RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 REG3AQ06141 175 aa10.56□□□□□ -0.72
COL16A1-207ENST00000466829 LINC01561Q8N1V8 128 aa10.56□□□□□ -0.72
COL16A1-207ENST00000466829 C1orf43Q9BWL3 253 aa10.56□□□□□ -0.72
COL16A1-207ENST00000466829 PRR34Q9NV39 138 aa10.56□□□□□ -0.72
COL16A1-207ENST00000466829 ABCA13Q86UQ4 5058 aa10.55□□□□□ -0.72
COL16A1-207ENST00000466829 IGHV3OR16-9A0A0B4J2B5 98 aa10.55□□□□□ -0.72
COL16A1-207ENST00000466829 IGKV3OR2-268A0A0C4DH90 116 aa10.55□□□□□ -0.72
COL16A1-207ENST00000466829 J3QQQ9 107 aa10.55□□□□□ -0.72
COL16A1-207ENST00000466829 SMR3BP02814 79 aaPredicted RBP10.55□□□□□ -0.72
COL16A1-207ENST00000466829 IGLV5-39A0A0G2JS06 123 aa10.54□□□□□ -0.72
COL16A1-207ENST00000466829 MYMXA0A1B0GTQ4 84 aa10.54□□□□□ -0.72
COL16A1-207ENST00000466829 LINC00587B1AMM8 73 aa10.54□□□□□ -0.72
COL16A1-207ENST00000466829 LGALS3P17931 250 aaKnown RBP10.54□□□□□ -0.72
COL16A1-207ENST00000466829 HIGD1BQ9P298 99 aa10.54□□□□□ -0.72
COL16A1-207ENST00000466829 TRAV8-4A0A0B4J246 113 aa10.53□□□□□ -0.72
COL16A1-207ENST00000466829 SPINK8P0C7L1 97 aa10.53□□□□□ -0.72
COL16A1-207ENST00000466829 CD164L2Q6UWJ8 174 aa10.53□□□□□ -0.72
COL16A1-207ENST00000466829 A0A087WZ39 114 aa10.52□□□□□ -0.73
COL16A1-207ENST00000466829 FAM229AH3BQW9 127 aa10.52□□□□□ -0.73
COL16A1-207ENST00000466829 Q5VSD8 79 aa10.52□□□□□ -0.73
COL16A1-207ENST00000466829 CLPSL2Q6UWE3 100 aa10.52□□□□□ -0.73
COL16A1-207ENST00000466829 ENHOQ6UWT2 76 aa10.52□□□□□ -0.73
COL16A1-207ENST00000466829 ZNF815PA8K554 130 aa10.51□□□□□ -0.73
COL16A1-207ENST00000466829 SMIM1B2RUZ4 78 aa10.51□□□□□ -0.73
COL16A1-207ENST00000466829 CTAG1AP78358 180 aa10.51□□□□□ -0.73
COL16A1-207ENST00000466829 C2orf91Q6ZV80 131 aa10.51□□□□□ -0.73
COL16A1-207ENST00000466829 CHCHD10Q8WYQ3 142 aaPredicted RBP10.51□□□□□ -0.73
COL16A1-207ENST00000466829 TTTY13Q9BZ97 58 aa10.51□□□□□ -0.73
COL16A1-207ENST00000466829 TSPEAR-AS2P59090 65 aa10.5□□□□□ -0.73
COL16A1-207ENST00000466829 MIAQ16674 131 aa10.5□□□□□ -0.73
COL16A1-207ENST00000466829 C14orf177Q52M58 125 aa10.5□□□□□ -0.73
COL16A1-207ENST00000466829 FAM30AQ9NZY2 134 aa10.5□□□□□ -0.73
COL16A1-207ENST00000466829 IGHV3-64A0A075B6Q5 118 aa10.49□□□□□ -0.73
COL16A1-207ENST00000466829 INAFM2P0DMQ5 153 aa10.49□□□□□ -0.73
COL16A1-207ENST00000466829 XCL1P47992 114 aa10.49□□□□□ -0.73
COL16A1-207ENST00000466829 LINC01620Q4KN68 170 aa10.49□□□□□ -0.73
COL16A1-207ENST00000466829 M0R143 59 aa10.47□□□□□ -0.73
COL16A1-207ENST00000466829 COX7A2LO14548 114 aa10.47□□□□□ -0.73
COL16A1-207ENST00000466829 C5orf38Q86SI9 138 aa10.47□□□□□ -0.73
COL16A1-207ENST00000466829 TP73-AS1Q9UF72 201 aa10.47□□□□□ -0.73
COL16A1-207ENST00000466829 NDUFA12Q9UI09 145 aa10.47□□□□□ -0.73
COL16A1-207ENST00000466829 FOXI1Q12951 378 aa10.46□□□□□ -0.73
COL16A1-207ENST00000466829 TAL2Q16559 108 aa10.46□□□□□ -0.73
COL16A1-207ENST00000466829 SCGB1D4Q6XE38 83 aa10.46□□□□□ -0.73
COL16A1-207ENST00000466829 IGLV10-54A0A075B6I4 117 aa10.45□□□□□ -0.74
COL16A1-207ENST00000466829 USP17L23D6RBM5 183 aa10.45□□□□□ -0.74
COL16A1-207ENST00000466829 NDUFA1O15239 70 aa10.45□□□□□ -0.74
COL16A1-207ENST00000466829 HSD52Q0P140 79 aa10.45□□□□□ -0.74
COL16A1-207ENST00000466829 COX7B2Q8TF08 81 aa10.45□□□□□ -0.74
COL16A1-207ENST00000466829 GAGE12HA6NDE8 117 aa10.44□□□□□ -0.74
COL16A1-207ENST00000466829 SFTA2Q6UW10 78 aa10.44□□□□□ -0.74
COL16A1-207ENST00000466829 APOMO95445 188 aa10.43□□□□□ -0.74
COL16A1-207ENST00000466829 HERV-K104P63124 156 aa10.43□□□□□ -0.74
COL16A1-207ENST00000466829 A0A0J9YXY3 114 aa10.42□□□□□ -0.74
COL16A1-207ENST00000466829 MALP21145 153 aa10.42□□□□□ -0.74
COL16A1-207ENST00000466829 Q8IZM0 81 aa10.42□□□□□ -0.74
COL16A1-207ENST00000466829 SNHG12Q9BXW3 62 aa10.42□□□□□ -0.74
COL16A1-207ENST00000466829 SPANXB1Q9NS25 103 aaPredicted RBP10.42□□□□□ -0.74
COL16A1-207ENST00000466829 TIMM17BO60830 172 aa10.41□□□□□ -0.74
COL16A1-207ENST00000466829 LBHQ53QV2 105 aaPredicted RBP10.41□□□□□ -0.74
COL16A1-207ENST00000466829 KRTAP26-1Q6PEX3 210 aa10.41□□□□□ -0.74
COL16A1-207ENST00000466829 Q6ZSA8 131 aa10.41□□□□□ -0.74
COL16A1-207ENST00000466829 ZNF625Q96I27 306 aaPredicted RBP10.41□□□□□ -0.74
COL16A1-207ENST00000466829 PLA2G1BP04054 148 aaKnown RBP10.4□□□□□ -0.74
COL16A1-207ENST00000466829 PRSS2P07478 247 aa10.4□□□□□ -0.74
COL16A1-207ENST00000466829 HINT1P49773 126 aaPredicted RBP10.4□□□□□ -0.74
COL16A1-207ENST00000466829 C6orf226Q5I0X4 101 aa10.4□□□□□ -0.74
COL16A1-207ENST00000466829 BVES-AS1Q5T3Y7 98 aa10.4□□□□□ -0.74
COL16A1-207ENST00000466829 HIST1H4GQ99525 98 aa10.4□□□□□ -0.74
COL16A1-207ENST00000466829 TOMM7Q9P0U1 55 aa10.4□□□□□ -0.74
COL16A1-207ENST00000466829 TMEM238C9JI98 176 aa10.39□□□□□ -0.75
COL16A1-207ENST00000466829 SRSF9Q13242 221 aaKnown RBP eCLIP10.39□□□□□ -0.75
COL16A1-207ENST00000466829 CIRBPQ14011 172 aaKnown RBP10.39□□□□□ -0.75
COL16A1-207ENST00000466829 Q6ZVH6 145 aa10.39□□□□□ -0.75
COL16A1-207ENST00000466829 SCXQ7RTU7 201 aa10.39□□□□□ -0.75
COL16A1-207ENST00000466829 LINC00528Q8N1L1 170 aa10.39□□□□□ -0.75
COL16A1-207ENST00000466829 CXCL5P42830 114 aa10.38□□□□□ -0.75
COL16A1-207ENST00000466829 CEND1Q8N111 149 aa10.38□□□□□ -0.75
COL16A1-207ENST00000466829 ORAOV1Q8WV07 137 aa10.38□□□□□ -0.75
COL16A1-207ENST00000466829 FAT1Q14517 4588 aa10.38□□□□□ -0.75
COL16A1-207ENST00000466829 KIAA0087Q14695 138 aa10.37□□□□□ -0.75
COL16A1-207ENST00000466829 CFAP161Q6P656 301 aa10.37□□□□□ -0.75
COL16A1-207ENST00000466829 SPANXDQ9BXN6 97 aa10.36□□□□□ -0.75
COL16A1-207ENST00000466829 SPANXCQ9NY87 97 aa10.36□□□□□ -0.75
COL16A1-207ENST00000466829 BATFQ16520 125 aa10.35□□□□□ -0.75
COL16A1-207ENST00000466829 LITAFQ99732 161 aa10.35□□□□□ -0.75
COL16A1-207ENST00000466829 CKS1BP61024 79 aa10.34□□□□□ -0.75
COL16A1-207ENST00000466829 COL5A1-AS1Q5SY13 56 aa10.34□□□□□ -0.75
COL16A1-207ENST00000466829 CIRBP-AS1Q8TBR5 109 aa10.34□□□□□ -0.75
COL16A1-207ENST00000466829 A6NDN8 102 aa10.33□□□□□ -0.76
COL16A1-207ENST00000466829 F8WDY8 70 aa10.33□□□□□ -0.76
COL16A1-207ENST00000466829 IFITM1P13164 125 aa10.33□□□□□ -0.76
COL16A1-207ENST00000466829 PTTG1IPP53801 180 aa10.33□□□□□ -0.76
COL16A1-207ENST00000466829 SPAG11BQ08648 103 aa10.33□□□□□ -0.76
COL16A1-207ENST00000466829 MEIG1Q5JSS6 88 aa10.33□□□□□ -0.76
COL16A1-207ENST00000466829 COPS9Q8WXC6 57 aa10.33□□□□□ -0.76
COL16A1-207ENST00000466829 SRRM2Q9UQ35 2752 aaKnown RBP10.32□□□□□ -0.76
COL16A1-207ENST00000466829 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.32□□□□□ -0.76
COL16A1-207ENST00000466829 TMEM238LA0A1B0GVL6 79 aa10.32□□□□□ -0.76
COL16A1-207ENST00000466829 A6NJY4 79 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms