RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 SNRPGP62308 76 aaKnown RBP1.75□□□□□ -2.13
VPS50-209ENST00000467326 NREPQ16612 68 aa1.75□□□□□ -2.13
VPS50-209ENST00000467326 WFDC9Q8NEX5 89 aa1.75□□□□□ -2.13
VPS50-209ENST00000467326 TMEM263Q8WUH6 116 aaKnown RBP1.75□□□□□ -2.13
VPS50-209ENST00000467326 LINC00208Q96KT6 92 aa1.75□□□□□ -2.13
VPS50-209ENST00000467326 PAPPAQ13219 1627 aa1.75□□□□□ -2.13
VPS50-209ENST00000467326 EIF2AK4Q9P2K8 1649 aaKnown RBP1.75□□□□□ -2.13
VPS50-209ENST00000467326 SAMD9Q5K651 1589 aa1.75□□□□□ -2.13
VPS50-209ENST00000467326 CEP170BQ9Y4F5 1589 aaPredicted RBP1.75□□□□□ -2.13
VPS50-209ENST00000467326 SIPA1L3O60292 1781 aaPredicted RBP1.75□□□□□ -2.13
VPS50-209ENST00000467326 NINQ8N4C6 2090 aa1.75□□□□□ -2.13
VPS50-209ENST00000467326 CASP8AP2Q9UKL3 1982 aa1.74□□□□□ -2.13
VPS50-209ENST00000467326 ABCA5Q8WWZ7 1642 aa1.74□□□□□ -2.13
VPS50-209ENST00000467326 CICQ96RK0 1608 aaPredicted RBP1.74□□□□□ -2.13
VPS50-209ENST00000467326 BRD3OSQ6XYD6 125 aa1.74□□□□□ -2.13
VPS50-209ENST00000467326 BTAF1O14981 1849 aa1.74□□□□□ -2.13
VPS50-209ENST00000467326 MYOFQ9NZM1 2061 aa1.74□□□□□ -2.13
VPS50-209ENST00000467326 COL5A3P25940 1745 aaPredicted RBP1.74□□□□□ -2.13
VPS50-209ENST00000467326 SPAG17Q6Q759 2223 aa1.74□□□□□ -2.13
VPS50-209ENST00000467326 PDCD11Q14690 1871 aaKnown RBP1.73□□□□□ -2.13
VPS50-209ENST00000467326 HEATR1Q9H583 2144 aaKnown RBP1.73□□□□□ -2.13
VPS50-209ENST00000467326 ERCC6L2Q5T890 1561 aa1.73□□□□□ -2.13
VPS50-209ENST00000467326 A0A087WTM6 91 aa1.73□□□□□ -2.13
VPS50-209ENST00000467326 A0A087WVE0 104 aa1.73□□□□□ -2.13
VPS50-209ENST00000467326 TRBV6-1A0A0K0K1D8 114 aa1.73□□□□□ -2.13
VPS50-209ENST00000467326 SMIM27A0A1W2PRY6 76 aa1.73□□□□□ -2.13
VPS50-209ENST00000467326 K7EMI3 77 aa1.73□□□□□ -2.13
VPS50-209ENST00000467326 FDCSPQ8NFU4 85 aa1.73□□□□□ -2.13
VPS50-209ENST00000467326 CEP192Q8TEP8 1941 aa1.73□□□□□ -2.13
VPS50-209ENST00000467326 NUMA1Q14980 2115 aa1.73□□□□□ -2.13
VPS50-209ENST00000467326 LOC285556D6RIA3 1793 aa1.72□□□□□ -2.13
VPS50-209ENST00000467326 ZGRF1Q86YA3 2104 aa1.72□□□□□ -2.13
VPS50-209ENST00000467326 TRAV21A0A0B4J279 112 aa1.72□□□□□ -2.13
VPS50-209ENST00000467326 C10orf142B7Z368 130 aa1.72□□□□□ -2.13
VPS50-209ENST00000467326 ACYP2P14621 99 aa1.72□□□□□ -2.13
VPS50-209ENST00000467326 ZNF137PP52743 207 aa1.72□□□□□ -2.13
VPS50-209ENST00000467326 KRTAP12-3P60328 96 aa1.72□□□□□ -2.13
VPS50-209ENST00000467326 RPL38P63173 70 aaKnown RBP1.72□□□□□ -2.13
VPS50-209ENST00000467326 GAFA1Q96PS6 74 aa1.72□□□□□ -2.13
VPS50-209ENST00000467326 CCL19Q99731 98 aa1.72□□□□□ -2.13
VPS50-209ENST00000467326 KIAA0100Q14667 2235 aaKnown RBP1.72□□□□□ -2.13
VPS50-209ENST00000467326 MED13Q9UHV7 2174 aa1.72□□□□□ -2.13
VPS50-209ENST00000467326 EXPH5Q8NEV8 1989 aa1.72□□□□□ -2.13
VPS50-209ENST00000467326 SHROOM3Q8TF72 1996 aa1.72□□□□□ -2.13
VPS50-209ENST00000467326 UBR1Q8IWV7 1749 aa1.71□□□□□ -2.13
VPS50-209ENST00000467326 ATP7AQ04656 1500 aa1.71□□□□□ -2.14
VPS50-209ENST00000467326 SHANK1Q9Y566 2161 aa1.71□□□□□ -2.14
VPS50-209ENST00000467326 ALKQ9UM73 1620 aa1.71□□□□□ -2.14
VPS50-209ENST00000467326 SPATA8Q6RVD6 105 aa1.71□□□□□ -2.14
VPS50-209ENST00000467326 ENHOQ6UWT2 76 aa1.71□□□□□ -2.14
VPS50-209ENST00000467326 MPDZO75970 2070 aa1.71□□□□□ -2.14
VPS50-209ENST00000467326 ABCC8Q09428 1581 aa1.71□□□□□ -2.14
VPS50-209ENST00000467326 TRGV1A0A0A0MS02 117 aa1.7□□□□□ -2.14
VPS50-209ENST00000467326 POLR1AO95602 1720 aaPredicted RBP1.7□□□□□ -2.14
VPS50-209ENST00000467326 DEFB112Q30KQ8 113 aa1.7□□□□□ -2.14
VPS50-209ENST00000467326 NUP188Q5SRE5 1749 aa1.7□□□□□ -2.14
VPS50-209ENST00000467326 UNQ6190/PRO20217Q6UXQ8 127 aa1.7□□□□□ -2.14
VPS50-209ENST00000467326 OBSCN-AS1Q96MR7 158 aa1.7□□□□□ -2.14
VPS50-209ENST00000467326 SPRR4Q96PI1 79 aa1.7□□□□□ -2.14
VPS50-209ENST00000467326 BAZ2BQ9UIF8 2168 aaKnown RBP1.7□□□□□ -2.14
VPS50-209ENST00000467326 UNC13CQ8NB66 2214 aa1.7□□□□□ -2.14
VPS50-209ENST00000467326 NHSL1Q5SYE7 1610 aa1.69□□□□□ -2.14
VPS50-209ENST00000467326 LCE6AA0A183 80 aa1.69□□□□□ -2.14
VPS50-209ENST00000467326 C10orf99Q6UWK7 81 aa1.69□□□□□ -2.14
VPS50-209ENST00000467326 Q96NJ1 140 aa1.69□□□□□ -2.14
VPS50-209ENST00000467326 PLAC8Q9NZF1 115 aa1.69□□□□□ -2.14
VPS50-209ENST00000467326 C3P01024 1663 aa1.69□□□□□ -2.14
VPS50-209ENST00000467326 CR1P17927 2039 aa1.69□□□□□ -2.14
VPS50-209ENST00000467326 LRP6O75581 1613 aa1.69□□□□□ -2.14
VPS50-209ENST00000467326 ALPK2Q86TB3 2170 aa1.68□□□□□ -2.14
VPS50-209ENST00000467326 SHPRHQ149N8 1683 aa1.68□□□□□ -2.14
VPS50-209ENST00000467326 FAM208AQ9UK61 1670 aaKnown RBP1.68□□□□□ -2.14
VPS50-209ENST00000467326 H0YGX0 51 aa1.68□□□□□ -2.14
VPS50-209ENST00000467326 NCR3O14931 201 aa1.68□□□□□ -2.14
VPS50-209ENST00000467326 MRPL33O75394 65 aaKnown RBP1.68□□□□□ -2.14
VPS50-209ENST00000467326 KRTAP12-4P60329 112 aa1.68□□□□□ -2.14
VPS50-209ENST00000467326 DEFB114Q30KQ6 69 aa1.68□□□□□ -2.14
VPS50-209ENST00000467326 DLG5Q8TDM6 1919 aa1.68□□□□□ -2.14
VPS50-209ENST00000467326 SCN7AQ01118 1682 aa1.67□□□□□ -2.14
VPS50-209ENST00000467326 PI4KAP42356 2102 aa1.67□□□□□ -2.14
VPS50-209ENST00000467326 GBF1Q92538 1859 aa1.67□□□□□ -2.14
VPS50-209ENST00000467326 PHRF1Q9P1Y6 1649 aaKnown RBP1.67□□□□□ -2.14
VPS50-209ENST00000467326 ARFGEF3Q5TH69 2177 aa1.67□□□□□ -2.14
VPS50-209ENST00000467326 TJP1Q07157 1748 aa1.67□□□□□ -2.14
VPS50-209ENST00000467326 PKD1L3Q7Z443 1732 aa1.67□□□□□ -2.14
VPS50-209ENST00000467326 LINC01546A6NGU7 62 aa1.67□□□□□ -2.14
VPS50-209ENST00000467326 SPINK13Q1W4C9 94 aa1.67□□□□□ -2.14
VPS50-209ENST00000467326 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.67□□□□□ -2.14
VPS50-209ENST00000467326 LINC00575Q6W349 94 aa1.67□□□□□ -2.14
VPS50-209ENST00000467326 LAMA4Q16363 1823 aa1.67□□□□□ -2.14
VPS50-209ENST00000467326 RTTNQ86VV8 2226 aa1.67□□□□□ -2.14
VPS50-209ENST00000467326 A0A1B0GU69 56 aa1.66□□□□□ -2.14
VPS50-209ENST00000467326 NDUFA4O00483 81 aa1.66□□□□□ -2.14
VPS50-209ENST00000467326 FXYD6P3P58550 94 aa1.66□□□□□ -2.14
VPS50-209ENST00000467326 DEFB103AP81534 67 aa1.66□□□□□ -2.14
VPS50-209ENST00000467326 SMIM11BQ8TCY0 68 aa1.66□□□□□ -2.14
VPS50-209ENST00000467326 ANKRD36CQ5JPF3 1778 aa1.66□□□□□ -2.14
VPS50-209ENST00000467326 DOCK11Q5JSL3 2073 aa1.66□□□□□ -2.14
VPS50-209ENST00000467326 COL5A1P20908 1838 aaPredicted RBP1.66□□□□□ -2.14
VPS50-209ENST00000467326 TSC2P49815 1807 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms