RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 MYO15AQ9UKN7 3530 aa1.74□□□□□ -2.13
CD46-213ENST00000471987 FRYQ5TBA9 3013 aa1.74□□□□□ -2.13
CD46-213ENST00000471987 RP1L1Q8IWN7 2480 aaPredicted RBP1.74□□□□□ -2.13
CD46-213ENST00000471987 ZZEF1O43149 2961 aa1.74□□□□□ -2.13
CD46-213ENST00000471987 COL4A1P02462 1669 aa1.74□□□□□ -2.13
CD46-213ENST00000471987 LRRC37A3O60309 1634 aa1.73□□□□□ -2.13
CD46-213ENST00000471987 ABCA12Q86UK0 2595 aa1.73□□□□□ -2.13
CD46-213ENST00000471987 UBR4Q5T4S7 5183 aa1.73□□□□□ -2.13
CD46-213ENST00000471987 DLEC1Q9Y238 1755 aa1.73□□□□□ -2.13
CD46-213ENST00000471987 CEP290O15078 2479 aa1.73□□□□□ -2.13
CD46-213ENST00000471987 FBN2P35556 2912 aa1.73□□□□□ -2.13
CD46-213ENST00000471987 IGHV3-64A0A075B6Q5 118 aa1.73□□□□□ -2.13
CD46-213ENST00000471987 TRBV6-8A0A0A6YYG3 113 aa1.73□□□□□ -2.13
CD46-213ENST00000471987 TRBV10-1A0A0K0K1A3 114 aa1.73□□□□□ -2.13
CD46-213ENST00000471987 ODF3BA8MYP8 253 aa1.73□□□□□ -2.13
CD46-213ENST00000471987 IGLV7-43P04211 117 aa1.73□□□□□ -2.13
CD46-213ENST00000471987 ELOF1P60002 83 aaKnown RBP1.73□□□□□ -2.13
CD46-213ENST00000471987 SFTA2Q6UW10 78 aa1.73□□□□□ -2.13
CD46-213ENST00000471987 HEATR1Q9H583 2144 aaKnown RBP1.73□□□□□ -2.13
CD46-213ENST00000471987 E9PCH4 1651 aa1.73□□□□□ -2.13
CD46-213ENST00000471987 MYO7AQ13402 2215 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 BAZ2BQ9UIF8 2168 aaKnown RBP1.72□□□□□ -2.13
CD46-213ENST00000471987 DDX60Q8IY21 1712 aaKnown RBP1.72□□□□□ -2.13
CD46-213ENST00000471987 DOT1LQ8TEK3 1739 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 NRXN2Q9P2S2 1712 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 TOGARAM1Q9Y4F4 1720 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 ZFYVE26Q68DK2 2539 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 RYR1P21817 5038 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 IGHV3OR16-8A0A075B7F1 116 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 A0A1W2PNM2 257 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 HIGD1CA8MV81 97 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 HMGN4O00479 90 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 PSCAO43653 123 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 PPYP01298 95 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 ARMS2P0C7Q2 107 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 KRTAP26-1Q6PEX3 210 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 ZNF833PQ6ZTB9 187 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 Q8TAT8 98 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 NDUFA4L2Q9NRX3 87 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 LENEPQ9Y5L5 61 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 LOC400499M0QZD8 3231 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 HELZ2Q9BYK8 2649 aaKnown RBP1.72□□□□□ -2.13
CD46-213ENST00000471987 TPRP12270 2363 aaKnown RBP1.72□□□□□ -2.13
CD46-213ENST00000471987 PCDH15Q96QU1 1955 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 CFAP46Q8IYW2 2715 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 DMXL1Q9Y485 3027 aa1.72□□□□□ -2.13
CD46-213ENST00000471987 NRAPQ86VF7 1730 aa1.71□□□□□ -2.13
CD46-213ENST00000471987 SLIT1O75093 1534 aa1.71□□□□□ -2.14
CD46-213ENST00000471987 RYR3Q15413 4870 aa1.71□□□□□ -2.14
CD46-213ENST00000471987 TNRC6BQ9UPQ9 1833 aaKnown RBP1.71□□□□□ -2.14
CD46-213ENST00000471987 MAP1BP46821 2468 aaKnown RBP1.71□□□□□ -2.14
CD46-213ENST00000471987 TRBV7-4A0A0J9YYF1 115 aa1.71□□□□□ -2.14
CD46-213ENST00000471987 A0A1B0GU33 70 aa1.71□□□□□ -2.14
CD46-213ENST00000471987 LINC01549A6NIU2 74 aa1.71□□□□□ -2.14
CD46-213ENST00000471987 IGHV3-33P01772 117 aa1.71□□□□□ -2.14
CD46-213ENST00000471987 SPINT3P49223 89 aa1.71□□□□□ -2.14
CD46-213ENST00000471987 DEFB113Q30KQ7 82 aa1.71□□□□□ -2.14
CD46-213ENST00000471987 Q86TA4 180 aa1.71□□□□□ -2.14
CD46-213ENST00000471987 Q8NAQ8 132 aa1.71□□□□□ -2.14
CD46-213ENST00000471987 AMELXQ99217 191 aa1.71□□□□□ -2.14
CD46-213ENST00000471987 TXNDC17Q9BRA2 123 aa1.71□□□□□ -2.14
CD46-213ENST00000471987 TEX15Q9BXT5 2789 aa1.71□□□□□ -2.14
CD46-213ENST00000471987 DUOX1Q9NRD9 1551 aa1.71□□□□□ -2.14
CD46-213ENST00000471987 MYO9AB2RTY4 2548 aa1.71□□□□□ -2.14
CD46-213ENST00000471987 ZGRF1Q86YA3 2104 aa1.7□□□□□ -2.14
CD46-213ENST00000471987 TRAV12-1A0A0B4J245 112 aa1.7□□□□□ -2.14
CD46-213ENST00000471987 TRBV30A0A0K0K1B3 111 aa1.7□□□□□ -2.14
CD46-213ENST00000471987 C10orf142B7Z368 130 aa1.7□□□□□ -2.14
CD46-213ENST00000471987 D6R8Y8 96 aa1.7□□□□□ -2.14
CD46-213ENST00000471987 TFF1P04155 84 aa1.7□□□□□ -2.14
CD46-213ENST00000471987 C1orf137Q5JT78 98 aa1.7□□□□□ -2.14
CD46-213ENST00000471987 MUSTN1Q8IVN3 82 aa1.7□□□□□ -2.14
CD46-213ENST00000471987 DMAC1Q96GE9 116 aa1.7□□□□□ -2.14
CD46-213ENST00000471987 MINOS1-NBL1R4GNA1 71 aa1.7□□□□□ -2.14
CD46-213ENST00000471987 FAM208BQ5VWN6 2430 aa1.7□□□□□ -2.14
CD46-213ENST00000471987 NBPF19A0A087WUL8 3843 aa1.7□□□□□ -2.14
CD46-213ENST00000471987 NCOA6Q14686 2063 aaPredicted RBP1.7□□□□□ -2.14
CD46-213ENST00000471987 BOD1L1Q8NFC6 3051 aa1.7□□□□□ -2.14
CD46-213ENST00000471987 UBR5O95071 2799 aaPredicted RBP1.7□□□□□ -2.14
CD46-213ENST00000471987 DEPDC5O75140 1603 aa1.69□□□□□ -2.14
CD46-213ENST00000471987 NCOR2Q9Y618 2525 aa1.69□□□□□ -2.14
CD46-213ENST00000471987 TENM4Q6N022 2769 aa1.69□□□□□ -2.14
CD46-213ENST00000471987 CLPSL1A2RUU4 121 aa1.69□□□□□ -2.14
CD46-213ENST00000471987 IGHV3-30P01768 117 aa1.69□□□□□ -2.14
CD46-213ENST00000471987 IFI6P09912 130 aa1.69□□□□□ -2.14
CD46-213ENST00000471987 IGHV3-30-5P0DP03 117 aa1.69□□□□□ -2.14
CD46-213ENST00000471987 HMGA1P17096 107 aaKnown RBP1.69□□□□□ -2.14
CD46-213ENST00000471987 SNRPGP62308 76 aaKnown RBP1.69□□□□□ -2.14
CD46-213ENST00000471987 ERHP84090 104 aaKnown RBP1.69□□□□□ -2.14
CD46-213ENST00000471987 FAM74A4Q5TZK3 123 aa1.69□□□□□ -2.14
CD46-213ENST00000471987 GDF5OSQ5U4N7 250 aa1.69□□□□□ -2.14
CD46-213ENST00000471987 CSAG1Q6PB30 78 aa1.69□□□□□ -2.14
CD46-213ENST00000471987 Q9BRP9 147 aa1.69□□□□□ -2.14
CD46-213ENST00000471987 ORMDL1Q9P0S3 153 aa1.69□□□□□ -2.14
CD46-213ENST00000471987 LHFPL6Q9Y693 200 aa1.69□□□□□ -2.14
CD46-213ENST00000471987 ZNF831Q5JPB2 1677 aa1.69□□□□□ -2.14
CD46-213ENST00000471987 LMO7Q8WWI1 1683 aa1.69□□□□□ -2.14
CD46-213ENST00000471987 ACACBO00763 2458 aa1.69□□□□□ -2.14
CD46-213ENST00000471987 BIRC6Q9NR09 4857 aa1.68□□□□□ -2.14
CD46-213ENST00000471987 NBEAQ8NFP9 2946 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms