RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 CLEC2BQ92478 149 aa2.11□□□□□ -2.07
HMGB1P25-201ENST00000468402 MGST2Q99735 147 aa2.11□□□□□ -2.07
HMGB1P25-201ENST00000468402 SMR3AQ99954 134 aa2.11□□□□□ -2.07
HMGB1P25-201ENST00000468402 CACFD1Q9UGQ2 172 aa2.11□□□□□ -2.07
HMGB1P25-201ENST00000468402 SERP1Q9Y6X1 66 aa2.11□□□□□ -2.07
HMGB1P25-201ENST00000468402 CUBNO60494 3623 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 SORL1Q92673 2214 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 PTPN13Q12923 2485 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 IGKV3-7A0A075B6H7 116 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 IGKV2-24A0A0C4DH68 120 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 A0A0J9YX75 114 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 A0A1B0GU33 70 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 M0R2P5 195 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 SPINK4O60575 86 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 RNASE2P10153 161 aaKnown RBP2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 SNCAP37840 140 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 EFNA4P52798 201 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 DEFB1P60022 68 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 WT1-ASQ06250 92 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 ZNF345Q14585 488 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 Q6ZQT0 140 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 Q8NAQ8 132 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 C5orf17Q8NAS9 161 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 Q8NDZ9 215 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 ATP6V0E2Q8NHE4 81 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 TMEM254Q8TBM7 123 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 LSM10Q969L4 123 aaKnown RBP2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 ABCA12Q86UK0 2595 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 MYO18BQ8IUG5 2567 aa2.1□□□□□ -2.07
HMGB1P25-201ENST00000468402 GCN1Q92616 2671 aaKnown RBP2.09□□□□□ -2.07
HMGB1P25-201ENST00000468402 KMT2BQ9UMN6 2715 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P25-201ENST00000468402 UMAD1C9J7I0 102 aa2.09□□□□□ -2.07
HMGB1P25-201ENST00000468402 H3BUX3 64 aa2.09□□□□□ -2.07
HMGB1P25-201ENST00000468402 RTL8CO15255 209 aa2.09□□□□□ -2.07
HMGB1P25-201ENST00000468402 CRPP02741 224 aa2.09□□□□□ -2.07
HMGB1P25-201ENST00000468402 ARL14EPLP0DKL9 152 aa2.09□□□□□ -2.07
HMGB1P25-201ENST00000468402 HRES1P13985 223 aa2.09□□□□□ -2.07
HMGB1P25-201ENST00000468402 FXYD3Q14802 87 aa2.09□□□□□ -2.07
HMGB1P25-201ENST00000468402 UNQ5815/PRO19632Q6UWF5 114 aa2.09□□□□□ -2.07
HMGB1P25-201ENST00000468402 C10orf105Q8TEF2 133 aa2.09□□□□□ -2.07
HMGB1P25-201ENST00000468402 SLC50A1Q9BRV3 221 aa2.09□□□□□ -2.07
HMGB1P25-201ENST00000468402 SNHG12Q9BXW3 62 aa2.09□□□□□ -2.07
HMGB1P25-201ENST00000468402 PDZD2O15018 2839 aa2.09□□□□□ -2.07
HMGB1P25-201ENST00000468402 APCP25054 2843 aa2.09□□□□□ -2.07
HMGB1P25-201ENST00000468402 UBR5O95071 2799 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 CMYA5Q8N3K9 4069 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 MUC21A0A0G2JKD1 596 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 MUC21A0A140T8X8 626 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 IGLC7A0M8Q6 106 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 ODF3BA8MYP8 253 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 TMEM262E9PQX1 116 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 IGLV6-57P01721 117 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 BRS3P32247 399 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 KRTAP12-2P59991 146 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 NPC2P61916 151 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 PRCDQ00LT1 54 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 ADIRFQ15847 76 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 DEFB112Q30KQ8 113 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 KRTAP13-2Q52LG2 175 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 C2orf82Q6UX34 121 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 CYP2G1PQ6ZSU1 146 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 TMEM167AQ8TBQ9 72 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 LINC00526Q96FQ7 95 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 NDUFA4L2Q9NRX3 87 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 TMEM14BQ9NUH8 114 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 MED9Q9NWA0 146 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 TMEM242Q9NWH2 141 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 BET1LQ9NYM9 111 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 KAAG1Q9UBP8 84 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 ITPR3Q14573 2671 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 ACANP16112 2415 aa2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 SONP18583 2426 aaKnown RBP2.08□□□□□ -2.08
HMGB1P25-201ENST00000468402 CHD6Q8TD26 2715 aa2.07□□□□□ -2.08
HMGB1P25-201ENST00000468402 MXRA5Q9NR99 2828 aa2.07□□□□□ -2.08
HMGB1P25-201ENST00000468402 TLN2Q9Y4G6 2542 aa2.07□□□□□ -2.08
HMGB1P25-201ENST00000468402 TMSB15BA0A087X1C1 80 aa2.07□□□□□ -2.08
HMGB1P25-201ENST00000468402 CTXND1A0A1B0GTU2 59 aa2.07□□□□□ -2.08
HMGB1P25-201ENST00000468402 C7orf77A4D0Y5 90 aa2.07□□□□□ -2.08
HMGB1P25-201ENST00000468402 H3BQ15 152 aa2.07□□□□□ -2.08
HMGB1P25-201ENST00000468402 J3QKU1 62 aa2.07□□□□□ -2.08
HMGB1P25-201ENST00000468402 GCHFRP30047 84 aa2.07□□□□□ -2.08
HMGB1P25-201ENST00000468402 ZNF137PP52743 207 aa2.07□□□□□ -2.08
HMGB1P25-201ENST00000468402 PEA15Q15121 130 aa2.07□□□□□ -2.08
HMGB1P25-201ENST00000468402 DEFB136Q30KP8 78 aa2.07□□□□□ -2.08
HMGB1P25-201ENST00000468402 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
HMGB1P25-201ENST00000468402 VSTM2AQ8TAG5 236 aa2.07□□□□□ -2.08
HMGB1P25-201ENST00000468402 DEFB104AQ8WTQ1 72 aa2.07□□□□□ -2.08
HMGB1P25-201ENST00000468402 VAMP8Q9BV40 100 aa2.07□□□□□ -2.08
HMGB1P25-201ENST00000468402 FLNAP21333 2647 aaKnown RBP2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 ITPR2Q14571 2701 aa2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 DOPEY1Q5JWR5 2465 aa2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 IGKV2-40A0A087WW87 121 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 TRAV1-1A0A0B4J248 108 aa2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 TCRBV4S1A1TA0A5B7 111 aa2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 K7EIM0 57 aa2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 M0R1W7 72 aa2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 ERC2-IT1O76042 136 aa2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 IGKV1-17P01599 117 aa2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 IGKV2D-40P01614 121 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 UBE2L3P68036 154 aaKnown RBP2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 741 ms