RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 AP5S1Q9NUS5 200 aa3.77□□□□□ -1.81
VARS-222ENST00000470953 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.76□□□□□ -1.81
VARS-222ENST00000470953 TRAV8-4A0A0B4J246 113 aa3.76□□□□□ -1.81
VARS-222ENST00000470953 hDV102S1A0JD36 115 aa3.76□□□□□ -1.81
VARS-222ENST00000470953 IGKV2-29A2NJV5 120 aaPredicted RBP3.76□□□□□ -1.81
VARS-222ENST00000470953 I3L3M4 83 aa3.76□□□□□ -1.81
VARS-222ENST00000470953 CAMPP49913 170 aa3.76□□□□□ -1.81
VARS-222ENST00000470953 FOXA3P55318 350 aaPredicted RBP3.76□□□□□ -1.81
VARS-222ENST00000470953 DGAT2L7PQ6IED9 249 aa3.76□□□□□ -1.81
VARS-222ENST00000470953 ENHOQ6UWT2 76 aa3.76□□□□□ -1.81
VARS-222ENST00000470953 AMN1Q8IY45 258 aa3.76□□□□□ -1.81
VARS-222ENST00000470953 NUP35Q8NFH5 326 aa3.76□□□□□ -1.81
VARS-222ENST00000470953 KIR2DL4Q99706 377 aa3.76□□□□□ -1.81
VARS-222ENST00000470953 TMEM191AQ9H0A3 160 aa3.76□□□□□ -1.81
VARS-222ENST00000470953 V9GYV3 84 aa3.76□□□□□ -1.81
VARS-222ENST00000470953 IGLV4-60A0A075B6I1 120 aa3.75□□□□□ -1.81
VARS-222ENST00000470953 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.75□□□□□ -1.81
VARS-222ENST00000470953 A0A1B0GUV1 79 aa3.75□□□□□ -1.81
VARS-222ENST00000470953 SMKR1H3BMG3 65 aa3.75□□□□□ -1.81
VARS-222ENST00000470953 ZNF561-AS1K7EIQ3 104 aa3.75□□□□□ -1.81
VARS-222ENST00000470953 SPINK8P0C7L1 97 aa3.75□□□□□ -1.81
VARS-222ENST00000470953 FGF6P10767 208 aa3.75□□□□□ -1.81
VARS-222ENST00000470953 HBBP68871 147 aa3.75□□□□□ -1.81
VARS-222ENST00000470953 C20orf203Q8NBC4 194 aa3.75□□□□□ -1.81
VARS-222ENST00000470953 MAP1LC3AQ9H492 121 aa3.75□□□□□ -1.81
VARS-222ENST00000470953 PRR34Q9NV39 138 aa3.75□□□□□ -1.81
VARS-222ENST00000470953 PRO0628Q9UI54 55 aa3.75□□□□□ -1.81
VARS-222ENST00000470953 V9GYY9 64 aa3.75□□□□□ -1.81
VARS-222ENST00000470953 H7C423 109 aa3.74□□□□□ -1.81
VARS-222ENST00000470953 FABP2P12104 132 aa3.74□□□□□ -1.81
VARS-222ENST00000470953 CKS2P33552 79 aa3.74□□□□□ -1.81
VARS-222ENST00000470953 KRTAP10-8P60410 259 aa3.74□□□□□ -1.81
VARS-222ENST00000470953 SUMO2P61956 95 aaKnown RBP3.74□□□□□ -1.81
VARS-222ENST00000470953 SLC25A34Q6PIV7 304 aa3.74□□□□□ -1.81
VARS-222ENST00000470953 C18orf32Q8TCD1 76 aa3.74□□□□□ -1.81
VARS-222ENST00000470953 LINC01600Q96MT4 127 aa3.74□□□□□ -1.81
VARS-222ENST00000470953 TRBV6-5A0A0K0K1A5 114 aa3.73□□□□□ -1.81
VARS-222ENST00000470953 SMIM27A0A1W2PRY6 76 aa3.73□□□□□ -1.81
VARS-222ENST00000470953 VCYO14598 125 aa3.73□□□□□ -1.81
VARS-222ENST00000470953 HSBP1O75506 76 aa3.73□□□□□ -1.81
VARS-222ENST00000470953 TSHBP01222 138 aa3.73□□□□□ -1.81
VARS-222ENST00000470953 MALP21145 153 aa3.73□□□□□ -1.81
VARS-222ENST00000470953 XCL1P47992 114 aa3.73□□□□□ -1.81
VARS-222ENST00000470953 SS18Q15532 418 aa3.73□□□□□ -1.81
VARS-222ENST00000470953 Q6ZUT4 128 aa3.73□□□□□ -1.81
VARS-222ENST00000470953 Q6ZVH6 145 aa3.73□□□□□ -1.81
VARS-222ENST00000470953 CHCHD10Q8WYQ3 142 aaPredicted RBP3.73□□□□□ -1.81
VARS-222ENST00000470953 RNF185Q96GF1 192 aa3.73□□□□□ -1.81
VARS-222ENST00000470953 SPCS1Q9Y6A9 102 aa3.73□□□□□ -1.81
VARS-222ENST00000470953 IGHV3-64A0A075B6Q5 118 aa3.72□□□□□ -1.81
VARS-222ENST00000470953 TRBV27A0A0K0K1C4 114 aa3.72□□□□□ -1.81
VARS-222ENST00000470953 A0A1W2PPM0 123 aa3.72□□□□□ -1.81
VARS-222ENST00000470953 D6R8Y8 96 aa3.72□□□□□ -1.81
VARS-222ENST00000470953 MT-ND6P03923 174 aa3.72□□□□□ -1.81
VARS-222ENST00000470953 PRSS1P07477 247 aa3.72□□□□□ -1.81
VARS-222ENST00000470953 NDUFV3P56181 108 aaKnown RBP3.72□□□□□ -1.81
VARS-222ENST00000470953 FOXI1Q12951 378 aa3.72□□□□□ -1.81
VARS-222ENST00000470953 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
VARS-222ENST00000470953 MRPL51Q4U2R6 128 aaKnown RBP3.72□□□□□ -1.81
VARS-222ENST00000470953 HIGD2BQ4VC39 106 aa3.72□□□□□ -1.81
VARS-222ENST00000470953 FAM104BQ5XKR9 115 aa3.72□□□□□ -1.81
VARS-222ENST00000470953 ATP5L2Q7Z4Y8 100 aa3.72□□□□□ -1.81
VARS-222ENST00000470953 ORMDL3Q8N138 153 aa3.72□□□□□ -1.81
VARS-222ENST00000470953 DPH3Q96FX2 82 aa3.72□□□□□ -1.81
VARS-222ENST00000470953 PKIGQ9Y2B9 76 aa3.72□□□□□ -1.81
VARS-222ENST00000470953 TRAPPC1Q9Y5R8 145 aa3.72□□□□□ -1.81
VARS-222ENST00000470953 TINCRA0A1B0GVN0 87 aa3.71□□□□□ -1.82
VARS-222ENST00000470953 C9JAW5 83 aa3.71□□□□□ -1.82
VARS-222ENST00000470953 LINC01547P58512 204 aaPredicted RBP3.71□□□□□ -1.82
VARS-222ENST00000470953 FAM19A5Q7Z5A7 132 aaPredicted RBP3.71□□□□□ -1.82
VARS-222ENST00000470953 NRACQ8N912 160 aa3.71□□□□□ -1.82
VARS-222ENST00000470953 C20orf78Q9BR46 151 aa3.71□□□□□ -1.82
VARS-222ENST00000470953 SMIM2Q9BVW6 85 aa3.71□□□□□ -1.82
VARS-222ENST00000470953 CDIP1Q9H305 208 aa3.71□□□□□ -1.82
VARS-222ENST00000470953 TRAV13-1A0A0B4J241 112 aa3.7□□□□□ -1.82
VARS-222ENST00000470953 IGHV1-58A0A0C4DH39 117 aa3.7□□□□□ -1.82
VARS-222ENST00000470953 A0A0J9YXV3 536 aa3.7□□□□□ -1.82
VARS-222ENST00000470953 A0A0U1RRA0 63 aa3.7□□□□□ -1.82
VARS-222ENST00000470953 NPYP01303 97 aa3.7□□□□□ -1.82
VARS-222ENST00000470953 IFITM1P13164 125 aa3.7□□□□□ -1.82
VARS-222ENST00000470953 IFI27P40305 119 aaPredicted RBP3.7□□□□□ -1.82
VARS-222ENST00000470953 POLR2KP53803 58 aaKnown RBP3.7□□□□□ -1.82
VARS-222ENST00000470953 LINC00310P59036 64 aa3.7□□□□□ -1.82
VARS-222ENST00000470953 KRTDAPP60985 99 aa3.7□□□□□ -1.82
VARS-222ENST00000470953 CNBPP62633 177 aaKnown RBP3.7□□□□□ -1.82
VARS-222ENST00000470953 RNASE13Q5GAN3 156 aaKnown RBP3.7□□□□□ -1.82
VARS-222ENST00000470953 PRELID3AQ96N28 172 aa3.7□□□□□ -1.82
VARS-222ENST00000470953 IGKV2-24A0A0C4DH68 120 aa3.69□□□□□ -1.82
VARS-222ENST00000470953 LOC389332A0A1B0GUA5 103 aa3.69□□□□□ -1.82
VARS-222ENST00000470953 LINC00959A0A1B0GUT2 108 aa3.69□□□□□ -1.82
VARS-222ENST00000470953 A0A1B0GXF2 115 aa3.69□□□□□ -1.82
VARS-222ENST00000470953 H3BMG7 143 aa3.69□□□□□ -1.82
VARS-222ENST00000470953 COX7A2LO14548 114 aa3.69□□□□□ -1.82
VARS-222ENST00000470953 SERF1AO75920 110 aa3.69□□□□□ -1.82
VARS-222ENST00000470953 APOMO95445 188 aa3.69□□□□□ -1.82
VARS-222ENST00000470953 C3orf79P0CE67 100 aa3.69□□□□□ -1.82
VARS-222ENST00000470953 MEIG1Q5JSS6 88 aa3.69□□□□□ -1.82
VARS-222ENST00000470953 CD164L2Q6UWJ8 174 aa3.69□□□□□ -1.82
VARS-222ENST00000470953 TMEM136Q6ZRR5 245 aa3.69□□□□□ -1.82
VARS-222ENST00000470953 BAGE3Q86Y29 109 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms