RNA–Protein interactions for RNA: ENST00000474843.1

SRRM1-210, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-210ENST00000474843 IGIPA6NJ69 53 aa3.37□□□□□ -1.87
SRRM1-210ENST00000474843 HBDP02042 147 aa3.37□□□□□ -1.87
SRRM1-210ENST00000474843 TEX43Q6ZNM6 134 aa3.37□□□□□ -1.87
SRRM1-210ENST00000474843 CEND1Q8N111 149 aa3.37□□□□□ -1.87
SRRM1-210ENST00000474843 C2orf88Q9BSF0 95 aa3.37□□□□□ -1.87
SRRM1-210ENST00000474843 IGKV2D-24A0A075B6R9 120 aa3.36□□□□□ -1.87
SRRM1-210ENST00000474843 HIST1H2BKO60814 126 aa3.36□□□□□ -1.87
SRRM1-210ENST00000474843 HIST1H2BJP06899 126 aa3.36□□□□□ -1.87
SRRM1-210ENST00000474843 HIST1H2BOP23527 126 aa3.36□□□□□ -1.87
SRRM1-210ENST00000474843 HIST1H2BBP33778 126 aa3.36□□□□□ -1.87
SRRM1-210ENST00000474843 NDUFA6P56556 154 aa3.36□□□□□ -1.87
SRRM1-210ENST00000474843 HIST1H2BDP58876 126 aa3.36□□□□□ -1.87
SRRM1-210ENST00000474843 HIST1H2BCP62807 126 aa3.36□□□□□ -1.87
SRRM1-210ENST00000474843 RPL39P62891 51 aaKnown RBP3.36□□□□□ -1.87
SRRM1-210ENST00000474843 PMVKQ15126 192 aa3.36□□□□□ -1.87
SRRM1-210ENST00000474843 HIST2H2BEQ16778 126 aa3.36□□□□□ -1.87
SRRM1-210ENST00000474843 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.36□□□□□ -1.87
SRRM1-210ENST00000474843 HIST1H2BHQ93079 126 aa3.36□□□□□ -1.87
SRRM1-210ENST00000474843 PACRGQ96M98 296 aaPredicted RBP3.36□□□□□ -1.87
SRRM1-210ENST00000474843 AMELXQ99217 191 aa3.36□□□□□ -1.87
SRRM1-210ENST00000474843 HIST1H2BNQ99877 126 aa3.36□□□□□ -1.87
SRRM1-210ENST00000474843 HIST1H2BMQ99879 126 aa3.36□□□□□ -1.87
SRRM1-210ENST00000474843 ANAPC11Q9NYG5 84 aa3.36□□□□□ -1.87
SRRM1-210ENST00000474843 HSPB8Q9UJY1 196 aa3.36□□□□□ -1.87
SRRM1-210ENST00000474843 STAB2Q8WWQ8 2551 aa3.36□□□□□ -1.87
SRRM1-210ENST00000474843 IGKV3OR2-268A0A0C4DH90 116 aa3.35□□□□□ -1.87
SRRM1-210ENST00000474843 LEPROTL1O95214 131 aa3.35□□□□□ -1.87
SRRM1-210ENST00000474843 APOMO95445 188 aa3.35□□□□□ -1.87
SRRM1-210ENST00000474843 S100A6P06703 90 aa3.35□□□□□ -1.87
SRRM1-210ENST00000474843 PDZD11Q5EBL8 140 aa3.35□□□□□ -1.87
SRRM1-210ENST00000474843 COA6Q5JTJ3 125 aaKnown RBP3.35□□□□□ -1.87
SRRM1-210ENST00000474843 FAM19A3Q7Z5A8 133 aa3.35□□□□□ -1.87
SRRM1-210ENST00000474843 LINC01561Q8N1V8 128 aa3.35□□□□□ -1.87
SRRM1-210ENST00000474843 CHCHD10Q8WYQ3 142 aaPredicted RBP3.35□□□□□ -1.87
SRRM1-210ENST00000474843 CSMD3Q7Z407 3707 aa3.35□□□□□ -1.87
SRRM1-210ENST00000474843 TENM2Q9NT68 2774 aa3.34□□□□□ -1.87
SRRM1-210ENST00000474843 TRAV13-1A0A0B4J241 112 aa3.34□□□□□ -1.87
SRRM1-210ENST00000474843 TINCRA0A1B0GVN0 87 aa3.34□□□□□ -1.87
SRRM1-210ENST00000474843 F8WDY8 70 aa3.34□□□□□ -1.87
SRRM1-210ENST00000474843 RTL8CO15255 209 aa3.34□□□□□ -1.87
SRRM1-210ENST00000474843 SERF1AO75920 110 aa3.34□□□□□ -1.87
SRRM1-210ENST00000474843 AKR1D1P51857 326 aa3.34□□□□□ -1.87
SRRM1-210ENST00000474843 HERVK_113P63121 156 aa3.34□□□□□ -1.87
SRRM1-210ENST00000474843 IFI27L1Q96BM0 104 aa3.34□□□□□ -1.87
SRRM1-210ENST00000474843 MAP1LC3CQ9BXW4 147 aa3.34□□□□□ -1.87
SRRM1-210ENST00000474843 CST9LQ9H4G1 147 aa3.34□□□□□ -1.87
SRRM1-210ENST00000474843 GEMIN7Q9H840 131 aaKnown RBP3.34□□□□□ -1.87
SRRM1-210ENST00000474843 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
SRRM1-210ENST00000474843 IGLV10-54A0A075B6I4 117 aa3.33□□□□□ -1.88
SRRM1-210ENST00000474843 A0A096LNJ9 63 aa3.33□□□□□ -1.88
SRRM1-210ENST00000474843 TRAV12-1A0A0B4J245 112 aa3.33□□□□□ -1.88
SRRM1-210ENST00000474843 IGHV3OR16-9A0A0B4J2B5 98 aa3.33□□□□□ -1.88
SRRM1-210ENST00000474843 IGHV1-58A0A0C4DH39 117 aa3.33□□□□□ -1.88
SRRM1-210ENST00000474843 COX7A2LO14548 114 aa3.33□□□□□ -1.88
SRRM1-210ENST00000474843 S100A2P29034 98 aa3.33□□□□□ -1.88
SRRM1-210ENST00000474843 UBE2D1P51668 147 aa3.33□□□□□ -1.88
SRRM1-210ENST00000474843 PMCHL1Q16048 86 aa3.33□□□□□ -1.88
SRRM1-210ENST00000474843 KRTAP26-1Q6PEX3 210 aa3.33□□□□□ -1.88
SRRM1-210ENST00000474843 CLPSL2Q6UWE3 100 aa3.33□□□□□ -1.88
SRRM1-210ENST00000474843 Q6ZRN7 208 aaPredicted RBP3.33□□□□□ -1.88
SRRM1-210ENST00000474843 Q6ZUT4 128 aa3.33□□□□□ -1.88
SRRM1-210ENST00000474843 FAM19A2Q8N3H0 131 aa3.33□□□□□ -1.88
SRRM1-210ENST00000474843 BAALCQ8WXS3 180 aa3.33□□□□□ -1.88
SRRM1-210ENST00000474843 FAM104AQ969W3 186 aa3.33□□□□□ -1.88
SRRM1-210ENST00000474843 A0A087WTM6 91 aa3.32□□□□□ -1.88
SRRM1-210ENST00000474843 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.32□□□□□ -1.88
SRRM1-210ENST00000474843 LRCOL1A6NCL2 159 aa3.32□□□□□ -1.88
SRRM1-210ENST00000474843 H0Y9J4 135 aa3.32□□□□□ -1.88
SRRM1-210ENST00000474843 H3BRM9 83 aa3.32□□□□□ -1.88
SRRM1-210ENST00000474843 NUPR1O60356 82 aa3.32□□□□□ -1.88
SRRM1-210ENST00000474843 FABP4P15090 132 aa3.32□□□□□ -1.88
SRRM1-210ENST00000474843 XCL1P47992 114 aa3.32□□□□□ -1.88
SRRM1-210ENST00000474843 RNASE13Q5GAN3 156 aaKnown RBP3.32□□□□□ -1.88
SRRM1-210ENST00000474843 SPATA12Q7Z6I5 190 aa3.32□□□□□ -1.88
SRRM1-210ENST00000474843 PKIGQ9Y2B9 76 aa3.32□□□□□ -1.88
SRRM1-210ENST00000474843 CHTOPQ9Y3Y2 248 aaKnown RBP3.32□□□□□ -1.88
SRRM1-210ENST00000474843 A0A0J9YXV3 536 aa3.31□□□□□ -1.88
SRRM1-210ENST00000474843 E9PLD3 99 aa3.31□□□□□ -1.88
SRRM1-210ENST00000474843 F8VRH5 84 aa3.31□□□□□ -1.88
SRRM1-210ENST00000474843 C6orf226Q5I0X4 101 aa3.31□□□□□ -1.88
SRRM1-210ENST00000474843 LINC00173Q6ZV60 143 aa3.31□□□□□ -1.88
SRRM1-210ENST00000474843 C5orf38Q86SI9 138 aa3.31□□□□□ -1.88
SRRM1-210ENST00000474843 Q8N814 137 aa3.31□□□□□ -1.88
SRRM1-210ENST00000474843 OR10D4PQ8NGN7 298 aa3.31□□□□□ -1.88
SRRM1-210ENST00000474843 DNAH7Q8WXX0 4024 aa3.3□□□□□ -1.88
SRRM1-210ENST00000474843 IGHV3-64A0A075B6Q5 118 aa3.3□□□□□ -1.88
SRRM1-210ENST00000474843 IGLC3P0DOY3 106 aa3.3□□□□□ -1.88
SRRM1-210ENST00000474843 PLNP26678 52 aa3.3□□□□□ -1.88
SRRM1-210ENST00000474843 COX6A2Q02221 97 aa3.3□□□□□ -1.88
SRRM1-210ENST00000474843 SFTA2Q6UW10 78 aa3.3□□□□□ -1.88
SRRM1-210ENST00000474843 CDKN2A-AS1Q9UH64 79 aa3.3□□□□□ -1.88
SRRM1-210ENST00000474843 IGLV4-69A0A075B6H9 119 aa3.29□□□□□ -1.88
SRRM1-210ENST00000474843 GVQW2A0A096LPI5 108 aaPredicted RBP3.29□□□□□ -1.88
SRRM1-210ENST00000474843 C20orf202A1L168 122 aa3.29□□□□□ -1.88
SRRM1-210ENST00000474843 SYS1-DBNDD2H3BUS1 97 aa3.29□□□□□ -1.88
SRRM1-210ENST00000474843 DPM2O94777 84 aa3.29□□□□□ -1.88
SRRM1-210ENST00000474843 IGKCP01834 107 aa3.29□□□□□ -1.88
SRRM1-210ENST00000474843 CXCL5P42830 114 aa3.29□□□□□ -1.88
SRRM1-210ENST00000474843 CKS1BP61024 79 aa3.29□□□□□ -1.88
SRRM1-210ENST00000474843 CNBPP62633 177 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms