RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 CHCHD7Q9BUK0 85 aa3.41□□□□□ -1.86
PTCD3-207ENST00000467273 OCR1Q9BZK8 76 aa3.41□□□□□ -1.86
PTCD3-207ENST00000467273 IGKV2D-24A0A075B6R9 120 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 TRAV13-1A0A0B4J241 112 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 A8MWV9 139 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 M0R2P5 195 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 M0R378 163 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 PITX3O75364 302 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 CST7O76096 145 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 LGALS3P17931 250 aaKnown RBP3.4□□□□□ -1.87
PTCD3-207ENST00000467273 NMUP48645 174 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 AQP4P55087 323 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 COA6Q5JTJ3 125 aaKnown RBP3.4□□□□□ -1.87
PTCD3-207ENST00000467273 Q6AWC8 147 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 IZUMO2Q6UXV1 221 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 PATE2Q6UY27 113 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 KRTAP7-1Q8IUC3 87 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 ATOH7Q8N100 152 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 HIST3H2BBQ8N257 126 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 KCNRGQ8N5I3 272 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 ZFAND2AQ8N6M9 145 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 SLC25A29Q8N8R3 303 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 OR5C1Q8NGR4 320 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 C7orf33Q8WU49 177 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 RAB2BQ8WUD1 216 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 HYLS1Q96M11 299 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 SLC25A2Q9BXI2 301 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 AGPAT4-IT1Q9H0P7 198 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 NPVFQ9HCQ7 196 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 SMCO4Q9NRQ5 59 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 TP73-AS1Q9UF72 201 aa3.4□□□□□ -1.87
PTCD3-207ENST00000467273 LPAP08519 4548 aa3.39□□□□□ -1.87
PTCD3-207ENST00000467273 RPL37AP8A6NKH3 93 aa3.39□□□□□ -1.87
PTCD3-207ENST00000467273 H3BMG7 143 aa3.39□□□□□ -1.87
PTCD3-207ENST00000467273 PANO1I0J062 215 aa3.39□□□□□ -1.87
PTCD3-207ENST00000467273 SYNGR2O43760 224 aa3.39□□□□□ -1.87
PTCD3-207ENST00000467273 LTAP01374 205 aa3.39□□□□□ -1.87
PTCD3-207ENST00000467273 MT-ND6P03923 174 aa3.39□□□□□ -1.87
PTCD3-207ENST00000467273 PYYP10082 97 aa3.39□□□□□ -1.87
PTCD3-207ENST00000467273 MGST1P10620 155 aaKnown RBP3.39□□□□□ -1.87
PTCD3-207ENST00000467273 ZNF80P51504 273 aaPredicted RBP3.39□□□□□ -1.87
PTCD3-207ENST00000467273 SSBP1Q04837 148 aaKnown RBP3.39□□□□□ -1.87
PTCD3-207ENST00000467273 PDE6HQ13956 83 aa3.39□□□□□ -1.87
PTCD3-207ENST00000467273 KHDC3LQ587J8 217 aa3.39□□□□□ -1.87
PTCD3-207ENST00000467273 SPINK6Q6UWN8 80 aa3.39□□□□□ -1.87
PTCD3-207ENST00000467273 DPPA3Q6W0C5 159 aa3.39□□□□□ -1.87
PTCD3-207ENST00000467273 SDIM1Q6ZPB5 146 aa3.39□□□□□ -1.87
PTCD3-207ENST00000467273 Q6ZUT4 128 aa3.39□□□□□ -1.87
PTCD3-207ENST00000467273 LYZL2Q7Z4W2 148 aa3.39□□□□□ -1.87
PTCD3-207ENST00000467273 TMEM252Q8N6L7 170 aa3.39□□□□□ -1.87
PTCD3-207ENST00000467273 SLC39A9Q9NUM3 307 aa3.39□□□□□ -1.87
PTCD3-207ENST00000467273 ZNF492Q9P255 531 aa3.39□□□□□ -1.87
PTCD3-207ENST00000467273 LENEPQ9Y5L5 61 aa3.39□□□□□ -1.87
PTCD3-207ENST00000467273 IGHV3-16A0A0C4DH30 117 aa3.38□□□□□ -1.87
PTCD3-207ENST00000467273 TMEM262E9PQX1 116 aa3.38□□□□□ -1.87
PTCD3-207ENST00000467273 H3BQ15 152 aa3.38□□□□□ -1.87
PTCD3-207ENST00000467273 UQCRQO14949 82 aa3.38□□□□□ -1.87
PTCD3-207ENST00000467273 TCRAP04437 139 aa3.38□□□□□ -1.87
PTCD3-207ENST00000467273 SRP19P09132 144 aaKnown RBP3.38□□□□□ -1.87
PTCD3-207ENST00000467273 IAPPP10997 89 aa3.38□□□□□ -1.87
PTCD3-207ENST00000467273 HERVK_113P61574 105 aa3.38□□□□□ -1.87
PTCD3-207ENST00000467273 SPANXN5Q5MJ07 72 aa3.38□□□□□ -1.87
PTCD3-207ENST00000467273 C10orf91Q5T1B1 145 aa3.38□□□□□ -1.87
PTCD3-207ENST00000467273 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
PTCD3-207ENST00000467273 ALKAL2Q6UX46 152 aa3.38□□□□□ -1.87
PTCD3-207ENST00000467273 Q8N377 158 aa3.38□□□□□ -1.87
PTCD3-207ENST00000467273 LINC00526Q96FQ7 95 aa3.38□□□□□ -1.87
PTCD3-207ENST00000467273 PLAC8Q9NZF1 115 aa3.38□□□□□ -1.87
PTCD3-207ENST00000467273 CRCT1Q9UGL9 99 aa3.38□□□□□ -1.87
PTCD3-207ENST00000467273 KIF25-AS1Q9Y6Z4 181 aa3.38□□□□□ -1.87
PTCD3-207ENST00000467273 M0R3E3 92 aa3.37□□□□□ -1.87
PTCD3-207ENST00000467273 PEX7O00628 323 aa3.37□□□□□ -1.87
PTCD3-207ENST00000467273 PLA2G10O15496 165 aa3.37□□□□□ -1.87
PTCD3-207ENST00000467273 CHTF8P0CG12 524 aa3.37□□□□□ -1.87
PTCD3-207ENST00000467273 CNBPP62633 177 aaKnown RBP3.37□□□□□ -1.87
PTCD3-207ENST00000467273 ORMDL2Q53FV1 153 aa3.37□□□□□ -1.87
PTCD3-207ENST00000467273 PRR9Q5T870 116 aa3.37□□□□□ -1.87
PTCD3-207ENST00000467273 C9orf153Q5TBE3 101 aa3.37□□□□□ -1.87
PTCD3-207ENST00000467273 C10orf113Q5VZT2 155 aa3.37□□□□□ -1.87
PTCD3-207ENST00000467273 TMEM183AQ8IXX5 376 aa3.37□□□□□ -1.87
PTCD3-207ENST00000467273 CYB561D1Q8N8Q1 229 aa3.37□□□□□ -1.87
PTCD3-207ENST00000467273 SPACA4Q8TDM5 124 aa3.37□□□□□ -1.87
PTCD3-207ENST00000467273 FAM104AQ969W3 186 aa3.37□□□□□ -1.87
PTCD3-207ENST00000467273 UBE2WQ96B02 151 aa3.37□□□□□ -1.87
PTCD3-207ENST00000467273 SEC11CQ9BY50 192 aa3.37□□□□□ -1.87
PTCD3-207ENST00000467273 TMEM14CQ9P0S9 112 aa3.37□□□□□ -1.87
PTCD3-207ENST00000467273 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-207ENST00000467273 TRBV27A0A0K0K1C4 114 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 RBAKDNA6NC62 111 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 KRTAP16-1A8MUX0 517 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 NDUFC2-KCTD14E9PQ53 114 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 TMEM256-PLSCR3K7ERE1 68 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 CXCL1P09341 107 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 CRYGAP11844 174 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 HIST1H2BOP23527 126 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 HIST1H2BBP33778 126 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 CXCL5P42830 114 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 HIST1H2BDP58876 126 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 HIST1H2BCP62807 126 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 PRR4Q16378 134 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms