RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 ATP10BO94823 1461 aa0.27□□□□□ -2.37
GTF3C3-209ENST00000466862 ABCC2Q92887 1545 aa0.27□□□□□ -2.37
GTF3C3-209ENST00000466862 POLQO75417 2590 aa0.27□□□□□ -2.37
GTF3C3-209ENST00000466862 BDP1A6H8Y1 2624 aa0.27□□□□□ -2.37
GTF3C3-209ENST00000466862 TARBP1Q13395 1621 aaKnown RBP0.27□□□□□ -2.37
GTF3C3-209ENST00000466862 NHSL1Q5SYE7 1610 aa0.27□□□□□ -2.37
GTF3C3-209ENST00000466862 MYO3AQ8NEV4 1616 aa0.27□□□□□ -2.37
GTF3C3-209ENST00000466862 KIAA1551Q9HCM1 1747 aa0.27□□□□□ -2.37
GTF3C3-209ENST00000466862 PAPPA2Q9BXP8 1791 aa0.27□□□□□ -2.37
GTF3C3-209ENST00000466862 A0A1B0GU69 56 aa0.26□□□□□ -2.37
GTF3C3-209ENST00000466862 H0Y9P7 68 aa0.26□□□□□ -2.37
GTF3C3-209ENST00000466862 GNGT1P63211 74 aa0.26□□□□□ -2.37
GTF3C3-209ENST00000466862 C9orf62Q8N4C0 152 aa0.26□□□□□ -2.37
GTF3C3-209ENST00000466862 PSENENQ9NZ42 101 aa0.26□□□□□ -2.37
GTF3C3-209ENST00000466862 ABCC3O15438 1527 aa0.26□□□□□ -2.37
GTF3C3-209ENST00000466862 RB1CC1Q8TDY2 1594 aa0.26□□□□□ -2.37
GTF3C3-209ENST00000466862 A0A0G2JMZ2 1700 aa0.26□□□□□ -2.37
GTF3C3-209ENST00000466862 TPRP12270 2363 aaKnown RBP0.26□□□□□ -2.37
GTF3C3-209ENST00000466862 PIEZO1Q92508 2521 aa0.26□□□□□ -2.37
GTF3C3-209ENST00000466862 ABCA12Q86UK0 2595 aa0.25□□□□□ -2.37
GTF3C3-209ENST00000466862 UBR1Q8IWV7 1749 aa0.25□□□□□ -2.37
GTF3C3-209ENST00000466862 C5P01031 1676 aa0.25□□□□□ -2.37
GTF3C3-209ENST00000466862 SHPRHQ149N8 1683 aa0.25□□□□□ -2.37
GTF3C3-209ENST00000466862 K7EP34 96 aa0.25□□□□□ -2.37
GTF3C3-209ENST00000466862 LEPROTL1O95214 131 aa0.25□□□□□ -2.37
GTF3C3-209ENST00000466862 CFDP00746 253 aaPredicted RBP0.25□□□□□ -2.37
GTF3C3-209ENST00000466862 WFDC2Q14508 124 aa0.25□□□□□ -2.37
GTF3C3-209ENST00000466862 RGPD4Q7Z3J3 1758 aa0.24□□□□□ -2.37
GTF3C3-209ENST00000466862 KIAA0556O60303 1618 aa0.24□□□□□ -2.37
GTF3C3-209ENST00000466862 CUX1P39880 1505 aa0.24□□□□□ -2.37
GTF3C3-209ENST00000466862 LRP1Q07954 4544 aaKnown RBP0.24□□□□□ -2.37
GTF3C3-209ENST00000466862 F8P00451 2351 aa0.24□□□□□ -2.37
GTF3C3-209ENST00000466862 AHCTF1Q8WYP5 2266 aa0.24□□□□□ -2.37
GTF3C3-209ENST00000466862 PVALEFA0A1B0GWK0 134 aa0.24□□□□□ -2.37
GTF3C3-209ENST00000466862 D6R8Y8 96 aa0.24□□□□□ -2.37
GTF3C3-209ENST00000466862 PEA15Q15121 130 aa0.24□□□□□ -2.37
GTF3C3-209ENST00000466862 MUSTN1Q8IVN3 82 aa0.24□□□□□ -2.37
GTF3C3-209ENST00000466862 DEFB123Q8N688 67 aa0.24□□□□□ -2.37
GTF3C3-209ENST00000466862 CHD9Q3L8U1 2897 aa0.24□□□□□ -2.37
GTF3C3-209ENST00000466862 RGPD3A6NKT7 1758 aaPredicted RBP0.24□□□□□ -2.37
GTF3C3-209ENST00000466862 GOLGA4Q13439 2230 aaKnown RBP0.23□□□□□ -2.37
GTF3C3-209ENST00000466862 SETBP1Q9Y6X0 1596 aa0.23□□□□□ -2.37
GTF3C3-209ENST00000466862 SLIT1O75093 1534 aa0.23□□□□□ -2.37
GTF3C3-209ENST00000466862 IQSEC2Q5JU85 1478 aa0.23□□□□□ -2.37
GTF3C3-209ENST00000466862 CELSR2Q9HCU4 2923 aa0.23□□□□□ -2.37
GTF3C3-209ENST00000466862 K7EQZ3 153 aa0.23□□□□□ -2.37
GTF3C3-209ENST00000466862 CYB5AP00167 134 aa0.23□□□□□ -2.37
GTF3C3-209ENST00000466862 HMGN2P05204 90 aaKnown RBP0.23□□□□□ -2.37
GTF3C3-209ENST00000466862 HMGN3Q15651 99 aa0.23□□□□□ -2.37
GTF3C3-209ENST00000466862 PYY3Q5JQD4 70 aa0.23□□□□□ -2.37
GTF3C3-209ENST00000466862 S100A16Q96FQ6 103 aaKnown RBP0.23□□□□□ -2.37
GTF3C3-209ENST00000466862 UBE2D4Q9Y2X8 147 aa0.23□□□□□ -2.37
GTF3C3-209ENST00000466862 CSMD3Q7Z407 3707 aa0.23□□□□□ -2.37
GTF3C3-209ENST00000466862 CRYBG1Q9Y4K1 1723 aa0.23□□□□□ -2.37
GTF3C3-209ENST00000466862 PPRC1Q5VV67 1664 aaKnown RBP0.23□□□□□ -2.37
GTF3C3-209ENST00000466862 SAMD9Q5K651 1589 aa0.23□□□□□ -2.37
GTF3C3-209ENST00000466862 NEXMIFQ5QGS0 1516 aa0.23□□□□□ -2.37
GTF3C3-209ENST00000466862 SPTBN2O15020 2390 aa0.23□□□□□ -2.37
GTF3C3-209ENST00000466862 DNAJC13O75165 2243 aa0.22□□□□□ -2.37
GTF3C3-209ENST00000466862 COX6B1P14854 86 aa0.22□□□□□ -2.37
GTF3C3-209ENST00000466862 SPRR1AP35321 89 aa0.22□□□□□ -2.37
GTF3C3-209ENST00000466862 SMIM11AP58511 58 aa0.22□□□□□ -2.37
GTF3C3-209ENST00000466862 Q5VSD8 79 aa0.22□□□□□ -2.37
GTF3C3-209ENST00000466862 U3KQA8 63 aa0.22□□□□□ -2.37
GTF3C3-209ENST00000466862 USP24Q9UPU5 2620 aa0.22□□□□□ -2.37
GTF3C3-209ENST00000466862 C2CD3Q4AC94 2353 aa0.21□□□□□ -2.38
GTF3C3-209ENST00000466862 PLIN4Q96Q06 1357 aa0.21□□□□□ -2.38
GTF3C3-209ENST00000466862 MYH4Q9Y623 1939 aa0.21□□□□□ -2.38
GTF3C3-209ENST00000466862 KIF14Q15058 1648 aa0.21□□□□□ -2.38
GTF3C3-209ENST00000466862 ALKQ9UM73 1620 aa0.21□□□□□ -2.38
GTF3C3-209ENST00000466862 IGLC2P0DOY2 106 aa0.21□□□□□ -2.38
GTF3C3-209ENST00000466862 IGLC3P0DOY3 106 aa0.21□□□□□ -2.38
GTF3C3-209ENST00000466862 DEFB109BQ30KR1 87 aa0.21□□□□□ -2.38
GTF3C3-209ENST00000466862 TDRG1Q3Y452 100 aa0.21□□□□□ -2.38
GTF3C3-209ENST00000466862 NMSQ5H8A3 153 aa0.21□□□□□ -2.38
GTF3C3-209ENST00000466862 ALKAL2Q6UX46 152 aa0.21□□□□□ -2.38
GTF3C3-209ENST00000466862 CRIPTQ9P021 101 aa0.21□□□□□ -2.38
GTF3C3-209ENST00000466862 PLCE1Q9P212 2302 aa0.21□□□□□ -2.38
GTF3C3-209ENST00000466862 PPLO60437 1756 aa0.21□□□□□ -2.38
GTF3C3-209ENST00000466862 MED14O60244 1454 aa0.21□□□□□ -2.38
GTF3C3-209ENST00000466862 UACAQ9BZF9 1416 aa0.21□□□□□ -2.38
GTF3C3-209ENST00000466862 TMEM131LA2VDJ0 1609 aa0.2□□□□□ -2.38
GTF3C3-209ENST00000466862 MAP3K4Q9Y6R4 1608 aa0.2□□□□□ -2.38
GTF3C3-209ENST00000466862 TSC2P49815 1807 aa0.2□□□□□ -2.38
GTF3C3-209ENST00000466862 FAT4Q6V0I7 4981 aa0.2□□□□□ -2.38
GTF3C3-209ENST00000466862 USF3Q68DE3 2245 aa0.2□□□□□ -2.38
GTF3C3-209ENST00000466862 IQCF6A8MYZ5 107 aa0.2□□□□□ -2.38
GTF3C3-209ENST00000466862 SPRR1BP22528 89 aa0.2□□□□□ -2.38
GTF3C3-209ENST00000466862 USMG5Q96IX5 58 aa0.2□□□□□ -2.38
GTF3C3-209ENST00000466862 FXYD6Q9H0Q3 95 aa0.2□□□□□ -2.38
GTF3C3-209ENST00000466862 LRRC37AA6NMS7 1700 aa0.2□□□□□ -2.38
GTF3C3-209ENST00000466862 PKD1L3Q7Z443 1732 aa0.2□□□□□ -2.38
GTF3C3-209ENST00000466862 FMN2Q9NZ56 1722 aa0.2□□□□□ -2.38
GTF3C3-209ENST00000466862 CCDC18Q5T9S5 1454 aa0.2□□□□□ -2.38
GTF3C3-209ENST00000466862 CCDC141Q6ZP82 1450 aa0.2□□□□□ -2.38
GTF3C3-209ENST00000466862 SSPOA2VEC9 5147 aa0.2□□□□□ -2.38
GTF3C3-209ENST00000466862 ZNF292O60281 2723 aa0.2□□□□□ -2.38
GTF3C3-209ENST00000466862 OTOGQ6ZRI0 2925 aa0.2□□□□□ -2.38
GTF3C3-209ENST00000466862 ANKRD36A6QL64 1941 aa0.19□□□□□ -2.38
GTF3C3-209ENST00000466862 NKTRP30414 1462 aaKnown RBP0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms