RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 TINCRA0A1B0GVN0 87 aa2.97□□□□□ -1.93
CCDC39-202ENST00000471307 NCR2O95944 276 aa2.97□□□□□ -1.93
CCDC39-202ENST00000471307 NPYP01303 97 aa2.97□□□□□ -1.93
CCDC39-202ENST00000471307 LINC00614P0C842 121 aa2.97□□□□□ -1.93
CCDC39-202ENST00000471307 CRYBA4P53673 196 aa2.97□□□□□ -1.93
CCDC39-202ENST00000471307 POLR2KP53803 58 aaKnown RBP2.97□□□□□ -1.93
CCDC39-202ENST00000471307 RHOHQ15669 191 aa2.97□□□□□ -1.93
CCDC39-202ENST00000471307 FAM19A5Q7Z5A7 132 aaPredicted RBP2.97□□□□□ -1.93
CCDC39-202ENST00000471307 NIT1Q86X76 327 aa2.97□□□□□ -1.93
CCDC39-202ENST00000471307 BAGE3Q86Y29 109 aa2.97□□□□□ -1.93
CCDC39-202ENST00000471307 Q8N8P6 123 aa2.97□□□□□ -1.93
CCDC39-202ENST00000471307 C18orf32Q8TCD1 76 aa2.97□□□□□ -1.93
CCDC39-202ENST00000471307 CHAC1Q9BUX1 264 aa2.97□□□□□ -1.93
CCDC39-202ENST00000471307 DNAH9Q9NYC9 4486 aa2.97□□□□□ -1.93
CCDC39-202ENST00000471307 DEFB131BA0A096LNP1 70 aa2.96□□□□□ -1.94
CCDC39-202ENST00000471307 TRAV10A0A0B4J240 114 aa2.96□□□□□ -1.94
CCDC39-202ENST00000471307 A0A0U1RQV1 116 aa2.96□□□□□ -1.94
CCDC39-202ENST00000471307 SDHAF1A6NFY7 115 aa2.96□□□□□ -1.94
CCDC39-202ENST00000471307 LINC01546A6NGU7 62 aa2.96□□□□□ -1.94
CCDC39-202ENST00000471307 LINC01549A6NIU2 74 aa2.96□□□□□ -1.94
CCDC39-202ENST00000471307 I3L3M4 83 aa2.96□□□□□ -1.94
CCDC39-202ENST00000471307 P0DMU3 169 aa2.96□□□□□ -1.94
CCDC39-202ENST00000471307 FAM231AP0DMU4 169 aa2.96□□□□□ -1.94
CCDC39-202ENST00000471307 FAM231CP0DMU5 169 aa2.96□□□□□ -1.94
CCDC39-202ENST00000471307 ESDP10768 282 aa2.96□□□□□ -1.94
CCDC39-202ENST00000471307 G0S2P27469 103 aa2.96□□□□□ -1.94
CCDC39-202ENST00000471307 IFI27P40305 119 aaPredicted RBP2.96□□□□□ -1.94
CCDC39-202ENST00000471307 NDUFA6P56556 154 aa2.96□□□□□ -1.94
CCDC39-202ENST00000471307 TMEM97Q5BJF2 176 aa2.96□□□□□ -1.94
CCDC39-202ENST00000471307 FA2HQ7L5A8 372 aa2.96□□□□□ -1.94
CCDC39-202ENST00000471307 DAZ4Q86SG3 579 aaKnown RBP2.96□□□□□ -1.94
CCDC39-202ENST00000471307 ZNRF2Q8NHG8 242 aa2.96□□□□□ -1.94
CCDC39-202ENST00000471307 CHCHD1Q96BP2 118 aaKnown RBP2.96□□□□□ -1.94
CCDC39-202ENST00000471307 RPL39LQ96EH5 51 aaKnown RBP2.96□□□□□ -1.94
CCDC39-202ENST00000471307 TMEM70Q9BUB7 260 aa2.96□□□□□ -1.94
CCDC39-202ENST00000471307 SMIM2Q9BVW6 85 aa2.96□□□□□ -1.94
CCDC39-202ENST00000471307 HUWE1Q7Z6Z7 4374 aaKnown RBP2.96□□□□□ -1.94
CCDC39-202ENST00000471307 PRKDCP78527 4128 aaKnown RBP2.95□□□□□ -1.94
CCDC39-202ENST00000471307 FBN3Q75N90 2809 aa2.95□□□□□ -1.94
CCDC39-202ENST00000471307 IGLV2-18A0A075B6J9 118 aa2.95□□□□□ -1.94
CCDC39-202ENST00000471307 TRAV8-3A0A0A6YYJ7 113 aa2.95□□□□□ -1.94
CCDC39-202ENST00000471307 A0A0J9YY99 117 aa2.95□□□□□ -1.94
CCDC39-202ENST00000471307 HTN3P15516 51 aa2.95□□□□□ -1.94
CCDC39-202ENST00000471307 UBE2D3P61077 147 aa2.95□□□□□ -1.94
CCDC39-202ENST00000471307 UBE2D2P62837 147 aa2.95□□□□□ -1.94
CCDC39-202ENST00000471307 IQCJQ1A5X6 159 aa2.95□□□□□ -1.94
CCDC39-202ENST00000471307 IGFL1Q6UW32 110 aa2.95□□□□□ -1.94
CCDC39-202ENST00000471307 C15orf53Q8NAA6 179 aa2.95□□□□□ -1.94
CCDC39-202ENST00000471307 ATP6V0E2Q8NHE4 81 aa2.95□□□□□ -1.94
CCDC39-202ENST00000471307 GTSF1LQ9H1H1 148 aa2.95□□□□□ -1.94
CCDC39-202ENST00000471307 ICOSQ9Y6W8 199 aa2.95□□□□□ -1.94
CCDC39-202ENST00000471307 TGP01266 2768 aa2.95□□□□□ -1.94
CCDC39-202ENST00000471307 BPY2O14599 106 aa2.94□□□□□ -1.94
CCDC39-202ENST00000471307 LINC00694P0DN24 101 aa2.94□□□□□ -1.94
CCDC39-202ENST00000471307 FCER1GP30273 86 aa2.94□□□□□ -1.94
CCDC39-202ENST00000471307 SMAGPQ0VAQ4 97 aa2.94□□□□□ -1.94
CCDC39-202ENST00000471307 SCGB1D4Q6XE38 83 aa2.94□□□□□ -1.94
CCDC39-202ENST00000471307 NEGR1Q7Z3B1 354 aa2.94□□□□□ -1.94
CCDC39-202ENST00000471307 Q8N976 141 aa2.94□□□□□ -1.94
CCDC39-202ENST00000471307 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
CCDC39-202ENST00000471307 TRBV25-1A0A075B6N4 114 aa2.93□□□□□ -1.94
CCDC39-202ENST00000471307 A0A096LPF7 62 aa2.93□□□□□ -1.94
CCDC39-202ENST00000471307 TRBV6-8A0A0A6YYG3 113 aa2.93□□□□□ -1.94
CCDC39-202ENST00000471307 IGHV1-24A0A0C4DH33 117 aa2.93□□□□□ -1.94
CCDC39-202ENST00000471307 TMEM223A0PJW6 202 aa2.93□□□□□ -1.94
CCDC39-202ENST00000471307 NUPR2A6NF83 97 aa2.93□□□□□ -1.94
CCDC39-202ENST00000471307 NUPR1O60356 82 aa2.93□□□□□ -1.94
CCDC39-202ENST00000471307 S100A2P29034 98 aa2.93□□□□□ -1.94
CCDC39-202ENST00000471307 TCTAP57738 103 aa2.93□□□□□ -1.94
CCDC39-202ENST00000471307 NTM-AS1Q6ZSK4 140 aa2.93□□□□□ -1.94
CCDC39-202ENST00000471307 HIST3H2BBQ8N257 126 aa2.93□□□□□ -1.94
CCDC39-202ENST00000471307 CHCHD7Q9BUK0 85 aa2.93□□□□□ -1.94
CCDC39-202ENST00000471307 KLK5Q9Y337 293 aaPredicted RBP2.93□□□□□ -1.94
CCDC39-202ENST00000471307 IGLL5B9A064 214 aa2.92□□□□□ -1.94
CCDC39-202ENST00000471307 LEPROTL1O95214 131 aa2.92□□□□□ -1.94
CCDC39-202ENST00000471307 HBDP02042 147 aa2.92□□□□□ -1.94
CCDC39-202ENST00000471307 PKIAP61925 76 aa2.92□□□□□ -1.94
CCDC39-202ENST00000471307 MOBPQ13875 183 aa2.92□□□□□ -1.94
CCDC39-202ENST00000471307 BATFQ16520 125 aa2.92□□□□□ -1.94
CCDC39-202ENST00000471307 C4orf26Q17RF5 130 aa2.92□□□□□ -1.94
CCDC39-202ENST00000471307 LELP1Q5T871 98 aa2.92□□□□□ -1.94
CCDC39-202ENST00000471307 LYPD5Q6UWN5 251 aa2.92□□□□□ -1.94
CCDC39-202ENST00000471307 FAM19A2Q8N3H0 131 aa2.92□□□□□ -1.94
CCDC39-202ENST00000471307 TOMM6Q96B49 74 aa2.92□□□□□ -1.94
CCDC39-202ENST00000471307 TMEM141Q96I45 108 aa2.92□□□□□ -1.94
CCDC39-202ENST00000471307 TIMM21Q9BVV7 248 aa2.92□□□□□ -1.94
CCDC39-202ENST00000471307 HSPB8Q9UJY1 196 aa2.92□□□□□ -1.94
CCDC39-202ENST00000471307 CYSLTR1Q9Y271 337 aa2.92□□□□□ -1.94
CCDC39-202ENST00000471307 TENM2Q9NT68 2774 aa2.92□□□□□ -1.94
CCDC39-202ENST00000471307 A0A1B0GVX0 72 aa2.91□□□□□ -1.94
CCDC39-202ENST00000471307 IGIPA6NJ69 53 aa2.91□□□□□ -1.94
CCDC39-202ENST00000471307 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.91□□□□□ -1.94
CCDC39-202ENST00000471307 UBE2L6O14933 153 aa2.91□□□□□ -1.94
CCDC39-202ENST00000471307 FABP4P15090 132 aa2.91□□□□□ -1.94
CCDC39-202ENST00000471307 ZNF25P17030 456 aaPredicted RBP2.91□□□□□ -1.94
CCDC39-202ENST00000471307 CCL18P55774 89 aa2.91□□□□□ -1.94
CCDC39-202ENST00000471307 PMCHL1Q16048 86 aa2.91□□□□□ -1.94
CCDC39-202ENST00000471307 ESRGQ1W209 222 aa2.91□□□□□ -1.94
CCDC39-202ENST00000471307 MUC7Q8TAX7 377 aa2.91□□□□□ -1.94
CCDC39-202ENST00000471307 DEFB104AQ8WTQ1 72 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms