205ENST00000474911 SPANXB1Q9NS25 103 aaPredicted RBP8.81□□□□□ -1
RTN1-205ENST00000474911 PGPEP1Q9NXJ5 209 aa8.81□□□□□ -1
RTN1-205ENST00000474911 A0A087WTM6 91 aa8.8□□□□□ -1
RTN1-205ENST00000474911 LECT2O14960 151 aa8.8□□□□□ -1
RTN1-205ENST00000474911 UNQ6190/PRO20217Q6UXQ8 127 aa8.8□□□□□ -1
RTN1-205ENST00000474911 CTAG1AP78358 180 aa8.8□□□□□ -1
RTN1-205ENST00000474911 HSD52Q0P140 79 aa8.8□□□□□ -1
RTN1-205ENST00000474911 WFDC2Q14508 124 aa8.8□□□□□ -1
RTN1-205ENST00000474911 TAL2Q16559 108 aa8.8□□□□□ -1
RTN1-205ENST00000474911 LITAFQ99732 161 aa8.8□□□□□ -1
RTN1-205ENST00000474911 ERG28Q9UKR5 140 aa8.8□□□□□ -1
RTN1-205ENST00000474911 TRBV30A0A0K0K1B3 111 aa8.79□□□□□ -1
RTN1-205ENST00000474911 SYCNQ0VAF6 134 aa8.79□□□□□ -1
RTN1-205ENST00000474911 SRSF9Q13242 221 aaKnown RBP eCLIP8.79□□□□□ -1
RTN1-205ENST00000474911 C10orf25Q5T742 122 aa8.79□□□□□ -1
RTN1-205ENST00000474911 LINC00528Q8N1L1 170 aa8.79□□□□□ -1
RTN1-205ENST00000474911 HIST1H4GQ99525 98 aa8.79□□□□□ -1
RTN1-205ENST00000474911 LRCOL1A6NCL2 159 aa8.78□□□□□ -1
RTN1-205ENST00000474911 SMIM13P0DJ93 91 aa8.78□□□□□ -1
RTN1-205ENST00000474911 COX17Q14061 63 aa8.78□□□□□ -1
RTN1-205ENST00000474911 Q6ZRU5 148 aa8.78□□□□□ -1
RTN1-205ENST00000474911 Q6ZVH6 145 aa8.78□□□□□ -1
RTN1-205ENST00000474911 SPANXDQ9BXN6 97 aa8.78□□□□□ -1
RTN1-205ENST00000474911 SPANXCQ9NY87 97 aa8.78□□□□□ -1
RTN1-205ENST00000474911 LINC00158P58513 81 aa8.77□□□□□ -1.01
RTN1-205ENST00000474911 C6orf48Q9UBA6 75 aa8.77□□□□□ -1.01
RTN1-205ENST00000474911 A0A0U1RRA0 63 aa8.76□□□□□ -1.01
RTN1-205ENST00000474911 M0R143 59 aa8.76□□□□□ -1.01
RTN1-205ENST00000474911 PFN2P35080 140 aa8.76□□□□□ -1.01
RTN1-205ENST00000474911 ADAMTSL4-AS1Q5T5F5 129 aa8.76□□□□□ -1.01
RTN1-205ENST00000474911 CARD19Q96LW7 228 aa8.76□□□□□ -1.01
RTN1-205ENST00000474911 LRP1BQ9NZR2 4599 aa8.75□□□□□ -1.01
RTN1-205ENST00000474911 RNF151Q2KHN1 245 aa8.75□□□□□ -1.01
RTN1-205ENST00000474911 C9orf116Q5BN46 136 aaPredicted RBP8.75□□□□□ -1.01
RTN1-205ENST00000474911 COPS9Q8WXC6 57 aa8.75□□□□□ -1.01
RTN1-205ENST00000474911 RYR1P21817 5038 aa8.74□□□□□ -1.01
RTN1-205ENST00000474911 SLPIP03973 132 aa8.74□□□□□ -1.01
RTN1-205ENST00000474911 IFITM1P13164 125 aa8.74□□□□□ -1.01
RTN1-205ENST00000474911 CEND1Q8N111 149 aa8.74□□□□□ -1.01
RTN1-205ENST00000474911 MIR7-3HGQ8N6C7 128 aa8.74□□□□□ -1.01
RTN1-205ENST00000474911 DAND5Q8N907 189 aa8.74□□□□□ -1.01
RTN1-205ENST00000474911 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.73□□□□□ -1.01
RTN1-205ENST00000474911 GCSHP23434 173 aa8.73□□□□□ -1.01
RTN1-205ENST00000474911 HINT1P49773 126 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms