RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 LAMTOR3Q9UHA4 124 aa7.21□□□□□ -1.26
NUP50-214ENST00000469163 LYPD1Q8N2G4 141 aa7.2□□□□□ -1.26
NUP50-214ENST00000469163 TRRAPQ9Y4A5 3859 aa7.2□□□□□ -1.26
NUP50-214ENST00000469163 A0A087WWL8 130 aa7.2□□□□□ -1.26
NUP50-214ENST00000469163 IGHV7-4-1A0A0J9YVY3 117 aa7.2□□□□□ -1.26
NUP50-214ENST00000469163 TSHBP01222 138 aa7.2□□□□□ -1.26
NUP50-214ENST00000469163 C1orf158Q8N1D5 194 aa7.2□□□□□ -1.26
NUP50-214ENST00000469163 SMAD5-AS1Q9Y6J3 95 aa7.2□□□□□ -1.26
NUP50-214ENST00000469163 GNRH2O43555 120 aa7.19□□□□□ -1.26
NUP50-214ENST00000469163 OPRPNQ99935 248 aaPredicted RBP7.19□□□□□ -1.26
NUP50-214ENST00000469163 IGHV3-16A0A0C4DH30 117 aa7.19□□□□□ -1.26
NUP50-214ENST00000469163 PHLDA3Q9Y5J5 127 aa7.19□□□□□ -1.26
NUP50-214ENST00000469163 LRCOL1A6NCL2 159 aa7.19□□□□□ -1.26
NUP50-214ENST00000469163 SDHAF1A6NFY7 115 aa7.19□□□□□ -1.26
NUP50-214ENST00000469163 OXLD1Q5BKU9 147 aa7.18□□□□□ -1.26
NUP50-214ENST00000469163 NDUFA4O00483 81 aa7.18□□□□□ -1.26
NUP50-214ENST00000469163 NDUFA12Q9UI09 145 aa7.18□□□□□ -1.26
NUP50-214ENST00000469163 TRAV21A0A0B4J279 112 aa7.18□□□□□ -1.26
NUP50-214ENST00000469163 TRAV7A0A075B6U4 112 aa7.17□□□□□ -1.26
NUP50-214ENST00000469163 MIAQ16674 131 aa7.17□□□□□ -1.26
NUP50-214ENST00000469163 TIMM17AQ99595 171 aa7.17□□□□□ -1.26
NUP50-214ENST00000469163 ZFAND3Q9H8U3 227 aa7.17□□□□□ -1.26
NUP50-214ENST00000469163 TRBV27A0A0K0K1C4 114 aa7.17□□□□□ -1.26
NUP50-214ENST00000469163 SOCS3O14543 225 aa7.17□□□□□ -1.26
NUP50-214ENST00000469163 IGHV3-30-3P0DP02 117 aa7.17□□□□□ -1.26
NUP50-214ENST00000469163 IGKV3D-20A0A0C4DH25 116 aa7.17□□□□□ -1.26
NUP50-214ENST00000469163 A0A0J9YXV3 536 aa7.17□□□□□ -1.26
NUP50-214ENST00000469163 CLPSL1A2RUU4 121 aa7.17□□□□□ -1.26
NUP50-214ENST00000469163 ZNF876PQ49A33 203 aa7.17□□□□□ -1.26
NUP50-214ENST00000469163 IGKV3OR2-268A0A0C4DH90 116 aa7.16□□□□□ -1.26
NUP50-214ENST00000469163 PSPHP1O15172 72 aa7.16□□□□□ -1.26
NUP50-214ENST00000469163 KLKP1Q107X0 134 aa7.16□□□□□ -1.26
NUP50-214ENST00000469163 Q8N2B8 174 aa7.16□□□□□ -1.26
NUP50-214ENST00000469163 DEFB130BP0DP73 79 aa7.16□□□□□ -1.26
NUP50-214ENST00000469163 DEFB130AP0DP74 79 aa7.16□□□□□ -1.26
NUP50-214ENST00000469163 TRAV13-2A0A0B4J235 113 aa7.15□□□□□ -1.26
NUP50-214ENST00000469163 ESRGQ1W209 222 aa7.15□□□□□ -1.26
NUP50-214ENST00000469163 C9orf129Q5T035 196 aaKnown RBP7.15□□□□□ -1.26
NUP50-214ENST00000469163 NCR3O14931 201 aa7.15□□□□□ -1.26
NUP50-214ENST00000469163 IGHV1-58A0A0C4DH39 117 aa7.15□□□□□ -1.27
NUP50-214ENST00000469163 IGIPA6NJ69 53 aa7.15□□□□□ -1.27
NUP50-214ENST00000469163 ZNF575Q86XF7 245 aa7.15□□□□□ -1.27
NUP50-214ENST00000469163 SPATA3Q8NHX4 192 aa7.15□□□□□ -1.27
NUP50-214ENST00000469163 TMEM141Q96I45 108 aa7.15□□□□□ -1.27
NUP50-214ENST00000469163 FAM218AQ96MZ4 157 aa7.15□□□□□ -1.27
NUP50-214ENST00000469163 A0A096LPF7 62 aa7.14□□□□□ -1.27
NUP50-214ENST00000469163 KRTAP1-1Q07627 177 aa7.14□□□□□ -1.27
NUP50-214ENST00000469163 FAM222AQ5U5X8 452 aa7.14□□□□□ -1.27
NUP50-214ENST00000469163 ATP5EP56381 51 aaPredicted RBP7.14□□□□□ -1.27
NUP50-214ENST00000469163 DGAT2L7PQ6IED9 249 aa7.14□□□□□ -1.27
NUP50-214ENST00000469163 LITAFQ99732 161 aa7.14□□□□□ -1.27
NUP50-214ENST00000469163 C11orf21Q9P2W6 132 aa7.14□□□□□ -1.27
NUP50-214ENST00000469163 IGLV1-40P01703 118 aa7.13□□□□□ -1.27
NUP50-214ENST00000469163 C22orf24Q9Y442 160 aa7.13□□□□□ -1.27
NUP50-214ENST00000469163 SPTSSBQ8NFR3 76 aa7.13□□□□□ -1.27
NUP50-214ENST00000469163 KTN1-AS1Q86SY8 53 aa7.13□□□□□ -1.27
NUP50-214ENST00000469163 PIK3CD-AS1Q5SR53 167 aa7.12□□□□□ -1.27
NUP50-214ENST00000469163 A0A0J9YX75 114 aa7.12□□□□□ -1.27
NUP50-214ENST00000469163 NDUFC1O43677 76 aa7.12□□□□□ -1.27
NUP50-214ENST00000469163 MIFP14174 115 aa7.12□□□□□ -1.27
NUP50-214ENST00000469163 PDE6HQ13956 83 aa7.12□□□□□ -1.27
NUP50-214ENST00000469163 IGHV1OR15-1A0A075B7D0 117 aa7.11□□□□□ -1.27
NUP50-214ENST00000469163 K7EMT4 169 aa7.11□□□□□ -1.27
NUP50-214ENST00000469163 PRR9Q5T870 116 aa7.11□□□□□ -1.27
NUP50-214ENST00000469163 TRGV1A0A0A0MS02 117 aa7.11□□□□□ -1.27
NUP50-214ENST00000469163 TRGV2A0A075B6R0 118 aa7.11□□□□□ -1.27
NUP50-214ENST00000469163 TMEM256-PLSCR3K7ERE1 68 aa7.1□□□□□ -1.27
NUP50-214ENST00000469163 IGHV3-38A0A0C4DH36 116 aa7.1□□□□□ -1.27
NUP50-214ENST00000469163 DEFB135Q30KP9 77 aa7.1□□□□□ -1.27
NUP50-214ENST00000469163 BEAN1Q3B7T3 259 aa7.1□□□□□ -1.27
NUP50-214ENST00000469163 UBL5Q9BZL1 73 aa7.1□□□□□ -1.27
NUP50-214ENST00000469163 RNASE1P07998 156 aaKnown RBP7.1□□□□□ -1.27
NUP50-214ENST00000469163 TM2D3Q9BRN9 247 aa7.1□□□□□ -1.27
NUP50-214ENST00000469163 TRAV10A0A0B4J240 114 aa7.09□□□□□ -1.27
NUP50-214ENST00000469163 PPP1R17O96001 155 aa7.09□□□□□ -1.28
NUP50-214ENST00000469163 HAMPP81172 84 aa7.09□□□□□ -1.28
NUP50-214ENST00000469163 ATP5EP2Q5VTU8 51 aa7.09□□□□□ -1.28
NUP50-214ENST00000469163 GPHB5Q86YW7 130 aa7.09□□□□□ -1.28
NUP50-214ENST00000469163 C4orf3Q8WVX3 66 aa7.09□□□□□ -1.28
NUP50-214ENST00000469163 RNASE13Q5GAN3 156 aaKnown RBP7.08□□□□□ -1.28
NUP50-214ENST00000469163 COX8CQ7Z4L0 72 aa7.08□□□□□ -1.28
NUP50-214ENST00000469163 VCYO14598 125 aa7.08□□□□□ -1.28
NUP50-214ENST00000469163 FUSP35637 526 aaKnown RBP eCLIP7.07□□□□□ -1.28
NUP50-214ENST00000469163 DEFB114Q30KQ6 69 aa7.07□□□□□ -1.28
NUP50-214ENST00000469163 C8orf87E5RJ46 101 aa7.07□□□□□ -1.28
NUP50-214ENST00000469163 SLPIP03973 132 aa7.07□□□□□ -1.28
NUP50-214ENST00000469163 KRTAP24-1Q3LI83 254 aa7.07□□□□□ -1.28
NUP50-214ENST00000469163 M0R378 163 aa7.06□□□□□ -1.28
NUP50-214ENST00000469163 NOP10Q9NPE3 64 aaKnown RBP7.06□□□□□ -1.28
NUP50-214ENST00000469163 A8MU10 97 aa7.06□□□□□ -1.28
NUP50-214ENST00000469163 KRTAP10-3P60369 221 aa7.06□□□□□ -1.28
NUP50-214ENST00000469163 H3BUA1 57 aa7.06□□□□□ -1.28
NUP50-214ENST00000469163 LINC00308Q8TCZ7 52 aa7.06□□□□□ -1.28
NUP50-214ENST00000469163 MAP6D1Q9H9H5 199 aa7.06□□□□□ -1.28
NUP50-214ENST00000469163 MIR7-3HGQ8N6C7 128 aa7.05□□□□□ -1.28
NUP50-214ENST00000469163 A0A087WYN8 130 aa7.05□□□□□ -1.28
NUP50-214ENST00000469163 IBA57-AS1B1ANH7 110 aa7.05□□□□□ -1.28
NUP50-214ENST00000469163 LECT2O14960 151 aa7.05□□□□□ -1.28
NUP50-214ENST00000469163 PROK1P58294 105 aa7.05□□□□□ -1.28
NUP50-214ENST00000469163 FSHBP01225 129 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms