RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 RPL39P62891 51 aaKnown RBP2.98□□□□□ -1.93
SNRNP40-204ENST00000474025 KRTAP15-1Q3LI76 137 aa2.98□□□□□ -1.93
SNRNP40-204ENST00000474025 GAGE2AQ6NT46 116 aa2.98□□□□□ -1.93
SNRNP40-204ENST00000474025 FAM231DQ6ZW35 169 aa2.98□□□□□ -1.93
SNRNP40-204ENST00000474025 BORCS7Q96B45 105 aa2.98□□□□□ -1.93
SNRNP40-204ENST00000474025 IFITM10A6NMD0 228 aa2.97□□□□□ -1.93
SNRNP40-204ENST00000474025 PPP1R2P9O14990 202 aa2.97□□□□□ -1.93
SNRNP40-204ENST00000474025 PPP1R17O96001 155 aa2.97□□□□□ -1.93
SNRNP40-204ENST00000474025 MRPS36P82909 103 aaKnown RBP2.97□□□□□ -1.93
SNRNP40-204ENST00000474025 VAMP3Q15836 100 aa2.97□□□□□ -1.93
SNRNP40-204ENST00000474025 KRTAP13-2Q52LG2 175 aa2.97□□□□□ -1.93
SNRNP40-204ENST00000474025 C6orf226Q5I0X4 101 aa2.97□□□□□ -1.93
SNRNP40-204ENST00000474025 C2orf82Q6UX34 121 aa2.97□□□□□ -1.93
SNRNP40-204ENST00000474025 TMEM18Q96B42 140 aa2.97□□□□□ -1.93
SNRNP40-204ENST00000474025 SPANXA1Q9NS26 97 aa2.97□□□□□ -1.93
SNRNP40-204ENST00000474025 ANAPC11Q9NYG5 84 aa2.97□□□□□ -1.93
SNRNP40-204ENST00000474025 C22orf24Q9Y442 160 aa2.97□□□□□ -1.93
SNRNP40-204ENST00000474025 IGLV7-46A0A075B6I9 117 aa2.96□□□□□ -1.94
SNRNP40-204ENST00000474025 TGIF2-C20orf24A0A0A6YYL0 155 aa2.96□□□□□ -1.94
SNRNP40-204ENST00000474025 TMEM250H0YL14 139 aa2.96□□□□□ -1.94
SNRNP40-204ENST00000474025 BCE1O60756 84 aa2.96□□□□□ -1.94
SNRNP40-204ENST00000474025 RPL28P46779 137 aaKnown RBP2.96□□□□□ -1.94
SNRNP40-204ENST00000474025 RPL32P62910 135 aaKnown RBP2.96□□□□□ -1.94
SNRNP40-204ENST00000474025 HBBP68871 147 aa2.96□□□□□ -1.94
SNRNP40-204ENST00000474025 MRPL51Q4U2R6 128 aaKnown RBP2.96□□□□□ -1.94
SNRNP40-204ENST00000474025 LINC00242Q5T6M2 205 aa2.96□□□□□ -1.94
SNRNP40-204ENST00000474025 LINC00173Q6ZV60 143 aa2.96□□□□□ -1.94
SNRNP40-204ENST00000474025 LINC00304Q8N9R0 145 aa2.96□□□□□ -1.94
SNRNP40-204ENST00000474025 PACRGQ96M98 296 aaPredicted RBP2.96□□□□□ -1.94
SNRNP40-204ENST00000474025 TRBV24-1A0A075B6N3 115 aa2.95□□□□□ -1.94
SNRNP40-204ENST00000474025 ZNF727A8MUV8 499 aa2.95□□□□□ -1.94
SNRNP40-204ENST00000474025 TCAPO15273 167 aa2.95□□□□□ -1.94
SNRNP40-204ENST00000474025 HERV-K104P63124 156 aa2.95□□□□□ -1.94
SNRNP40-204ENST00000474025 RIGQ13278 110 aa2.95□□□□□ -1.94
SNRNP40-204ENST00000474025 FAM104BQ5XKR9 115 aa2.95□□□□□ -1.94
SNRNP40-204ENST00000474025 MRPL55Q7Z7F7 128 aaKnown RBP2.95□□□□□ -1.94
SNRNP40-204ENST00000474025 LINC01551Q86U37 167 aa2.95□□□□□ -1.94
SNRNP40-204ENST00000474025 KRTAP13-1Q8IUC0 172 aa2.95□□□□□ -1.94
SNRNP40-204ENST00000474025 C20orf78Q9BR46 151 aa2.95□□□□□ -1.94
SNRNP40-204ENST00000474025 XAGE1AQ9HD64 81 aa2.95□□□□□ -1.94
SNRNP40-204ENST00000474025 TP73-AS1Q9UF72 201 aa2.95□□□□□ -1.94
SNRNP40-204ENST00000474025 IGLV4-3A0A075B6K6 122 aa2.94□□□□□ -1.94
SNRNP40-204ENST00000474025 LINC00862A6NCI5 91 aa2.94□□□□□ -1.94
SNRNP40-204ENST00000474025 CFC1BP0CG36 223 aa2.94□□□□□ -1.94
SNRNP40-204ENST00000474025 CEBPGP53567 150 aa2.94□□□□□ -1.94
SNRNP40-204ENST00000474025 UBE2V1Q13404 147 aa2.94□□□□□ -1.94
SNRNP40-204ENST00000474025 FAM229BQ4G0N7 80 aa2.94□□□□□ -1.94
SNRNP40-204ENST00000474025 LINC01561Q8N1V8 128 aa2.94□□□□□ -1.94
SNRNP40-204ENST00000474025 SMIM2Q9BVW6 85 aa2.94□□□□□ -1.94
SNRNP40-204ENST00000474025 PPDPFQ9H3Y8 114 aa2.94□□□□□ -1.94
SNRNP40-204ENST00000474025 OSTCQ9NRP0 149 aa2.94□□□□□ -1.94
SNRNP40-204ENST00000474025 V9GYV3 84 aa2.94□□□□□ -1.94
SNRNP40-204ENST00000474025 RPL37AP8A6NKH3 93 aa2.93□□□□□ -1.94
SNRNP40-204ENST00000474025 NPYP01303 97 aa2.93□□□□□ -1.94
SNRNP40-204ENST00000474025 CKS2P33552 79 aa2.93□□□□□ -1.94
SNRNP40-204ENST00000474025 IFI27P40305 119 aaPredicted RBP2.93□□□□□ -1.94
SNRNP40-204ENST00000474025 ASB16-AS1Q495Z4 193 aa2.93□□□□□ -1.94
SNRNP40-204ENST00000474025 SLC51BQ86UW2 128 aa2.93□□□□□ -1.94
SNRNP40-204ENST00000474025 TMEM141Q96I45 108 aa2.93□□□□□ -1.94
SNRNP40-204ENST00000474025 LINC00167Q96N53 147 aa2.93□□□□□ -1.94
SNRNP40-204ENST00000474025 SMIM7Q9BQ49 75 aa2.93□□□□□ -1.94
SNRNP40-204ENST00000474025 KRTAP4-1Q9BYQ7 146 aa2.93□□□□□ -1.94
SNRNP40-204ENST00000474025 PYGO1Q9Y3Y4 419 aa2.93□□□□□ -1.94
SNRNP40-204ENST00000474025 FLGP20930 4061 aaPredicted RBP2.93□□□□□ -1.94
SNRNP40-204ENST00000474025 IGKV2D-26A0A0A0MRZ7 120 aa2.92□□□□□ -1.94
SNRNP40-204ENST00000474025 D6R8Y8 96 aa2.92□□□□□ -1.94
SNRNP40-204ENST00000474025 PRSS2P07478 247 aa2.92□□□□□ -1.94
SNRNP40-204ENST00000474025 CKS1BP61024 79 aa2.92□□□□□ -1.94
SNRNP40-204ENST00000474025 ZC2HC1BQ5TFG8 222 aa2.92□□□□□ -1.94
SNRNP40-204ENST00000474025 Q6ZN92 141 aa2.92□□□□□ -1.94
SNRNP40-204ENST00000474025 Q8IZM0 81 aa2.92□□□□□ -1.94
SNRNP40-204ENST00000474025 EIF5A2Q9GZV4 153 aaKnown RBP2.92□□□□□ -1.94
SNRNP40-204ENST00000474025 TOMM7Q9P0U1 55 aa2.92□□□□□ -1.94
SNRNP40-204ENST00000474025 NAT8BQ9UHF3 227 aa2.92□□□□□ -1.94
SNRNP40-204ENST00000474025 SMIM27A0A1W2PRY6 76 aa2.91□□□□□ -1.94
SNRNP40-204ENST00000474025 F8VRH5 84 aa2.91□□□□□ -1.94
SNRNP40-204ENST00000474025 UBE2AP49459 152 aa2.91□□□□□ -1.94
SNRNP40-204ENST00000474025 RAB14P61106 215 aa2.91□□□□□ -1.94
SNRNP40-204ENST00000474025 KRTAP13-3Q3SY46 172 aa2.91□□□□□ -1.94
SNRNP40-204ENST00000474025 FAM74A3Q4VXF1 159 aa2.91□□□□□ -1.94
SNRNP40-204ENST00000474025 TEX43Q6ZNM6 134 aa2.91□□□□□ -1.94
SNRNP40-204ENST00000474025 FP248Q71RG6 208 aaPredicted RBP2.91□□□□□ -1.94
SNRNP40-204ENST00000474025 C2orf88Q9BSF0 95 aa2.91□□□□□ -1.94
SNRNP40-204ENST00000474025 BATF3Q9NR55 127 aa2.91□□□□□ -1.94
SNRNP40-204ENST00000474025 IGLV5-37A0A075B6J1 123 aa2.9□□□□□ -1.95
SNRNP40-204ENST00000474025 A0A1B0GW15 77 aa2.9□□□□□ -1.95
SNRNP40-204ENST00000474025 PPBPP02775 128 aa2.9□□□□□ -1.95
SNRNP40-204ENST00000474025 RAB5AP20339 215 aa2.9□□□□□ -1.95
SNRNP40-204ENST00000474025 SEC61BP60468 96 aaKnown RBP2.9□□□□□ -1.95
SNRNP40-204ENST00000474025 PNRC1Q12796 327 aaPredicted RBP2.9□□□□□ -1.95
SNRNP40-204ENST00000474025 FAM19A3Q7Z5A8 133 aa2.9□□□□□ -1.95
SNRNP40-204ENST00000474025 AKAP14Q86UN6 197 aa2.9□□□□□ -1.95
SNRNP40-204ENST00000474025 C3orf22Q8N5N4 141 aa2.9□□□□□ -1.95
SNRNP40-204ENST00000474025 LINC00337Q8N6G1 96 aa2.9□□□□□ -1.95
SNRNP40-204ENST00000474025 AMELXQ99217 191 aa2.9□□□□□ -1.95
SNRNP40-204ENST00000474025 PAM16Q9Y3D7 125 aa2.9□□□□□ -1.95
SNRNP40-204ENST00000474025 IGKV2-28A0A075B6P5 120 aa2.89□□□□□ -1.95
SNRNP40-204ENST00000474025 A0A1B0GVG6 124 aa2.89□□□□□ -1.95
SNRNP40-204ENST00000474025 A0A1B0GXF2 115 aa2.89□□□□□ -1.95
SNRNP40-204ENST00000474025 F8W036 122 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms