RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 GYPAP02724 150 aa0.31□□□□□ -2.36
SMC4-208ENST00000467468 HMGN3Q15651 99 aa0.31□□□□□ -2.36
SMC4-208ENST00000467468 DEFB107AQ8IZN7 70 aa0.31□□□□□ -2.36
SMC4-208ENST00000467468 EPRSP07814 1512 aaKnown RBP0.31□□□□□ -2.36
SMC4-208ENST00000467468 OTOGQ6ZRI0 2925 aa0.31□□□□□ -2.36
SMC4-208ENST00000467468 F8P00451 2351 aa0.3□□□□□ -2.36
SMC4-208ENST00000467468 A0A1B0GU69 56 aa0.3□□□□□ -2.36
SMC4-208ENST00000467468 C6orf201Q7Z4U5 140 aa0.3□□□□□ -2.36
SMC4-208ENST00000467468 K7EQZ3 153 aa0.29□□□□□ -2.36
SMC4-208ENST00000467468 ETDBQ3ZM63 59 aa0.29□□□□□ -2.36
SMC4-208ENST00000467468 ZNF720Q7Z2F6 126 aa0.29□□□□□ -2.36
SMC4-208ENST00000467468 KNDC1Q76NI1 1749 aa0.29□□□□□ -2.36
SMC4-208ENST00000467468 FANCAO15360 1455 aa0.29□□□□□ -2.36
SMC4-208ENST00000467468 NAV2Q8IVL1 2488 aa0.28□□□□□ -2.36
SMC4-208ENST00000467468 CLTCQ00610 1675 aaKnown RBP0.28□□□□□ -2.36
SMC4-208ENST00000467468 AHCTF1Q8WYP5 2266 aa0.28□□□□□ -2.36
SMC4-208ENST00000467468 SPRR1BP22528 89 aa0.28□□□□□ -2.36
SMC4-208ENST00000467468 ALKAL2Q6UX46 152 aa0.28□□□□□ -2.36
SMC4-208ENST00000467468 PSENENQ9NZ42 101 aa0.28□□□□□ -2.36
SMC4-208ENST00000467468 TARBP1Q13395 1621 aaKnown RBP0.27□□□□□ -2.37
SMC4-208ENST00000467468 SHPRHQ149N8 1683 aa0.27□□□□□ -2.37
SMC4-208ENST00000467468 F8WEM9 126 aa0.27□□□□□ -2.37
SMC4-208ENST00000467468 GNGT1P63211 74 aa0.27□□□□□ -2.37
SMC4-208ENST00000467468 USMG5Q96IX5 58 aa0.27□□□□□ -2.37
SMC4-208ENST00000467468 C20orf78Q9BR46 151 aa0.27□□□□□ -2.37
SMC4-208ENST00000467468 Q9H521 79 aa0.27□□□□□ -2.37
SMC4-208ENST00000467468 HIGD1BQ9P298 99 aa0.27□□□□□ -2.37
SMC4-208ENST00000467468 ATP10BO94823 1461 aa0.27□□□□□ -2.37
SMC4-208ENST00000467468 IQSEC2Q5JU85 1478 aa0.27□□□□□ -2.37
SMC4-208ENST00000467468 MAST4O15021 2626 aa0.27□□□□□ -2.37
SMC4-208ENST00000467468 TTC37Q6PGP7 1564 aa0.27□□□□□ -2.37
SMC4-208ENST00000467468 PAPPA2Q9BXP8 1791 aa0.27□□□□□ -2.37
SMC4-208ENST00000467468 SPTBN2O15020 2390 aa0.26□□□□□ -2.37
SMC4-208ENST00000467468 V9GYS6 101 aa0.26□□□□□ -2.37
SMC4-208ENST00000467468 EDC4Q6P2E9 1401 aaKnown RBP0.26□□□□□ -2.37
SMC4-208ENST00000467468 KIAA0556O60303 1618 aa0.26□□□□□ -2.37
SMC4-208ENST00000467468 C2CD3Q4AC94 2353 aa0.26□□□□□ -2.37
SMC4-208ENST00000467468 CSMD3Q7Z407 3707 aa0.25□□□□□ -2.37
SMC4-208ENST00000467468 ZFYVE26Q68DK2 2539 aa0.25□□□□□ -2.37
SMC4-208ENST00000467468 BAZ1AQ9NRL2 1556 aaPredicted RBP0.24□□□□□ -2.37
SMC4-208ENST00000467468 D6R8Y8 96 aa0.24□□□□□ -2.37
SMC4-208ENST00000467468 LEPROTL1O95214 131 aa0.24□□□□□ -2.37
SMC4-208ENST00000467468 MUSTN1Q8IVN3 82 aa0.24□□□□□ -2.37
SMC4-208ENST00000467468 ZNF292O60281 2723 aa0.24□□□□□ -2.37
SMC4-208ENST00000467468 CUX1P39880 1505 aa0.23□□□□□ -2.37
SMC4-208ENST00000467468 CCDC141Q6ZP82 1450 aa0.22□□□□□ -2.37
SMC4-208ENST00000467468 SYNE2Q8WXH0 6885 aaKnown RBP0.22□□□□□ -2.37
SMC4-208ENST00000467468 USF3Q68DE3 2245 aa0.22□□□□□ -2.37
SMC4-208ENST00000467468 COX8AP10176 69 aa0.22□□□□□ -2.37
SMC4-208ENST00000467468 PYY3Q5JQD4 70 aa0.22□□□□□ -2.37
SMC4-208ENST00000467468 SLIT1O75093 1534 aa0.22□□□□□ -2.37
SMC4-208ENST00000467468 CEP162Q5TB80 1403 aa0.21□□□□□ -2.38
SMC4-208ENST00000467468 MON2Q7Z3U7 1717 aa0.21□□□□□ -2.38
SMC4-208ENST00000467468 PTPRZ1P23471 2315 aaPredicted RBP0.21□□□□□ -2.38
SMC4-208ENST00000467468 PLCE1Q9P212 2302 aa0.21□□□□□ -2.38
SMC4-208ENST00000467468 SAMD9Q5K651 1589 aa0.21□□□□□ -2.38
SMC4-208ENST00000467468 SMIM11AP58511 58 aa0.21□□□□□ -2.38
SMC4-208ENST00000467468 IGF2RP11717 2491 aa0.2□□□□□ -2.38
SMC4-208ENST00000467468 FSIP2Q5CZC0 6907 aa0.2□□□□□ -2.38
SMC4-208ENST00000467468 GOLGA4Q13439 2230 aaKnown RBP0.2□□□□□ -2.38
SMC4-208ENST00000467468 UNC79Q9P2D8 2635 aa0.2□□□□□ -2.38
SMC4-208ENST00000467468 C5P01031 1676 aa0.2□□□□□ -2.38
SMC4-208ENST00000467468 TSC2P49815 1807 aa0.2□□□□□ -2.38
SMC4-208ENST00000467468 HRNRQ86YZ3 2850 aaPredicted RBP0.2□□□□□ -2.38
SMC4-208ENST00000467468 HMGN2P05204 90 aaKnown RBP0.19□□□□□ -2.38
SMC4-208ENST00000467468 PEA15Q15121 130 aa0.19□□□□□ -2.38
SMC4-208ENST00000467468 CRIPTQ9P021 101 aa0.19□□□□□ -2.38
SMC4-208ENST00000467468 UBE2D4Q9Y2X8 147 aa0.19□□□□□ -2.38
SMC4-208ENST00000467468 SMARCA2P51531 1590 aa0.19□□□□□ -2.38
SMC4-208ENST00000467468 LRRC37AA6NMS7 1700 aa0.18□□□□□ -2.38
SMC4-208ENST00000467468 PVALEFA0A1B0GWK0 134 aa0.18□□□□□ -2.38
SMC4-208ENST00000467468 IGLC2P0DOY2 106 aa0.18□□□□□ -2.38
SMC4-208ENST00000467468 IGLC3P0DOY3 106 aa0.18□□□□□ -2.38
SMC4-208ENST00000467468 HUWE1Q7Z6Z7 4374 aaKnown RBP0.17□□□□□ -2.38
SMC4-208ENST00000467468 MYO3AQ8NEV4 1616 aa0.17□□□□□ -2.38
SMC4-208ENST00000467468 K7EP34 96 aa0.17□□□□□ -2.38
SMC4-208ENST00000467468 SPINK4O60575 86 aa0.17□□□□□ -2.38
SMC4-208ENST00000467468 ABCC3O15438 1527 aa0.17□□□□□ -2.38
SMC4-208ENST00000467468 NCOR2Q9Y618 2525 aa0.17□□□□□ -2.38
SMC4-208ENST00000467468 PIEZO2Q9H5I5 2752 aa0.17□□□□□ -2.38
SMC4-208ENST00000467468 NKTRP30414 1462 aaKnown RBP0.16□□□□□ -2.38
SMC4-208ENST00000467468 CRYBG1Q9Y4K1 1723 aa0.16□□□□□ -2.38
SMC4-208ENST00000467468 GNG2P59768 71 aa0.16□□□□□ -2.38
SMC4-208ENST00000467468 DEFB105AQ8NG35 78 aa0.16□□□□□ -2.38
SMC4-208ENST00000467468 PLIN4Q96Q06 1357 aa0.16□□□□□ -2.38
SMC4-208ENST00000467468 TENM4Q6N022 2769 aa0.16□□□□□ -2.38
SMC4-208ENST00000467468 KIAA1551Q9HCM1 1747 aa0.16□□□□□ -2.38
SMC4-208ENST00000467468 FMN2Q9NZ56 1722 aa0.16□□□□□ -2.38
SMC4-208ENST00000467468 DNAJC13O75165 2243 aa0.15□□□□□ -2.38
SMC4-208ENST00000467468 CPSF4LA6NMK7 179 aaKnown RBP0.15□□□□□ -2.39
SMC4-208ENST00000467468 I3L3M4 83 aa0.15□□□□□ -2.39
SMC4-208ENST00000467468 NMSQ5H8A3 153 aa0.15□□□□□ -2.39
SMC4-208ENST00000467468 C9orf62Q8N4C0 152 aa0.15□□□□□ -2.39
SMC4-208ENST00000467468 MYCBP2O75592 4640 aa0.14□□□□□ -2.39
SMC4-208ENST00000467468 PTPRQQ9UMZ3 2332 aa0.14□□□□□ -2.39
SMC4-208ENST00000467468 NEXMIFQ5QGS0 1516 aa0.14□□□□□ -2.39
SMC4-208ENST00000467468 ANKRD17O75179 2603 aaKnown RBP0.14□□□□□ -2.39
SMC4-208ENST00000467468 S100A16Q96FQ6 103 aaKnown RBP0.14□□□□□ -2.39
SMC4-208ENST00000467468 MYH4Q9Y623 1939 aa0.14□□□□□ -2.39
SMC4-208ENST00000467468 PKDREJQ9NTG1 2253 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 311.3 ms