RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 PRKDCP78527 4128 aaKnown RBP6.88□□□□□ -1.31
COL12A1-206ENST00000474564 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.88□□□□□ -1.31
COL12A1-206ENST00000474564 IGLV5-39A0A0G2JS06 123 aa6.88□□□□□ -1.31
COL12A1-206ENST00000474564 TMEM238LA0A1B0GVL6 79 aa6.88□□□□□ -1.31
COL12A1-206ENST00000474564 A6NJY4 79 aa6.88□□□□□ -1.31
COL12A1-206ENST00000474564 NDUFA1O15239 70 aa6.88□□□□□ -1.31
COL12A1-206ENST00000474564 TAL2Q16559 108 aa6.88□□□□□ -1.31
COL12A1-206ENST00000474564 KRTAP26-1Q6PEX3 210 aa6.88□□□□□ -1.31
COL12A1-206ENST00000474564 C2orf48Q96LS8 159 aa6.88□□□□□ -1.31
COL12A1-206ENST00000474564 PKIGQ9Y2B9 76 aa6.88□□□□□ -1.31
COL12A1-206ENST00000474564 CAMK2N2Q96S95 79 aa6.87□□□□□ -1.31
COL12A1-206ENST00000474564 GVQW2A0A096LPI5 108 aaPredicted RBP6.86□□□□□ -1.31
COL12A1-206ENST00000474564 A0A0J9YXY3 114 aa6.86□□□□□ -1.31
COL12A1-206ENST00000474564 HIGD2BQ4VC39 106 aa6.86□□□□□ -1.31
COL12A1-206ENST00000474564 COL5A1-AS1Q5SY13 56 aa6.86□□□□□ -1.31
COL12A1-206ENST00000474564 COPS9Q8WXC6 57 aa6.86□□□□□ -1.31
COL12A1-206ENST00000474564 ZNF625Q96I27 306 aaPredicted RBP6.86□□□□□ -1.31
COL12A1-206ENST00000474564 SNHG12Q9BXW3 62 aa6.86□□□□□ -1.31
COL12A1-206ENST00000474564 SYCNQ0VAF6 134 aa6.85□□□□□ -1.31
COL12A1-206ENST00000474564 LBHQ53QV2 105 aaPredicted RBP6.85□□□□□ -1.31
COL12A1-206ENST00000474564 BVES-AS1Q5T3Y7 98 aa6.85□□□□□ -1.31
COL12A1-206ENST00000474564 LINC00336Q6ZUF6 198 aa6.85□□□□□ -1.31
COL12A1-206ENST00000474564 CEND1Q8N111 149 aa6.85□□□□□ -1.31
COL12A1-206ENST00000474564 SPANXB1Q9NS25 103 aaPredicted RBP6.85□□□□□ -1.31
COL12A1-206ENST00000474564 TGP01266 2768 aa6.85□□□□□ -1.31
COL12A1-206ENST00000474564 A0A0U1RRA0 63 aa6.84□□□□□ -1.31
COL12A1-206ENST00000474564 LECT2O14960 151 aa6.84□□□□□ -1.31
COL12A1-206ENST00000474564 RPL24P83731 157 aaKnown RBP6.84□□□□□ -1.31
COL12A1-206ENST00000474564 C15orf56Q8N910 161 aa6.84□□□□□ -1.31
COL12A1-206ENST00000474564 NTN5Q8WTR8 489 aaPredicted RBP6.84□□□□□ -1.31
COL12A1-206ENST00000474564 TRBV30A0A0K0K1B3 111 aa6.83□□□□□ -1.32
COL12A1-206ENST00000474564 LINC00158P58513 81 aa6.83□□□□□ -1.32
COL12A1-206ENST00000474564 Q6ZRN7 208 aaPredicted RBP6.83□□□□□ -1.32
COL12A1-206ENST00000474564 CARD19Q96LW7 228 aa6.83□□□□□ -1.32
COL12A1-206ENST00000474564 A0A087WTM6 91 aa6.82□□□□□ -1.32
COL12A1-206ENST00000474564 TIMM17BO60830 172 aa6.82□□□□□ -1.32
COL12A1-206ENST00000474564 NPC2P61916 151 aa6.82□□□□□ -1.32
COL12A1-206ENST00000474564 COX17Q14061 63 aa6.82□□□□□ -1.32
COL12A1-206ENST00000474564 RNF151Q2KHN1 245 aa6.82□□□□□ -1.32
COL12A1-206ENST00000474564 NHP2Q9NX24 153 aaKnown RBP6.82□□□□□ -1.32
COL12A1-206ENST00000474564 SMIM13P0DJ93 91 aa6.81□□□□□ -1.32
COL12A1-206ENST00000474564 PFN2P35080 140 aa6.81□□□□□ -1.32
COL12A1-206ENST00000474564 KIAA0087Q14695 138 aa6.81□□□□□ -1.32
COL12A1-206ENST00000474564 C2orf82Q6UX34 121 aa6.81□□□□□ -1.32
COL12A1-206ENST00000474564 Q6ZVH6 145 aa6.81□□□□□ -1.32
COL12A1-206ENST00000474564 Q8N814 137 aa6.81□□□□□ -1.32
COL12A1-206ENST00000474564 RAB37Q96AX2 223 aa6.81□□□□□ -1.32
COL12A1-206ENST00000474564 SPANXDQ9BXN6 97 aa6.81□□□□□ -1.32
COL12A1-206ENST00000474564 SPANXCQ9NY87 97 aa6.81□□□□□ -1.32
COL12A1-206ENST00000474564 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.8□□□□□ -1.32
COL12A1-206ENST00000474564 LRCOL1A6NCL2 159 aa6.8□□□□□ -1.32
COL12A1-206ENST00000474564 IFITM1P13164 125 aa6.8□□□□□ -1.32
COL12A1-206ENST00000474564 FXYD2P54710 66 aa6.8□□□□□ -1.32
COL12A1-206ENST00000474564 UNQ6190/PRO20217Q6UXQ8 127 aa6.8□□□□□ -1.32
COL12A1-206ENST00000474564 LINC00526Q96FQ7 95 aa6.8□□□□□ -1.32
COL12A1-206ENST00000474564 CNBPP62633 177 aaKnown RBP6.79□□□□□ -1.32
COL12A1-206ENST00000474564 MUSTN1Q8IVN3 82 aa6.79□□□□□ -1.32
COL12A1-206ENST00000474564 PGPEP1Q9NXJ5 209 aa6.79□□□□□ -1.32
COL12A1-206ENST00000474564 ERG28Q9UKR5 140 aa6.79□□□□□ -1.32
COL12A1-206ENST00000474564 LOC107984640A0A0U1RRK4 108 aa6.78□□□□□ -1.32
COL12A1-206ENST00000474564 Q1RN00 199 aa6.78□□□□□ -1.32
COL12A1-206ENST00000474564 Q6ZRU5 148 aa6.78□□□□□ -1.32
COL12A1-206ENST00000474564 DAND5Q8N907 189 aa6.78□□□□□ -1.32
COL12A1-206ENST00000474564 IGLV5-52A0A0A0MRZ9 124 aa6.77□□□□□ -1.33
COL12A1-206ENST00000474564 RTL8CO15255 209 aa6.77□□□□□ -1.33
COL12A1-206ENST00000474564 TNP2Q05952 138 aa6.77□□□□□ -1.33
COL12A1-206ENST00000474564 MIR7-3HGQ8N6C7 128 aa6.77□□□□□ -1.33
COL12A1-206ENST00000474564 A4D1N5 150 aa6.76□□□□□ -1.33
COL12A1-206ENST00000474564 NDUFC2-KCTD14E9PQ53 114 aa6.76□□□□□ -1.33
COL12A1-206ENST00000474564 RPL18AQ02543 176 aaKnown RBP6.76□□□□□ -1.33
COL12A1-206ENST00000474564 DPH3Q96FX2 82 aa6.76□□□□□ -1.33
COL12A1-206ENST00000474564 LINC00474Q9P2X8 69 aa6.76□□□□□ -1.33
COL12A1-206ENST00000474564 C6orf48Q9UBA6 75 aa6.76□□□□□ -1.33
COL12A1-206ENST00000474564 TENM2Q9NT68 2774 aa6.75□□□□□ -1.33
COL12A1-206ENST00000474564 K7ERJ3 54 aa6.75□□□□□ -1.33
COL12A1-206ENST00000474564 WFDC2Q14508 124 aa6.75□□□□□ -1.33
COL12A1-206ENST00000474564 ADAMTSL4-AS1Q5T5F5 129 aa6.75□□□□□ -1.33
COL12A1-206ENST00000474564 C10orf25Q5T742 122 aa6.75□□□□□ -1.33
COL12A1-206ENST00000474564 C9orf163Q8N9P6 203 aa6.75□□□□□ -1.33
COL12A1-206ENST00000474564 LINC00308Q8TCZ7 52 aa6.75□□□□□ -1.33
COL12A1-206ENST00000474564 A0A1B0GV90 55 aa6.74□□□□□ -1.33
COL12A1-206ENST00000474564 LITAFQ99732 161 aa6.74□□□□□ -1.33
COL12A1-206ENST00000474564 H3BUT2 72 aa6.73□□□□□ -1.33
COL12A1-206ENST00000474564 H7C2G1 150 aa6.73□□□□□ -1.33
COL12A1-206ENST00000474564 TLX1NBP0CAT3 122 aa6.73□□□□□ -1.33
COL12A1-206ENST00000474564 PSMB2P49721 201 aa6.73□□□□□ -1.33
COL12A1-206ENST00000474564 GAGE2BQ13066 116 aa6.73□□□□□ -1.33
COL12A1-206ENST00000474564 VAMP3Q15836 100 aa6.73□□□□□ -1.33
COL12A1-206ENST00000474564 GAGE2EQ4V326 116 aa6.73□□□□□ -1.33
COL12A1-206ENST00000474564 C9orf116Q5BN46 136 aaPredicted RBP6.73□□□□□ -1.33
COL12A1-206ENST00000474564 LYRM7Q5U5X0 104 aa6.73□□□□□ -1.33
COL12A1-206ENST00000474564 GAGE2DQ9UEU5 116 aa6.73□□□□□ -1.33
COL12A1-206ENST00000474564 A0A0B4J2C4 111 aa6.72□□□□□ -1.33
COL12A1-206ENST00000474564 TAX1BP3O14907 124 aa6.72□□□□□ -1.33
COL12A1-206ENST00000474564 SND1-IT1Q9HBX3 110 aa6.72□□□□□ -1.33
COL12A1-206ENST00000474564 PRO1854Q9UHT4 67 aa6.72□□□□□ -1.33
COL12A1-206ENST00000474564 C9orf118A6NHY6 69 aa6.71□□□□□ -1.34
COL12A1-206ENST00000474564 C16orf90A8MZG2 172 aa6.71□□□□□ -1.34
COL12A1-206ENST00000474564 SLPIP03973 132 aa6.71□□□□□ -1.34
COL12A1-206ENST00000474564 FABP2P12104 132 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms