RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 IGSF23A1L1A6 192 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 FABP5P3A8MUU1 101 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 C17orf112F2Z3M2 114 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 M0R036 132 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 HMGB3O15347 200 aaKnown RBP1.37□□□□□ -2.19
XRN1-206ENST00000467077 TCRAP04437 139 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 BCL2P10415 239 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 TAS2R45P59539 299 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 VAMP3Q15836 100 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 IQCJQ1A5X6 159 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 SAPCD1Q5SSQ6 148 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 ZFP82Q8N141 532 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 LINC00526Q96FQ7 95 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 FMC1Q96HJ9 113 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 YPEL4Q96NS1 127 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 AQP10Q96PS8 301 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 RETNLBQ9BQ08 111 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 MRPS26Q9BYN8 205 aaKnown RBP1.37□□□□□ -2.19
XRN1-206ENST00000467077 KCNIP2Q9NS61 270 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 TRAPPC1Q9Y5R8 145 aa1.37□□□□□ -2.19
XRN1-206ENST00000467077 SYNE2Q8WXH0 6885 aaKnown RBP1.37□□□□□ -2.19
XRN1-206ENST00000467077 IGHV1-58A0A0C4DH39 117 aa1.36□□□□□ -2.19
XRN1-206ENST00000467077 LOC107984640A0A0U1RRK4 108 aa1.36□□□□□ -2.19
XRN1-206ENST00000467077 MUC21A0A140T8X8 626 aa1.36□□□□□ -2.19
XRN1-206ENST00000467077 A0A1B0GXF2 115 aa1.36□□□□□ -2.19
XRN1-206ENST00000467077 NDUFB6O95139 128 aa1.36□□□□□ -2.19
XRN1-206ENST00000467077 SMIM17P0DL12 118 aa1.36□□□□□ -2.19
XRN1-206ENST00000467077 FGF6P10767 208 aa1.36□□□□□ -2.19
XRN1-206ENST00000467077 RPL12P30050 165 aaKnown RBP1.36□□□□□ -2.19
XRN1-206ENST00000467077 XCL1P47992 114 aa1.36□□□□□ -2.19
XRN1-206ENST00000467077 TMBIM6P55061 237 aa1.36□□□□□ -2.19
XRN1-206ENST00000467077 DEFA3P59666 94 aa1.36□□□□□ -2.19
XRN1-206ENST00000467077 TPRXLQ17RH7 258 aa1.36□□□□□ -2.19
XRN1-206ENST00000467077 KRTAP25-1Q3LHN0 102 aa1.36□□□□□ -2.19
XRN1-206ENST00000467077 KRTAP13-4Q3LI77 160 aa1.36□□□□□ -2.19
XRN1-206ENST00000467077 C9orf116Q5BN46 136 aaPredicted RBP1.36□□□□□ -2.19
XRN1-206ENST00000467077 EIF5AL1Q6IS14 154 aaKnown RBP1.36□□□□□ -2.19
XRN1-206ENST00000467077 C5orf17Q8NAS9 161 aa1.36□□□□□ -2.19
XRN1-206ENST00000467077 OR5C1Q8NGR4 320 aa1.36□□□□□ -2.19
XRN1-206ENST00000467077 SCGB1C1Q8TD33 95 aa1.36□□□□□ -2.19
XRN1-206ENST00000467077 ZNF471Q9BX82 626 aaPredicted RBP1.36□□□□□ -2.19
XRN1-206ENST00000467077 WDR61Q9GZS3 305 aaKnown RBP1.36□□□□□ -2.19
XRN1-206ENST00000467077 C11orf1Q9H5F2 150 aa1.36□□□□□ -2.19
XRN1-206ENST00000467077 A0A0B4J2C4 111 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 RAB19A4D1S5 217 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 A8MWP4 228 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 K7ERS5 55 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 CCL25O15444 150 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 SH2D1AO60880 128 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 APOMO95445 188 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 ATP6V1G2O95670 118 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 MGPP08493 103 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 ARL14EPLP0DKL9 152 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 NKX2-5P52952 324 aaPredicted RBP1.35□□□□□ -2.19
XRN1-206ENST00000467077 UBE2BP63146 152 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 SPCS2Q15005 226 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 FAM162BQ5T6X4 162 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 SPANXN1Q5VSR9 72 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 FAM19A5Q7Z5A7 132 aaPredicted RBP1.35□□□□□ -2.19
XRN1-206ENST00000467077 OR5A1Q8NGJ0 315 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 OR10AG1Q8NH19 301 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 TSKUQ8WUA8 353 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 ANAPC13Q9BS18 74 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 EPDR1Q9UM22 224 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 ARL2-SNX15V9GYD0 113 aa1.35□□□□□ -2.19
XRN1-206ENST00000467077 A0A1B0GW15 77 aa1.34□□□□□ -2.19
XRN1-206ENST00000467077 NAP1L6A6NFF2 107 aa1.34□□□□□ -2.19
XRN1-206ENST00000467077 M0QY20 66 aa1.34□□□□□ -2.19
XRN1-206ENST00000467077 SCGB1C2P0DMR2 95 aa1.34□□□□□ -2.19
XRN1-206ENST00000467077 GCHFRP30047 84 aa1.34□□□□□ -2.19
XRN1-206ENST00000467077 CDC34P49427 236 aaPredicted RBP1.34□□□□□ -2.19
XRN1-206ENST00000467077 CRIP1P50238 77 aa1.34□□□□□ -2.19
XRN1-206ENST00000467077 COTL1Q14019 142 aa1.34□□□□□ -2.19
XRN1-206ENST00000467077 SS18Q15532 418 aa1.34□□□□□ -2.19
XRN1-206ENST00000467077 Q86TA4 180 aa1.34□□□□□ -2.19
XRN1-206ENST00000467077 C3orf22Q8N5N4 141 aa1.34□□□□□ -2.19
XRN1-206ENST00000467077 NUP35Q8NFH5 326 aa1.34□□□□□ -2.19
XRN1-206ENST00000467077 SMIM3Q9BZL3 60 aa1.34□□□□□ -2.19
XRN1-206ENST00000467077 V9GYH0 126 aa1.34□□□□□ -2.19
XRN1-206ENST00000467077 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.33□□□□□ -2.2
XRN1-206ENST00000467077 LINC00959A0A1B0GUT2 108 aa1.33□□□□□ -2.2
XRN1-206ENST00000467077 IGKV2-29A2NJV5 120 aaPredicted RBP1.33□□□□□ -2.2
XRN1-206ENST00000467077 C19orf71A6NCJ1 209 aa1.33□□□□□ -2.2
XRN1-206ENST00000467077 M0QXV9 152 aa1.33□□□□□ -2.2
XRN1-206ENST00000467077 M0R2T5 61 aa1.33□□□□□ -2.2
XRN1-206ENST00000467077 COX7A2LO14548 114 aa1.33□□□□□ -2.2
XRN1-206ENST00000467077 S100A9P06702 114 aaKnown RBP1.33□□□□□ -2.2
XRN1-206ENST00000467077 S100A5P33763 92 aa1.33□□□□□ -2.2
XRN1-206ENST00000467077 UBE2G2P60604 165 aa1.33□□□□□ -2.2
XRN1-206ENST00000467077 UBE2G1P62253 170 aa1.33□□□□□ -2.2
XRN1-206ENST00000467077 MT1HP80294 61 aa1.33□□□□□ -2.2
XRN1-206ENST00000467077 ASB16-AS1Q495Z4 193 aa1.33□□□□□ -2.2
XRN1-206ENST00000467077 TRIQKQ629K1 86 aa1.33□□□□□ -2.2
XRN1-206ENST00000467077 RASL11AQ6T310 242 aa1.33□□□□□ -2.2
XRN1-206ENST00000467077 BTF3L4Q96K17 158 aa1.33□□□□□ -2.2
XRN1-206ENST00000467077 AP1S3Q96PC3 154 aa1.33□□□□□ -2.2
XRN1-206ENST00000467077 NIT2Q9NQR4 276 aa1.33□□□□□ -2.2
XRN1-206ENST00000467077 TMEM167BQ9NRX6 74 aa1.33□□□□□ -2.2
XRN1-206ENST00000467077 ZFP30Q9Y2G7 519 aa1.33□□□□□ -2.2
XRN1-206ENST00000467077 MACF1Q9UPN3 7388 aaKnown RBP1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms