RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 HIST1H2BCP62807 126 aa7.33□□□□□ -1.24
TRAF4-209ENST00000473421 MRPS36P82909 103 aaKnown RBP7.33□□□□□ -1.24
TRAF4-209ENST00000473421 HIST2H2BEQ16778 126 aa7.33□□□□□ -1.24
TRAF4-209ENST00000473421 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.33□□□□□ -1.24
TRAF4-209ENST00000473421 HIST3H2BBQ8N257 126 aa7.33□□□□□ -1.24
TRAF4-209ENST00000473421 TYMSOSQ8TAI1 123 aa7.33□□□□□ -1.24
TRAF4-209ENST00000473421 HIST1H2BHQ93079 126 aa7.33□□□□□ -1.24
TRAF4-209ENST00000473421 HIST1H2BNQ99877 126 aa7.33□□□□□ -1.24
TRAF4-209ENST00000473421 HIST1H2BMQ99879 126 aa7.33□□□□□ -1.24
TRAF4-209ENST00000473421 SMIM7Q9BQ49 75 aa7.33□□□□□ -1.24
TRAF4-209ENST00000473421 XAGE1AQ9HD64 81 aa7.33□□□□□ -1.24
TRAF4-209ENST00000473421 OSTCQ9NRP0 149 aa7.33□□□□□ -1.24
TRAF4-209ENST00000473421 ZNF727A8MUV8 499 aa7.32□□□□□ -1.24
TRAF4-209ENST00000473421 TNFRSF6BO95407 300 aa7.32□□□□□ -1.24
TRAF4-209ENST00000473421 NDUFA6P56556 154 aa7.32□□□□□ -1.24
TRAF4-209ENST00000473421 HBBP68871 147 aa7.32□□□□□ -1.24
TRAF4-209ENST00000473421 SMAGPQ0VAQ4 97 aa7.32□□□□□ -1.24
TRAF4-209ENST00000473421 RIGQ13278 110 aa7.32□□□□□ -1.24
TRAF4-209ENST00000473421 SPANXA1Q9NS26 97 aa7.32□□□□□ -1.24
TRAF4-209ENST00000473421 TRBV30A0A0K0K1B3 111 aa7.31□□□□□ -1.24
TRAF4-209ENST00000473421 NPYP01303 97 aa7.31□□□□□ -1.24
TRAF4-209ENST00000473421 TMEM18Q96B42 140 aa7.31□□□□□ -1.24
TRAF4-209ENST00000473421 C20orf78Q9BR46 151 aa7.31□□□□□ -1.24
TRAF4-209ENST00000473421 SMIM2Q9BVW6 85 aa7.31□□□□□ -1.24
TRAF4-209ENST00000473421 IGLV4-3A0A075B6K6 122 aa7.3□□□□□ -1.24
TRAF4-209ENST00000473421 TGIF2-C20orf24A0A0A6YYL0 155 aa7.3□□□□□ -1.24
TRAF4-209ENST00000473421 PPP1R17O96001 155 aa7.3□□□□□ -1.24
TRAF4-209ENST00000473421 CRYGAP11844 174 aa7.3□□□□□ -1.24
TRAF4-209ENST00000473421 RPL32P62910 135 aaKnown RBP7.3□□□□□ -1.24
TRAF4-209ENST00000473421 PYY3Q5JQD4 70 aa7.3□□□□□ -1.24
TRAF4-209ENST00000473421 TRAV9-1A0A075B6T8 112 aa7.29□□□□□ -1.24
TRAF4-209ENST00000473421 D6R8Y8 96 aa7.29□□□□□ -1.24
TRAF4-209ENST00000473421 TRGC2P03986 189 aa7.29□□□□□ -1.24
TRAF4-209ENST00000473421 CKS2P33552 79 aa7.29□□□□□ -1.24
TRAF4-209ENST00000473421 PACRGQ96M98 296 aaPredicted RBP7.29□□□□□ -1.24
TRAF4-209ENST00000473421 RPL37AP8A6NKH3 93 aa7.28□□□□□ -1.24
TRAF4-209ENST00000473421 NUPR1O60356 82 aa7.28□□□□□ -1.24
TRAF4-209ENST00000473421 JOSD1Q15040 202 aaPredicted RBP7.28□□□□□ -1.24
TRAF4-209ENST00000473421 LINC00173Q6ZV60 143 aa7.28□□□□□ -1.24
TRAF4-209ENST00000473421 KRTAP4-1Q9BYQ7 146 aa7.28□□□□□ -1.24
TRAF4-209ENST00000473421 CDIP1Q9H305 208 aa7.28□□□□□ -1.24
TRAF4-209ENST00000473421 BCE1O60756 84 aa7.27□□□□□ -1.25
TRAF4-209ENST00000473421 DDTP30046 118 aa7.27□□□□□ -1.25
TRAF4-209ENST00000473421 HIST1H2BLQ99880 126 aa7.27□□□□□ -1.25
TRAF4-209ENST00000473421 IGLV7-46A0A075B6I9 117 aa7.26□□□□□ -1.25
TRAF4-209ENST00000473421 SMIM27A0A1W2PRY6 76 aa7.26□□□□□ -1.25
TRAF4-209ENST00000473421 RPL23P62829 140 aaKnown RBP7.26□□□□□ -1.25
TRAF4-209ENST00000473421 ADIRFQ15847 76 aa7.26□□□□□ -1.25
TRAF4-209ENST00000473421 TPRXLQ17RH7 258 aa7.26□□□□□ -1.25
TRAF4-209ENST00000473421 LCE2DQ5TA82 110 aaPredicted RBP7.26□□□□□ -1.25
TRAF4-209ENST00000473421 KRTAP13-1Q8IUC0 172 aa7.26□□□□□ -1.25
TRAF4-209ENST00000473421 LINC00167Q96N53 147 aa7.26□□□□□ -1.25
TRAF4-209ENST00000473421 TOMM7Q9P0U1 55 aa7.26□□□□□ -1.25
TRAF4-209ENST00000473421 NAT8BQ9UHF3 227 aa7.26□□□□□ -1.25
TRAF4-209ENST00000473421 GAGE10A6NGK3 116 aa7.25□□□□□ -1.25
TRAF4-209ENST00000473421 FABP4P15090 132 aa7.25□□□□□ -1.25
TRAF4-209ENST00000473421 RPL28P46779 137 aaKnown RBP7.25□□□□□ -1.25
TRAF4-209ENST00000473421 MRPL55Q7Z7F7 128 aaKnown RBP7.25□□□□□ -1.25
TRAF4-209ENST00000473421 CRCT1Q9UGL9 99 aa7.25□□□□□ -1.25
TRAF4-209ENST00000473421 COX19Q49B96 90 aa7.24□□□□□ -1.25
TRAF4-209ENST00000473421 MRPL54Q6P161 138 aaKnown RBP7.24□□□□□ -1.25
TRAF4-209ENST00000473421 LINC00304Q8N9R0 145 aa7.24□□□□□ -1.25
TRAF4-209ENST00000473421 C2orf88Q9BSF0 95 aa7.24□□□□□ -1.25
TRAF4-209ENST00000473421 PYGO1Q9Y3Y4 419 aa7.24□□□□□ -1.25
TRAF4-209ENST00000473421 IFI27P40305 119 aaPredicted RBP7.23□□□□□ -1.25
TRAF4-209ENST00000473421 TMEM141Q96I45 108 aa7.23□□□□□ -1.25
TRAF4-209ENST00000473421 A0A1B0GXF2 115 aa7.22□□□□□ -1.25
TRAF4-209ENST00000473421 CKS1BP61024 79 aa7.22□□□□□ -1.25
TRAF4-209ENST00000473421 C6orf226Q5I0X4 101 aa7.22□□□□□ -1.25
TRAF4-209ENST00000473421 LINC01561Q8N1V8 128 aa7.22□□□□□ -1.25
TRAF4-209ENST00000473421 C14orf144Q96I85 54 aa7.22□□□□□ -1.25
TRAF4-209ENST00000473421 TP73-AS1Q9UF72 201 aa7.22□□□□□ -1.25
TRAF4-209ENST00000473421 TEX43Q6ZNM6 134 aa7.21□□□□□ -1.26
TRAF4-209ENST00000473421 AMELXQ99217 191 aa7.21□□□□□ -1.26
TRAF4-209ENST00000473421 ALKBH7Q9BT30 221 aaPredicted RBP7.21□□□□□ -1.26
TRAF4-209ENST00000473421 LOC389332A0A1B0GUA5 103 aa7.2□□□□□ -1.26
TRAF4-209ENST00000473421 A0A1B0GW15 77 aa7.2□□□□□ -1.26
TRAF4-209ENST00000473421 PRSS2P07478 247 aa7.2□□□□□ -1.26
TRAF4-209ENST00000473421 Q6ZN92 141 aa7.2□□□□□ -1.26
TRAF4-209ENST00000473421 Q8IZM0 81 aa7.2□□□□□ -1.26
TRAF4-209ENST00000473421 PPDPFQ9H3Y8 114 aa7.2□□□□□ -1.26
TRAF4-209ENST00000473421 CDKN2A-AS1Q9UH64 79 aa7.2□□□□□ -1.26
TRAF4-209ENST00000473421 C2orf66Q6UXQ4 117 aa7.19□□□□□ -1.26
TRAF4-209ENST00000473421 C3orf22Q8N5N4 141 aa7.19□□□□□ -1.26
TRAF4-209ENST00000473421 PRELID3AQ96N28 172 aa7.19□□□□□ -1.26
TRAF4-209ENST00000473421 IGIPA6NJ69 53 aa7.18□□□□□ -1.26
TRAF4-209ENST00000473421 PRLHP81277 87 aa7.18□□□□□ -1.26
TRAF4-209ENST00000473421 FAM229BQ4G0N7 80 aa7.18□□□□□ -1.26
TRAF4-209ENST00000473421 PDZD11Q5EBL8 140 aa7.18□□□□□ -1.26
TRAF4-209ENST00000473421 TMEM136Q6ZRR5 245 aa7.18□□□□□ -1.26
TRAF4-209ENST00000473421 TRAPPC1Q9Y5R8 145 aa7.18□□□□□ -1.26
TRAF4-209ENST00000473421 F8VRH5 84 aa7.17□□□□□ -1.26
TRAF4-209ENST00000473421 UBE2AP49459 152 aa7.17□□□□□ -1.26
TRAF4-209ENST00000473421 ORMDL3Q8N138 153 aa7.17□□□□□ -1.26
TRAF4-209ENST00000473421 VCX2Q9H322 139 aa7.17□□□□□ -1.26
TRAF4-209ENST00000473421 IGKV2-28A0A075B6P5 120 aa7.16□□□□□ -1.26
TRAF4-209ENST00000473421 PRSS47A8MTI9 375 aa7.16□□□□□ -1.26
TRAF4-209ENST00000473421 IGKV2D-28P01615 120 aa7.16□□□□□ -1.26
TRAF4-209ENST00000473421 PPBPP02775 128 aa7.16□□□□□ -1.26
TRAF4-209ENST00000473421 FAM19A3Q7Z5A8 133 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms