RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 SMIM9A6NGZ8 99 aa5.75□□□□□ -1.49
CCDC93-208ENST00000474546 F5H768 121 aa5.75□□□□□ -1.49
CCDC93-208ENST00000474546 ATP5EP56381 51 aaPredicted RBP5.75□□□□□ -1.49
CCDC93-208ENST00000474546 DEFB131AP59861 70 aa5.75□□□□□ -1.49
CCDC93-208ENST00000474546 NPC2P61916 151 aa5.75□□□□□ -1.49
CCDC93-208ENST00000474546 COX17Q14061 63 aa5.75□□□□□ -1.49
CCDC93-208ENST00000474546 LINC01356Q8N9X3 169 aa5.75□□□□□ -1.49
CCDC93-208ENST00000474546 NOTCH3Q9UM47 2321 aa5.75□□□□□ -1.49
CCDC93-208ENST00000474546 NDUFC1O43677 76 aa5.74□□□□□ -1.49
CCDC93-208ENST00000474546 CCKP06307 115 aa5.74□□□□□ -1.49
CCDC93-208ENST00000474546 IGHV4-38-2P0DP08 117 aa5.74□□□□□ -1.49
CCDC93-208ENST00000474546 IL17DQ8TAD2 202 aa5.74□□□□□ -1.49
CCDC93-208ENST00000474546 MRAPQ8TCY5 172 aa5.74□□□□□ -1.49
CCDC93-208ENST00000474546 SMCR5Q8TEV8 140 aa5.74□□□□□ -1.49
CCDC93-208ENST00000474546 C4orf3Q8WVX3 66 aa5.74□□□□□ -1.49
CCDC93-208ENST00000474546 C2orf48Q96LS8 159 aa5.74□□□□□ -1.49
CCDC93-208ENST00000474546 UBL5Q9BZL1 73 aa5.74□□□□□ -1.49
CCDC93-208ENST00000474546 IGHV4-61A0A0C4DH41 118 aa5.73□□□□□ -1.49
CCDC93-208ENST00000474546 ATP5J2P56134 94 aa5.73□□□□□ -1.49
CCDC93-208ENST00000474546 CEMP1Q6PRD7 247 aaPredicted RBP5.73□□□□□ -1.49
CCDC93-208ENST00000474546 C16orf74Q96GX8 76 aa5.73□□□□□ -1.49
CCDC93-208ENST00000474546 LINC00167Q96N53 147 aa5.73□□□□□ -1.49
CCDC93-208ENST00000474546 CR1P17927 2039 aa5.73□□□□□ -1.49
CCDC93-208ENST00000474546 DYNC2H1Q8NCM8 4307 aaKnown RBP5.73□□□□□ -1.49
CCDC93-208ENST00000474546 DNAH1Q9P2D7 4330 aa5.73□□□□□ -1.49
CCDC93-208ENST00000474546 A0A087WZ39 114 aa5.72□□□□□ -1.49
CCDC93-208ENST00000474546 IGHV3-73A0A0B4J1V6 119 aa5.72□□□□□ -1.49
CCDC93-208ENST00000474546 TRAV13-1A0A0B4J241 112 aa5.72□□□□□ -1.49
CCDC93-208ENST00000474546 LOC107984640A0A0U1RRK4 108 aa5.72□□□□□ -1.49
CCDC93-208ENST00000474546 USP17L23D6RBM5 183 aa5.72□□□□□ -1.49
CCDC93-208ENST00000474546 LINC00158P58513 81 aa5.72□□□□□ -1.49
CCDC93-208ENST00000474546 STHQ8IWL8 128 aa5.72□□□□□ -1.49
CCDC93-208ENST00000474546 Q8N2B8 174 aa5.72□□□□□ -1.49
CCDC93-208ENST00000474546 MIR7-3HGQ8N6C7 128 aa5.72□□□□□ -1.49
CCDC93-208ENST00000474546 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.72□□□□□ -1.49
CCDC93-208ENST00000474546 MAP6D1Q9H9H5 199 aa5.72□□□□□ -1.49
CCDC93-208ENST00000474546 TENM2Q9NT68 2774 aa5.72□□□□□ -1.49
CCDC93-208ENST00000474546 KNCNA6PVL3 124 aa5.71□□□□□ -1.5
CCDC93-208ENST00000474546 IGHV4-59P01825 116 aa5.71□□□□□ -1.5
CCDC93-208ENST00000474546 HTN1P15515 57 aa5.71□□□□□ -1.5
CCDC93-208ENST00000474546 RNASE13Q5GAN3 156 aaKnown RBP5.71□□□□□ -1.5
CCDC93-208ENST00000474546 SOSTDC1Q6X4U4 206 aa5.71□□□□□ -1.5
CCDC93-208ENST00000474546 FAM19A5Q7Z5A7 132 aaPredicted RBP5.71□□□□□ -1.5
CCDC93-208ENST00000474546 Q8IZM0 81 aa5.71□□□□□ -1.5
CCDC93-208ENST00000474546 SMIM11BQ8TCY0 68 aa5.71□□□□□ -1.5
CCDC93-208ENST00000474546 TRGV1A0A0A0MS02 117 aa5.7□□□□□ -1.5
CCDC93-208ENST00000474546 COX6A2Q02221 97 aa5.7□□□□□ -1.5
CCDC93-208ENST00000474546 RBMY1FQ15415 496 aaKnown RBP5.7□□□□□ -1.5
CCDC93-208ENST00000474546 LYPD5Q6UWN5 251 aa5.7□□□□□ -1.5
CCDC93-208ENST00000474546 Q6YL49 198 aa5.7□□□□□ -1.5
CCDC93-208ENST00000474546 DPH3Q96FX2 82 aa5.7□□□□□ -1.5
CCDC93-208ENST00000474546 A0A1W2PPR1 153 aa5.69□□□□□ -1.5
CCDC93-208ENST00000474546 A8MZ25 164 aa5.69□□□□□ -1.5
CCDC93-208ENST00000474546 LECT2O14960 151 aa5.69□□□□□ -1.5
CCDC93-208ENST00000474546 PAX4O43316 350 aa5.69□□□□□ -1.5
CCDC93-208ENST00000474546 SS18Q15532 418 aa5.69□□□□□ -1.5
CCDC93-208ENST00000474546 DEFB114Q30KQ6 69 aa5.69□□□□□ -1.5
CCDC93-208ENST00000474546 Q6ZSV7 163 aa5.69□□□□□ -1.5
CCDC93-208ENST00000474546 DEFB104AQ8WTQ1 72 aa5.69□□□□□ -1.5
CCDC93-208ENST00000474546 TRAV7A0A075B6U4 112 aa5.68□□□□□ -1.5
CCDC93-208ENST00000474546 LOC110117498A0A087WWA1 95 aa5.68□□□□□ -1.5
CCDC93-208ENST00000474546 IGHV3-38A0A0C4DH36 116 aa5.68□□□□□ -1.5
CCDC93-208ENST00000474546 A0A1B0GUV1 79 aa5.68□□□□□ -1.5
CCDC93-208ENST00000474546 CCL18P55774 89 aa5.68□□□□□ -1.5
CCDC93-208ENST00000474546 PROK1P58294 105 aa5.68□□□□□ -1.5
CCDC93-208ENST00000474546 DEFB112Q30KQ8 113 aa5.68□□□□□ -1.5
CCDC93-208ENST00000474546 Q6ZSN1 163 aa5.68□□□□□ -1.5
CCDC93-208ENST00000474546 LINC00337Q8N6G1 96 aa5.68□□□□□ -1.5
CCDC93-208ENST00000474546 FAM218AQ96MZ4 157 aa5.68□□□□□ -1.5
CCDC93-208ENST00000474546 UPK3BQ9BT76 320 aa5.68□□□□□ -1.5
CCDC93-208ENST00000474546 ZNF702PQ9H963 129 aa5.68□□□□□ -1.5
CCDC93-208ENST00000474546 C14orf132Q9NPU4 83 aa5.68□□□□□ -1.5
CCDC93-208ENST00000474546 LINC00846Q9NV44 126 aa5.68□□□□□ -1.5
CCDC93-208ENST00000474546 C22orf24Q9Y442 160 aa5.68□□□□□ -1.5
CCDC93-208ENST00000474546 SERP1Q9Y6X1 66 aa5.68□□□□□ -1.5
CCDC93-208ENST00000474546 IGKV2-28A0A075B6P5 120 aa5.67□□□□□ -1.5
CCDC93-208ENST00000474546 IGHV3OR16-9A0A0B4J2B5 98 aa5.67□□□□□ -1.5
CCDC93-208ENST00000474546 ZNF561-AS1K7EIQ3 104 aa5.67□□□□□ -1.5
CCDC93-208ENST00000474546 IGKV2D-28P01615 120 aa5.67□□□□□ -1.5
CCDC93-208ENST00000474546 CXCL6P80162 114 aa5.67□□□□□ -1.5
CCDC93-208ENST00000474546 C6orf226Q5I0X4 101 aa5.67□□□□□ -1.5
CCDC93-208ENST00000474546 MAPK1IP1LQ8NDC0 245 aa5.67□□□□□ -1.5
CCDC93-208ENST00000474546 TRGV2A0A075B6R0 118 aa5.66□□□□□ -1.5
CCDC93-208ENST00000474546 A0A087WYN8 130 aa5.66□□□□□ -1.5
CCDC93-208ENST00000474546 TRBV6-8A0A0A6YYG3 113 aa5.66□□□□□ -1.5
CCDC93-208ENST00000474546 FSHBP01225 129 aa5.66□□□□□ -1.5
CCDC93-208ENST00000474546 Q8N814 137 aa5.66□□□□□ -1.5
CCDC93-208ENST00000474546 WWC2-AS2Q96NR7 200 aa5.66□□□□□ -1.5
CCDC93-208ENST00000474546 Q9HAA7 133 aa5.66□□□□□ -1.5
CCDC93-208ENST00000474546 IGHV4-30-2A0A087WSY4 118 aa5.65□□□□□ -1.5
CCDC93-208ENST00000474546 TRGV4A0A0C4DH28 118 aa5.65□□□□□ -1.5
CCDC93-208ENST00000474546 A0A0U1RRA0 63 aa5.65□□□□□ -1.5
CCDC93-208ENST00000474546 FAM236DA0A1B0GTK5 79 aa5.65□□□□□ -1.5
CCDC93-208ENST00000474546 ERC2-IT1O76042 136 aa5.65□□□□□ -1.5
CCDC93-208ENST00000474546 FAM236CP0DP71 79 aa5.65□□□□□ -1.5
CCDC93-208ENST00000474546 NTM-AS1Q6ZSK4 140 aa5.65□□□□□ -1.5
CCDC93-208ENST00000474546 TOMM7Q9P0U1 55 aa5.65□□□□□ -1.5
CCDC93-208ENST00000474546 NACAE9PAV3 2078 aa5.64□□□□□ -1.51
CCDC93-208ENST00000474546 IGHV4-28A0A0C4DH34 117 aa5.64□□□□□ -1.51
CCDC93-208ENST00000474546 EDN2P20800 178 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms