RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 LCN9Q8WX39 176 aa-0.37□□□□□ -2.47
CHMP2B-202ENST00000466696 PP6455Q8WZ26 134 aa-0.37□□□□□ -2.47
CHMP2B-202ENST00000466696 LINC00474Q9P2X8 69 aa-0.37□□□□□ -2.47
CHMP2B-202ENST00000466696 PATJQ8NI35 1801 aa-0.37□□□□□ -2.47
CHMP2B-202ENST00000466696 SPTBN4Q9H254 2564 aa-0.37□□□□□ -2.47
CHMP2B-202ENST00000466696 NLRP1Q9C000 1473 aa-0.37□□□□□ -2.47
CHMP2B-202ENST00000466696 DOCK1Q14185 1865 aa-0.37□□□□□ -2.47
CHMP2B-202ENST00000466696 SCAPERQ9BY12 1400 aa-0.38□□□□□ -2.47
CHMP2B-202ENST00000466696 A0A0G2JMZ2 1700 aa-0.38□□□□□ -2.47
CHMP2B-202ENST00000466696 SPTY2D1-AS1A0A0U1RR47 76 aa-0.38□□□□□ -2.47
CHMP2B-202ENST00000466696 LOC105371267A0A1B0GV96 52 aa-0.38□□□□□ -2.47
CHMP2B-202ENST00000466696 TMEM262E9PQX1 116 aa-0.38□□□□□ -2.47
CHMP2B-202ENST00000466696 S100A12P80511 92 aa-0.38□□□□□ -2.47
CHMP2B-202ENST00000466696 USP9YO00507 2555 aaPredicted RBP-0.38□□□□□ -2.47
CHMP2B-202ENST00000466696 PCLOQ9Y6V0 5065 aa-0.38□□□□□ -2.47
CHMP2B-202ENST00000466696 FASNP49327 2511 aaKnown RBP-0.39□□□□□ -2.47
CHMP2B-202ENST00000466696 PLEKHH2Q8IVE3 1493 aa-0.39□□□□□ -2.47
CHMP2B-202ENST00000466696 MBD5Q9P267 1494 aa-0.39□□□□□ -2.47
CHMP2B-202ENST00000466696 KNL1Q8NG31 2342 aa-0.39□□□□□ -2.47
CHMP2B-202ENST00000466696 A0A087WVE0 104 aa-0.39□□□□□ -2.47
CHMP2B-202ENST00000466696 A0A0G2JND7 137 aa-0.39□□□□□ -2.47
CHMP2B-202ENST00000466696 SPRR2EP22531 72 aa-0.39□□□□□ -2.47
CHMP2B-202ENST00000466696 GNG4P50150 75 aa-0.39□□□□□ -2.47
CHMP2B-202ENST00000466696 PSMG4Q5JS54 123 aa-0.39□□□□□ -2.47
CHMP2B-202ENST00000466696 CGREF1Q99674 301 aa-0.39□□□□□ -2.47
CHMP2B-202ENST00000466696 DPH3P1Q9H4G8 78 aa-0.39□□□□□ -2.47
CHMP2B-202ENST00000466696 LINC00846Q9NV44 126 aa-0.39□□□□□ -2.47
CHMP2B-202ENST00000466696 CDKN2A-AS1Q9UH64 79 aa-0.39□□□□□ -2.47
CHMP2B-202ENST00000466696 XRN1Q8IZH2 1706 aaKnown RBP-0.39□□□□□ -2.47
CHMP2B-202ENST00000466696 SLIT1O75093 1534 aa-0.39□□□□□ -2.47
CHMP2B-202ENST00000466696 FAT1Q14517 4588 aa-0.39□□□□□ -2.47
CHMP2B-202ENST00000466696 NEBP20929 6669 aa-0.39□□□□□ -2.47
CHMP2B-202ENST00000466696 EDC4Q6P2E9 1401 aaKnown RBP-0.39□□□□□ -2.47
CHMP2B-202ENST00000466696 A2ML1A8K2U0 1454 aa-0.4□□□□□ -2.47
CHMP2B-202ENST00000466696 ADGRL2O95490 1459 aa-0.4□□□□□ -2.47
CHMP2B-202ENST00000466696 ROCK2O75116 1388 aaKnown RBP-0.4□□□□□ -2.47
CHMP2B-202ENST00000466696 C7orf77A4D0Y5 90 aa-0.4□□□□□ -2.47
CHMP2B-202ENST00000466696 H0Y9P7 68 aa-0.4□□□□□ -2.47
CHMP2B-202ENST00000466696 NDUFA2O43678 99 aa-0.4□□□□□ -2.47
CHMP2B-202ENST00000466696 S100A1P23297 94 aa-0.4□□□□□ -2.47
CHMP2B-202ENST00000466696 PPP3R1P63098 170 aa-0.4□□□□□ -2.47
CHMP2B-202ENST00000466696 PMCHL1Q16048 86 aa-0.4□□□□□ -2.47
CHMP2B-202ENST00000466696 KRTAP20-2Q3LI61 65 aa-0.4□□□□□ -2.47
CHMP2B-202ENST00000466696 KRTAP6-2Q3LI66 62 aa-0.4□□□□□ -2.47
CHMP2B-202ENST00000466696 GTF2H5Q6ZYL4 71 aa-0.4□□□□□ -2.47
CHMP2B-202ENST00000466696 DEFB107AQ8IZN7 70 aa-0.4□□□□□ -2.47
CHMP2B-202ENST00000466696 MRPL34Q9BQ48 92 aaKnown RBP-0.4□□□□□ -2.47
CHMP2B-202ENST00000466696 AP4S1Q9Y587 144 aa-0.4□□□□□ -2.47
CHMP2B-202ENST00000466696 TOP2BQ02880 1626 aa-0.4□□□□□ -2.47
CHMP2B-202ENST00000466696 LAMA5O15230 3695 aa-0.4□□□□□ -2.47
CHMP2B-202ENST00000466696 HECTD1Q9ULT8 2610 aa-0.4□□□□□ -2.47
CHMP2B-202ENST00000466696 TET3O43151 1660 aa-0.4□□□□□ -2.47
CHMP2B-202ENST00000466696 NKTRP30414 1462 aaKnown RBP-0.41□□□□□ -2.47
CHMP2B-202ENST00000466696 FLGP20930 4061 aaPredicted RBP-0.41□□□□□ -2.47
CHMP2B-202ENST00000466696 NBASA2RRP1 2371 aa-0.41□□□□□ -2.47
CHMP2B-202ENST00000466696 TRBV7-7A0A0K0K1E9 115 aa-0.41□□□□□ -2.48
CHMP2B-202ENST00000466696 TMEM218A2RU14 115 aa-0.41□□□□□ -2.48
CHMP2B-202ENST00000466696 K7EP13 123 aa-0.41□□□□□ -2.48
CHMP2B-202ENST00000466696 HMGN1P05114 100 aa-0.41□□□□□ -2.48
CHMP2B-202ENST00000466696 ARMS2P0C7Q2 107 aa-0.41□□□□□ -2.48
CHMP2B-202ENST00000466696 RPL13AP3Q6NVV1 102 aa-0.41□□□□□ -2.48
CHMP2B-202ENST00000466696 HIGD1BQ9P298 99 aa-0.41□□□□□ -2.48
CHMP2B-202ENST00000466696 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.41□□□□□ -2.48
CHMP2B-202ENST00000466696 ABCC5O15440 1437 aa-0.41□□□□□ -2.48
CHMP2B-202ENST00000466696 CLIP1P30622 1438 aa-0.41□□□□□ -2.48
CHMP2B-202ENST00000466696 BTAF1O14981 1849 aa-0.41□□□□□ -2.48
CHMP2B-202ENST00000466696 ARHGEF5Q12774 1597 aa-0.41□□□□□ -2.48
CHMP2B-202ENST00000466696 DIP2CQ9Y2E4 1556 aa-0.41□□□□□ -2.48
CHMP2B-202ENST00000466696 MYOM2P54296 1465 aa-0.41□□□□□ -2.48
CHMP2B-202ENST00000466696 PRKDCP78527 4128 aaKnown RBP-0.42□□□□□ -2.48
CHMP2B-202ENST00000466696 PSME4Q14997 1843 aa-0.42□□□□□ -2.48
CHMP2B-202ENST00000466696 H3BQ15 152 aa-0.42□□□□□ -2.48
CHMP2B-202ENST00000466696 UQCRHP07919 91 aa-0.42□□□□□ -2.48
CHMP2B-202ENST00000466696 RPL38P63173 70 aaKnown RBP-0.42□□□□□ -2.48
CHMP2B-202ENST00000466696 MRPS10P82664 201 aaKnown RBP-0.42□□□□□ -2.48
CHMP2B-202ENST00000466696 GNG8Q9UK08 70 aa-0.42□□□□□ -2.48
CHMP2B-202ENST00000466696 IER3IP1Q9Y5U9 82 aa-0.42□□□□□ -2.48
CHMP2B-202ENST00000466696 HERC2O95714 4834 aa-0.42□□□□□ -2.48
CHMP2B-202ENST00000466696 FMN2Q9NZ56 1722 aa-0.42□□□□□ -2.48
CHMP2B-202ENST00000466696 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.42□□□□□ -2.48
CHMP2B-202ENST00000466696 ITPR3Q14573 2671 aa-0.42□□□□□ -2.48
CHMP2B-202ENST00000466696 SVEP1Q4LDE5 3571 aa-0.42□□□□□ -2.48
CHMP2B-202ENST00000466696 ARHGAP5Q13017 1502 aa-0.43□□□□□ -2.48
CHMP2B-202ENST00000466696 UNC13AQ9UPW8 1703 aa-0.43□□□□□ -2.48
CHMP2B-202ENST00000466696 NDUFC1O43677 76 aa-0.43□□□□□ -2.48
CHMP2B-202ENST00000466696 HSD52Q0P140 79 aa-0.43□□□□□ -2.48
CHMP2B-202ENST00000466696 NMSQ5H8A3 153 aa-0.43□□□□□ -2.48
CHMP2B-202ENST00000466696 WFDC13Q8IUB5 93 aa-0.43□□□□□ -2.48
CHMP2B-202ENST00000466696 HIVEP1P15822 2718 aa-0.43□□□□□ -2.48
CHMP2B-202ENST00000466696 TCHHQ07283 1943 aa-0.43□□□□□ -2.48
CHMP2B-202ENST00000466696 SONP18583 2426 aaKnown RBP-0.43□□□□□ -2.48
CHMP2B-202ENST00000466696 ZFHX3Q15911 3703 aa-0.43□□□□□ -2.48
CHMP2B-202ENST00000466696 MYO18BQ8IUG5 2567 aa-0.44□□□□□ -2.48
CHMP2B-202ENST00000466696 H3BNG1 76 aa-0.44□□□□□ -2.48
CHMP2B-202ENST00000466696 ASIPP42127 132 aa-0.44□□□□□ -2.48
CHMP2B-202ENST00000466696 MT4P47944 62 aa-0.44□□□□□ -2.48
CHMP2B-202ENST00000466696 ZNF720Q7Z2F6 126 aa-0.44□□□□□ -2.48
CHMP2B-202ENST00000466696 CACFD1Q9UGQ2 172 aa-0.44□□□□□ -2.48
CHMP2B-202ENST00000466696 MRC2Q9UBG0 1479 aa-0.44□□□□□ -2.48
CHMP2B-202ENST00000466696 MAPKBP1O60336 1514 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms