RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 MED28Q9H204 178 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 EPDR1Q9UM22 224 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 URGCP-MRPS24S4R325 110 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 ARL2-SNX15V9GYD0 113 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 TRBV7-3A0A075B6L6 115 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 A0A087WX48 190 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 FABP5P3A8MUU1 101 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 INMT-MINDY4F8WBC2 141 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 H3BVH4 76 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 SH2D1AO60880 128 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 LTAP01374 205 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 CRPP02741 224 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 ARMS2P0C7Q2 107 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 S100A4P26447 101 aaKnown RBP1.67□□□□□ -2.14
HDAC9-221ENST00000471887 ATP6V0CP27449 155 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 CRIP1P50238 77 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 IQCJQ1A5X6 159 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 TMEM97Q5BJF2 176 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 FAM162BQ5T6X4 162 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 OR2T35Q8NGX2 323 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 SPACA4Q8TDM5 124 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 ZC2HC1AQ96GY0 325 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 AQP10Q96PS8 301 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 SMIM3Q9BZL3 60 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 NKX6-2Q9C056 277 aaPredicted RBP1.67□□□□□ -2.14
HDAC9-221ENST00000471887 PLAC8Q9NZF1 115 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 TNFSF18Q9UNG2 199 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 ZFP30Q9Y2G7 519 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 V9GYY9 64 aa1.67□□□□□ -2.14
HDAC9-221ENST00000471887 A0A0D9SG52 128 aa1.66□□□□□ -2.14
HDAC9-221ENST00000471887 CTXND1A0A1B0GTU2 59 aa1.66□□□□□ -2.14
HDAC9-221ENST00000471887 B4DEV8 164 aa1.66□□□□□ -2.14
HDAC9-221ENST00000471887 ANGP03950 147 aaKnown RBP1.66□□□□□ -2.14
HDAC9-221ENST00000471887 GZMBP10144 247 aa1.66□□□□□ -2.14
HDAC9-221ENST00000471887 TPT1P13693 172 aaKnown RBP1.66□□□□□ -2.14
HDAC9-221ENST00000471887 S100A2P29034 98 aa1.66□□□□□ -2.14
HDAC9-221ENST00000471887 RAB4BP61018 213 aa1.66□□□□□ -2.14
HDAC9-221ENST00000471887 FAM74A4Q5TZK3 123 aa1.66□□□□□ -2.14
HDAC9-221ENST00000471887 LINC01600Q96MT4 127 aa1.66□□□□□ -2.14
HDAC9-221ENST00000471887 PHLDA3Q9Y5J5 127 aa1.66□□□□□ -2.14
HDAC9-221ENST00000471887 FAT4Q6V0I7 4981 aa1.66□□□□□ -2.14
HDAC9-221ENST00000471887 TRBV25-1A0A075B6N4 114 aa1.65□□□□□ -2.15
HDAC9-221ENST00000471887 IGHV3-64A0A075B6Q5 118 aa1.65□□□□□ -2.15
HDAC9-221ENST00000471887 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.65□□□□□ -2.15
HDAC9-221ENST00000471887 TMEM262E9PQX1 116 aa1.65□□□□□ -2.15
HDAC9-221ENST00000471887 M0R036 132 aa1.65□□□□□ -2.15
HDAC9-221ENST00000471887 M0R381 172 aa1.65□□□□□ -2.15
HDAC9-221ENST00000471887 HMGB3O15347 200 aaKnown RBP1.65□□□□□ -2.15
HDAC9-221ENST00000471887 SSNA1O43805 119 aa1.65□□□□□ -2.15
HDAC9-221ENST00000471887 UBE2G1P62253 170 aa1.65□□□□□ -2.15
HDAC9-221ENST00000471887 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.65□□□□□ -2.15
HDAC9-221ENST00000471887 FER1L6-AS1Q8NA97 138 aa1.65□□□□□ -2.15
HDAC9-221ENST00000471887 OR10AG1Q8NH19 301 aa1.65□□□□□ -2.15
HDAC9-221ENST00000471887 AP1S3Q96PC3 154 aa1.65□□□□□ -2.15
HDAC9-221ENST00000471887 GVQW2A0A096LPI5 108 aaPredicted RBP1.64□□□□□ -2.15
HDAC9-221ENST00000471887 BORCS7-ASMTA0A0B4J1R7 106 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 IGHV1-24A0A0C4DH33 117 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 A0A1B0GXF2 115 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 GRIFINA4D1Z8 144 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 MAP1LC3B2A6NCE7 125 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 M0QY20 66 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 NDUFS6O75380 124 aaKnown RBP1.64□□□□□ -2.15
HDAC9-221ENST00000471887 IFNA7P01567 189 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 S100A9P06702 114 aaKnown RBP1.64□□□□□ -2.15
HDAC9-221ENST00000471887 IGLC6P0CF74 106 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 AKR1C3P42330 323 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 DEFA1P59665 94 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 DEFA3P59666 94 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 ZNF56Q15929 161 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 C10orf91Q5T1B1 145 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 AKR1C8PQ5T2L2 129 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 RPL7L1Q6DKI1 246 aaKnown RBP1.64□□□□□ -2.15
HDAC9-221ENST00000471887 SPINK6Q6UWN8 80 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 LINC00269Q8N2A0 174 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 MBD3L1Q8WWY6 194 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 SMIM12Q96EX1 92 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 DERL1Q9BUN8 251 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 ZNF471Q9BX82 626 aaPredicted RBP1.64□□□□□ -2.15
HDAC9-221ENST00000471887 MAP1LC3BQ9GZQ8 125 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 PKIGQ9Y2B9 76 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 ALG5Q9Y673 324 aa1.64□□□□□ -2.15
HDAC9-221ENST00000471887 LPAP08519 4548 aa1.63□□□□□ -2.15
HDAC9-221ENST00000471887 TMSB15BA0A087X1C1 80 aa1.63□□□□□ -2.15
HDAC9-221ENST00000471887 C19orf71A6NCJ1 209 aa1.63□□□□□ -2.15
HDAC9-221ENST00000471887 UMAD1C9J7I0 102 aa1.63□□□□□ -2.15
HDAC9-221ENST00000471887 NCR2O95944 276 aa1.63□□□□□ -2.15
HDAC9-221ENST00000471887 UBE2G2P60604 165 aa1.63□□□□□ -2.15
HDAC9-221ENST00000471887 RPS20P60866 119 aaKnown RBP1.63□□□□□ -2.15
HDAC9-221ENST00000471887 ZNF345Q14585 488 aa1.63□□□□□ -2.15
HDAC9-221ENST00000471887 Q5BKY6 102 aa1.63□□□□□ -2.15
HDAC9-221ENST00000471887 SPANXN1Q5VSR9 72 aa1.63□□□□□ -2.15
HDAC9-221ENST00000471887 CLPSL2Q6UWE3 100 aa1.63□□□□□ -2.15
HDAC9-221ENST00000471887 BAGE2Q86Y30 109 aa1.63□□□□□ -2.15
HDAC9-221ENST00000471887 STOML3Q8TAV4 291 aa1.63□□□□□ -2.15
HDAC9-221ENST00000471887 FAM210AQ96ND0 272 aa1.63□□□□□ -2.15
HDAC9-221ENST00000471887 CNFNQ9BYD5 112 aa1.63□□□□□ -2.15
HDAC9-221ENST00000471887 LINC00474Q9P2X8 69 aa1.63□□□□□ -2.15
HDAC9-221ENST00000471887 MUC2Q02817 5179 aa1.62□□□□□ -2.15
HDAC9-221ENST00000471887 FXYD6-FXYD2A0A087WZ82 144 aa1.62□□□□□ -2.15
HDAC9-221ENST00000471887 A0A096LNI7 61 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms