RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-204ENST00000466392 HERC1Q15751 4861 aa7.36□□□□□ -1.23
EDEM3-204ENST00000466392 TINCRA0A1B0GVN0 87 aa7.36□□□□□ -1.23
EDEM3-204ENST00000466392 SMIM1B2RUZ4 78 aa7.36□□□□□ -1.23
EDEM3-204ENST00000466392 F8WDY8 70 aa7.36□□□□□ -1.23
EDEM3-204ENST00000466392 J3QL48 77 aa7.36□□□□□ -1.23
EDEM3-204ENST00000466392 HBDP02042 147 aa7.36□□□□□ -1.23
EDEM3-204ENST00000466392 SPINK8P0C7L1 97 aa7.36□□□□□ -1.23
EDEM3-204ENST00000466392 SEC11AP67812 179 aa7.36□□□□□ -1.23
EDEM3-204ENST00000466392 PRR3P79522 188 aaKnown RBP7.36□□□□□ -1.23
EDEM3-204ENST00000466392 LINC01549A6NIU2 74 aa7.35□□□□□ -1.23
EDEM3-204ENST00000466392 PDZD11Q5EBL8 140 aa7.35□□□□□ -1.23
EDEM3-204ENST00000466392 C6orf226Q5I0X4 101 aa7.35□□□□□ -1.23
EDEM3-204ENST00000466392 PHF5AQ7RTV0 110 aaKnown RBP7.35□□□□□ -1.23
EDEM3-204ENST00000466392 Q8IZM0 81 aa7.35□□□□□ -1.23
EDEM3-204ENST00000466392 IGLV5-45A0A087WSX0 123 aa7.34□□□□□ -1.23
EDEM3-204ENST00000466392 TRBV30A0A0K0K1B3 111 aa7.34□□□□□ -1.23
EDEM3-204ENST00000466392 KRTAP29-1A8MX34 341 aaPredicted RBP7.34□□□□□ -1.23
EDEM3-204ENST00000466392 TRGC2P03986 189 aa7.34□□□□□ -1.23
EDEM3-204ENST00000466392 TLX1NBP0CAT3 122 aa7.34□□□□□ -1.23
EDEM3-204ENST00000466392 CKS1BP61024 79 aa7.34□□□□□ -1.23
EDEM3-204ENST00000466392 FAM19A5Q7Z5A7 132 aaPredicted RBP7.34□□□□□ -1.23
EDEM3-204ENST00000466392 RAB5BP61020 215 aa7.33□□□□□ -1.24
EDEM3-204ENST00000466392 KRTAP7-1Q8IUC3 87 aa7.33□□□□□ -1.24
EDEM3-204ENST00000466392 FAT3Q8TDW7 4589 aa7.33□□□□□ -1.24
EDEM3-204ENST00000466392 NDUFC2-KCTD14E9PQ53 114 aa7.32□□□□□ -1.24
EDEM3-204ENST00000466392 SCO1O75880 301 aa7.32□□□□□ -1.24
EDEM3-204ENST00000466392 IGLC3P0DOY3 106 aa7.32□□□□□ -1.24
EDEM3-204ENST00000466392 C9orf129Q5T035 196 aaKnown RBP7.32□□□□□ -1.24
EDEM3-204ENST00000466392 KRTAP11-1Q8IUC1 163 aa7.32□□□□□ -1.24
EDEM3-204ENST00000466392 FAM19A2Q8N3H0 131 aa7.32□□□□□ -1.24
EDEM3-204ENST00000466392 COX7B2Q8TF08 81 aa7.32□□□□□ -1.24
EDEM3-204ENST00000466392 F8VRH5 84 aa7.31□□□□□ -1.24
EDEM3-204ENST00000466392 ZNF22P17026 224 aaPredicted RBP7.31□□□□□ -1.24
EDEM3-204ENST00000466392 BAGE3Q86Y29 109 aa7.31□□□□□ -1.24
EDEM3-204ENST00000466392 C11orf86A6NJI1 115 aa7.3□□□□□ -1.24
EDEM3-204ENST00000466392 COLCA2A8K830 154 aa7.3□□□□□ -1.24
EDEM3-204ENST00000466392 ATP5LO75964 103 aa7.3□□□□□ -1.24
EDEM3-204ENST00000466392 LINC00310P59036 64 aa7.3□□□□□ -1.24
EDEM3-204ENST00000466392 CHCHD1Q96BP2 118 aaKnown RBP7.3□□□□□ -1.24
EDEM3-204ENST00000466392 XAGE1AQ9HD64 81 aa7.3□□□□□ -1.24
EDEM3-204ENST00000466392 PSORS1C2Q9UIG4 136 aa7.3□□□□□ -1.24
EDEM3-204ENST00000466392 H3BRM9 83 aa7.28□□□□□ -1.24
EDEM3-204ENST00000466392 M0QXV9 152 aa7.28□□□□□ -1.24
EDEM3-204ENST00000466392 NUPR1O60356 82 aa7.28□□□□□ -1.24
EDEM3-204ENST00000466392 HSBP1O75506 76 aa7.28□□□□□ -1.24
EDEM3-204ENST00000466392 SERF1AO75920 110 aa7.28□□□□□ -1.24
EDEM3-204ENST00000466392 OXTP01178 125 aa7.28□□□□□ -1.24
EDEM3-204ENST00000466392 SERTAD4-AS1Q5TG53 156 aa7.28□□□□□ -1.24
EDEM3-204ENST00000466392 IFI27L1Q96BM0 104 aa7.28□□□□□ -1.24
EDEM3-204ENST00000466392 CHTOPQ9Y3Y2 248 aaKnown RBP7.28□□□□□ -1.24
EDEM3-204ENST00000466392 CXCL5P42830 114 aa7.27□□□□□ -1.25
EDEM3-204ENST00000466392 C1orf137Q5JT78 98 aa7.27□□□□□ -1.25
EDEM3-204ENST00000466392 TMEM170BQ5T4T1 132 aa7.27□□□□□ -1.25
EDEM3-204ENST00000466392 IGLV5-39A0A0G2JS06 123 aa7.26□□□□□ -1.25
EDEM3-204ENST00000466392 H0Y8G0 127 aa7.26□□□□□ -1.25
EDEM3-204ENST00000466392 MT1HL1P0DM35 61 aa7.26□□□□□ -1.25
EDEM3-204ENST00000466392 ZNF625Q96I27 306 aaPredicted RBP7.25□□□□□ -1.25
EDEM3-204ENST00000466392 PFN2P35080 140 aa7.24□□□□□ -1.25
EDEM3-204ENST00000466392 UBE2BP63146 152 aa7.24□□□□□ -1.25
EDEM3-204ENST00000466392 SRSF9Q13242 221 aaKnown RBP eCLIP7.24□□□□□ -1.25
EDEM3-204ENST00000466392 TRAV12-1A0A0B4J245 112 aa7.23□□□□□ -1.25
EDEM3-204ENST00000466392 FABP4P15090 132 aa7.23□□□□□ -1.25
EDEM3-204ENST00000466392 ODF1Q14990 250 aa7.23□□□□□ -1.25
EDEM3-204ENST00000466392 SPINK6Q6UWN8 80 aa7.23□□□□□ -1.25
EDEM3-204ENST00000466392 C22orf24Q9Y442 160 aa7.23□□□□□ -1.25
EDEM3-204ENST00000466392 TMEM223A0PJW6 202 aa7.22□□□□□ -1.25
EDEM3-204ENST00000466392 LEPROTL1O95214 131 aa7.22□□□□□ -1.25
EDEM3-204ENST00000466392 IGLV7-43P04211 117 aa7.21□□□□□ -1.26
EDEM3-204ENST00000466392 PMCHL2Q9BQD1 86 aa7.21□□□□□ -1.26
EDEM3-204ENST00000466392 HIST1H2BKO60814 126 aa7.2□□□□□ -1.26
EDEM3-204ENST00000466392 HIST1H2BJP06899 126 aa7.2□□□□□ -1.26
EDEM3-204ENST00000466392 HIST1H2BOP23527 126 aa7.2□□□□□ -1.26
EDEM3-204ENST00000466392 HIST1H2BBP33778 126 aa7.2□□□□□ -1.26
EDEM3-204ENST00000466392 HIST1H2BDP58876 126 aa7.2□□□□□ -1.26
EDEM3-204ENST00000466392 HIST1H2BCP62807 126 aa7.2□□□□□ -1.26
EDEM3-204ENST00000466392 HIST2H2BEQ16778 126 aa7.2□□□□□ -1.26
EDEM3-204ENST00000466392 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.2□□□□□ -1.26
EDEM3-204ENST00000466392 HIST1H2BHQ93079 126 aa7.2□□□□□ -1.26
EDEM3-204ENST00000466392 HIST1H2BNQ99877 126 aa7.2□□□□□ -1.26
EDEM3-204ENST00000466392 HIST1H2BMQ99879 126 aa7.2□□□□□ -1.26
EDEM3-204ENST00000466392 ERG28Q9UKR5 140 aa7.2□□□□□ -1.26
EDEM3-204ENST00000466392 A0A0U1RRA0 63 aa7.19□□□□□ -1.26
EDEM3-204ENST00000466392 GAGE10A6NGK3 116 aa7.19□□□□□ -1.26
EDEM3-204ENST00000466392 RPL37AP8A6NKH3 93 aa7.19□□□□□ -1.26
EDEM3-204ENST00000466392 LINC01600Q96MT4 127 aa7.19□□□□□ -1.26
EDEM3-204ENST00000466392 MRPL55Q7Z7F7 128 aaKnown RBP7.18□□□□□ -1.26
EDEM3-204ENST00000466392 REG3GQ6UW15 175 aa7.17□□□□□ -1.26
EDEM3-204ENST00000466392 Q8NDZ9 215 aa7.17□□□□□ -1.26
EDEM3-204ENST00000466392 LINC00167Q96N53 147 aa7.17□□□□□ -1.26
EDEM3-204ENST00000466392 SND1-IT1Q9HBX3 110 aa7.17□□□□□ -1.26
EDEM3-204ENST00000466392 HSPB8Q9UJY1 196 aa7.17□□□□□ -1.26
EDEM3-204ENST00000466392 TSPEAR-AS2P59090 65 aa7.16□□□□□ -1.26
EDEM3-204ENST00000466392 LBHQ53QV2 105 aaPredicted RBP7.16□□□□□ -1.26
EDEM3-204ENST00000466392 H0Y9J4 135 aa7.15□□□□□ -1.26
EDEM3-204ENST00000466392 LINC00158P58513 81 aa7.15□□□□□ -1.26
EDEM3-204ENST00000466392 NKAPP1Q8N9T2 125 aa7.15□□□□□ -1.26
EDEM3-204ENST00000466392 TP73-AS1Q9UF72 201 aa7.15□□□□□ -1.26
EDEM3-204ENST00000466392 PLA2G2DQ9UNK4 145 aa7.15□□□□□ -1.26
EDEM3-204ENST00000466392 IGLV5-37A0A075B6J1 123 aa7.14□□□□□ -1.27
EDEM3-204ENST00000466392 IGKV2-28A0A075B6P5 120 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms