RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 FCGBPQ9Y6R7 5405 aaPredicted RBP6.63□□□□□ -1.35
LSM2-209ENST00000470083 IGLV5-37A0A075B6J1 123 aa6.63□□□□□ -1.35
LSM2-209ENST00000470083 HIGD1CA8MV81 97 aa6.63□□□□□ -1.35
LSM2-209ENST00000470083 ZNF345Q14585 488 aa6.63□□□□□ -1.35
LSM2-209ENST00000470083 C6orf226Q5I0X4 101 aa6.63□□□□□ -1.35
LSM2-209ENST00000470083 Q8IZM0 81 aa6.63□□□□□ -1.35
LSM2-209ENST00000470083 C20orf78Q9BR46 151 aa6.63□□□□□ -1.35
LSM2-209ENST00000470083 TOMM7Q9P0U1 55 aa6.63□□□□□ -1.35
LSM2-209ENST00000470083 NDUFA12Q9UI09 145 aa6.63□□□□□ -1.35
LSM2-209ENST00000470083 FLGP20930 4061 aaPredicted RBP6.63□□□□□ -1.35
LSM2-209ENST00000470083 F8VRH5 84 aa6.62□□□□□ -1.35
LSM2-209ENST00000470083 TEX46H3BTG2 121 aa6.62□□□□□ -1.35
LSM2-209ENST00000470083 SPINK1P00995 79 aa6.62□□□□□ -1.35
LSM2-209ENST00000470083 Q6ZN92 141 aa6.62□□□□□ -1.35
LSM2-209ENST00000470083 IGKV2-28A0A075B6P5 120 aa6.61□□□□□ -1.35
LSM2-209ENST00000470083 IGKV2D-28P01615 120 aa6.61□□□□□ -1.35
LSM2-209ENST00000470083 Q8NBF4 154 aa6.61□□□□□ -1.35
LSM2-209ENST00000470083 TRBV24-1A0A075B6N3 115 aa6.6□□□□□ -1.35
LSM2-209ENST00000470083 IFI27P40305 119 aaPredicted RBP6.6□□□□□ -1.35
LSM2-209ENST00000470083 FAM19A1Q7Z5A9 133 aa6.6□□□□□ -1.35
LSM2-209ENST00000470083 NKAPP1Q8N9T2 125 aa6.6□□□□□ -1.35
LSM2-209ENST00000470083 ALKBH7Q9BT30 221 aaPredicted RBP6.6□□□□□ -1.35
LSM2-209ENST00000470083 IGLV8-61A0A075B6I0 122 aa6.59□□□□□ -1.35
LSM2-209ENST00000470083 IGLV4-3A0A075B6K6 122 aa6.59□□□□□ -1.35
LSM2-209ENST00000470083 FAM19A2Q8N3H0 131 aa6.59□□□□□ -1.35
LSM2-209ENST00000470083 SMIM2Q9BVW6 85 aa6.59□□□□□ -1.35
LSM2-209ENST00000470083 GNB1LQ9BYB4 327 aa6.59□□□□□ -1.35
LSM2-209ENST00000470083 PYGO1Q9Y3Y4 419 aa6.59□□□□□ -1.35
LSM2-209ENST00000470083 KANTRA0A1W2PQU2 76 aa6.58□□□□□ -1.36
LSM2-209ENST00000470083 LINC00862A6NCI5 91 aa6.58□□□□□ -1.36
LSM2-209ENST00000470083 RIGQ13278 110 aa6.58□□□□□ -1.36
LSM2-209ENST00000470083 MRPL51Q4U2R6 128 aaKnown RBP6.58□□□□□ -1.36
LSM2-209ENST00000470083 TMEM141Q96I45 108 aa6.58□□□□□ -1.36
LSM2-209ENST00000470083 TMEM126AQ9H061 195 aa6.58□□□□□ -1.36
LSM2-209ENST00000470083 TAGLN2P37802 199 aaKnown RBP6.57□□□□□ -1.36
LSM2-209ENST00000470083 PCOTHQ58A44 107 aa6.57□□□□□ -1.36
LSM2-209ENST00000470083 FAM104BQ5XKR9 115 aa6.57□□□□□ -1.36
LSM2-209ENST00000470083 TEX43Q6ZNM6 134 aa6.57□□□□□ -1.36
LSM2-209ENST00000470083 CBLN2Q8IUK8 224 aa6.57□□□□□ -1.36
LSM2-209ENST00000470083 SPRR4Q96PI1 79 aa6.57□□□□□ -1.36
LSM2-209ENST00000470083 MACF1Q9UPN3 7388 aaKnown RBP6.56□□□□□ -1.36
LSM2-209ENST00000470083 TMEM238C9JI98 176 aa6.56□□□□□ -1.36
LSM2-209ENST00000470083 SMLR1H3BR10 107 aa6.56□□□□□ -1.36
LSM2-209ENST00000470083 SCO1O75880 301 aa6.56□□□□□ -1.36
LSM2-209ENST00000470083 CXCL5P42830 114 aa6.56□□□□□ -1.36
LSM2-209ENST00000470083 Q8N377 158 aa6.56□□□□□ -1.36
LSM2-209ENST00000470083 C2orf88Q9BSF0 95 aa6.56□□□□□ -1.36
LSM2-209ENST00000470083 EIF5A2Q9GZV4 153 aaKnown RBP6.56□□□□□ -1.36
LSM2-209ENST00000470083 M0R378 163 aa6.55□□□□□ -1.36
LSM2-209ENST00000470083 CKS2P33552 79 aa6.55□□□□□ -1.36
LSM2-209ENST00000470083 RPS29P62273 56 aaKnown RBP6.55□□□□□ -1.36
LSM2-209ENST00000470083 HIGD2AQ9BW72 106 aa6.55□□□□□ -1.36
LSM2-209ENST00000470083 SYNE2Q8WXH0 6885 aaKnown RBP6.54□□□□□ -1.36
LSM2-209ENST00000470083 HMSDA8MTL9 139 aa6.53□□□□□ -1.36
LSM2-209ENST00000470083 SLC25A20O43772 301 aa6.53□□□□□ -1.36
LSM2-209ENST00000470083 ZNF706Q9Y5V0 76 aaPredicted RBP6.53□□□□□ -1.36
LSM2-209ENST00000470083 TMEM250H0YL14 139 aa6.52□□□□□ -1.37
LSM2-209ENST00000470083 RAB5AP20339 215 aa6.52□□□□□ -1.37
LSM2-209ENST00000470083 ZC2HC1BQ5TFG8 222 aa6.52□□□□□ -1.37
LSM2-209ENST00000470083 FAM19A3Q7Z5A8 133 aa6.52□□□□□ -1.37
LSM2-209ENST00000470083 AMELXQ99217 191 aa6.52□□□□□ -1.37
LSM2-209ENST00000470083 CDKN2A-AS1Q9UH64 79 aa6.52□□□□□ -1.37
LSM2-209ENST00000470083 D6R8Y8 96 aa6.51□□□□□ -1.37
LSM2-209ENST00000470083 NPYP01303 97 aa6.51□□□□□ -1.37
LSM2-209ENST00000470083 OSTCQ9NRP0 149 aa6.51□□□□□ -1.37
LSM2-209ENST00000470083 HERVK_113P63121 156 aa6.5□□□□□ -1.37
LSM2-209ENST00000470083 C2orf66Q6UXQ4 117 aa6.5□□□□□ -1.37
LSM2-209ENST00000470083 COX6B2Q6YFQ2 88 aa6.5□□□□□ -1.37
LSM2-209ENST00000470083 LINC01551Q86U37 167 aa6.5□□□□□ -1.37
LSM2-209ENST00000470083 VCX2Q9H322 139 aa6.5□□□□□ -1.37
LSM2-209ENST00000470083 GEMIN7Q9H840 131 aaKnown RBP6.5□□□□□ -1.37
LSM2-209ENST00000470083 VPREB1P12018 145 aa6.49□□□□□ -1.37
LSM2-209ENST00000470083 RAB5BP61020 215 aa6.49□□□□□ -1.37
LSM2-209ENST00000470083 SEC11AP67812 179 aa6.49□□□□□ -1.37
LSM2-209ENST00000470083 NAT8BQ9UHF3 227 aa6.49□□□□□ -1.37
LSM2-209ENST00000470083 V9GYV3 84 aa6.49□□□□□ -1.37
LSM2-209ENST00000470083 A0A1B0GW15 77 aa6.47□□□□□ -1.37
LSM2-209ENST00000470083 SMIM1B2RUZ4 78 aa6.47□□□□□ -1.37
LSM2-209ENST00000470083 PPBPP02775 128 aa6.47□□□□□ -1.37
LSM2-209ENST00000470083 NPSP0C0P6 89 aa6.47□□□□□ -1.37
LSM2-209ENST00000470083 KRTAP4-16G5E9R7 235 aaPredicted RBP6.46□□□□□ -1.38
LSM2-209ENST00000470083 CEBPGP53567 150 aa6.46□□□□□ -1.38
LSM2-209ENST00000470083 COX7B2Q8TF08 81 aa6.46□□□□□ -1.38
LSM2-209ENST00000470083 SMIM7Q9BQ49 75 aa6.46□□□□□ -1.38
LSM2-209ENST00000470083 CYSLTR1Q9Y271 337 aa6.46□□□□□ -1.38
LSM2-209ENST00000470083 CFC1P0CG37 223 aa6.45□□□□□ -1.38
LSM2-209ENST00000470083 FAM74A3Q4VXF1 159 aa6.45□□□□□ -1.38
LSM2-209ENST00000470083 LINC00483Q53H64 154 aa6.45□□□□□ -1.38
LSM2-209ENST00000470083 PDZD11Q5EBL8 140 aa6.45□□□□□ -1.38
LSM2-209ENST00000470083 IGIPA6NJ69 53 aa6.44□□□□□ -1.38
LSM2-209ENST00000470083 F8W036 122 aa6.44□□□□□ -1.38
LSM2-209ENST00000470083 RPL24P83731 157 aaKnown RBP6.44□□□□□ -1.38
LSM2-209ENST00000470083 MOBPQ13875 183 aa6.44□□□□□ -1.38
LSM2-209ENST00000470083 SSBP3-AS1Q7Z2R9 100 aa6.44□□□□□ -1.38
LSM2-209ENST00000470083 KRTAP4-12Q9BQ66 201 aa6.44□□□□□ -1.38
LSM2-209ENST00000470083 ORMDL3Q8N138 153 aa6.43□□□□□ -1.38
LSM2-209ENST00000470083 SMIM27A0A1W2PRY6 76 aa6.42□□□□□ -1.38
LSM2-209ENST00000470083 S100A8P05109 93 aa6.42□□□□□ -1.38
LSM2-209ENST00000470083 PAPPA-AS1Q5QFB9 102 aa6.42□□□□□ -1.38
LSM2-209ENST00000470083 KRTAP19-1Q8IUB9 90 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms