RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 IGKV2-29A2NJV5 120 aaPredicted RBP6.45□□□□□ -1.38
RTFDC1-205ENST00000466260 HAMPP81172 84 aa6.45□□□□□ -1.38
RTFDC1-205ENST00000466260 LINC00269Q8N2A0 174 aa6.45□□□□□ -1.38
RTFDC1-205ENST00000466260 PYGO1Q9Y3Y4 419 aa6.45□□□□□ -1.38
RTFDC1-205ENST00000466260 IGIPA6NJ69 53 aa6.44□□□□□ -1.38
RTFDC1-205ENST00000466260 J3QR89 54 aa6.44□□□□□ -1.38
RTFDC1-205ENST00000466260 KRTAP10-1P60331 282 aa6.44□□□□□ -1.38
RTFDC1-205ENST00000466260 PLEKHB2Q96CS7 222 aa6.44□□□□□ -1.38
RTFDC1-205ENST00000466260 H3BUT2 72 aa6.43□□□□□ -1.38
RTFDC1-205ENST00000466260 REG3AQ06141 175 aa6.43□□□□□ -1.38
RTFDC1-205ENST00000466260 MIAQ16674 131 aa6.43□□□□□ -1.38
RTFDC1-205ENST00000466260 LINC01620Q4KN68 170 aa6.43□□□□□ -1.38
RTFDC1-205ENST00000466260 SCGB1D4Q6XE38 83 aa6.43□□□□□ -1.38
RTFDC1-205ENST00000466260 C20orf203Q8NBC4 194 aa6.43□□□□□ -1.38
RTFDC1-205ENST00000466260 CST9LQ9H4G1 147 aa6.43□□□□□ -1.38
RTFDC1-205ENST00000466260 SPANXB1Q9NS25 103 aaPredicted RBP6.43□□□□□ -1.38
RTFDC1-205ENST00000466260 SPANXA1Q9NS26 97 aa6.43□□□□□ -1.38
RTFDC1-205ENST00000466260 TP73-AS1Q9UF72 201 aa6.43□□□□□ -1.38
RTFDC1-205ENST00000466260 SPCS1Q9Y6A9 102 aa6.43□□□□□ -1.38
RTFDC1-205ENST00000466260 APOBP04114 4563 aaKnown RBP6.43□□□□□ -1.38
RTFDC1-205ENST00000466260 RYR1P21817 5038 aa6.42□□□□□ -1.38
RTFDC1-205ENST00000466260 IGKV2D-26A0A0A0MRZ7 120 aa6.42□□□□□ -1.38
RTFDC1-205ENST00000466260 A0A1B0GWB2 263 aa6.42□□□□□ -1.38
RTFDC1-205ENST00000466260 ZNF815PA8K554 130 aa6.42□□□□□ -1.38
RTFDC1-205ENST00000466260 CDK2AP2O75956 126 aa6.42□□□□□ -1.38
RTFDC1-205ENST00000466260 VCX2Q9H322 139 aa6.42□□□□□ -1.38
RTFDC1-205ENST00000466260 F8W1H4 67 aa6.41□□□□□ -1.38
RTFDC1-205ENST00000466260 LGALS3P17931 250 aaKnown RBP6.41□□□□□ -1.38
RTFDC1-205ENST00000466260 SRSF9Q13242 221 aaKnown RBP eCLIP6.41□□□□□ -1.38
RTFDC1-205ENST00000466260 NTN5Q8WTR8 489 aaPredicted RBP6.41□□□□□ -1.38
RTFDC1-205ENST00000466260 NHP2Q9NX24 153 aaKnown RBP6.41□□□□□ -1.38
RTFDC1-205ENST00000466260 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.41□□□□□ -1.38
RTFDC1-205ENST00000466260 HSPG2P98160 4391 aa6.4□□□□□ -1.38
RTFDC1-205ENST00000466260 TMEM238C9JI98 176 aa6.4□□□□□ -1.38
RTFDC1-205ENST00000466260 USP17L23D6RBM5 183 aa6.4□□□□□ -1.38
RTFDC1-205ENST00000466260 LEPROTO15243 131 aa6.4□□□□□ -1.38
RTFDC1-205ENST00000466260 TSHBP01222 138 aa6.4□□□□□ -1.38
RTFDC1-205ENST00000466260 OCIAD2Q56VL3 154 aa6.4□□□□□ -1.38
RTFDC1-205ENST00000466260 TMEM170BQ5T4T1 132 aa6.4□□□□□ -1.38
RTFDC1-205ENST00000466260 Q6ZVH6 145 aa6.4□□□□□ -1.38
RTFDC1-205ENST00000466260 COPS9Q8WXC6 57 aa6.4□□□□□ -1.38
RTFDC1-205ENST00000466260 TIMM21Q9BVV7 248 aa6.4□□□□□ -1.38
RTFDC1-205ENST00000466260 PRR34Q9NV39 138 aa6.4□□□□□ -1.38
RTFDC1-205ENST00000466260 A0A1B0GUV1 79 aa6.39□□□□□ -1.39
RTFDC1-205ENST00000466260 FXYD2P54710 66 aa6.39□□□□□ -1.39
RTFDC1-205ENST00000466260 RAB37Q96AX2 223 aa6.39□□□□□ -1.39
RTFDC1-205ENST00000466260 KRTAP17-1Q9BYP8 105 aa6.39□□□□□ -1.39
RTFDC1-205ENST00000466260 KRTAP4-5Q9BYR2 181 aa6.39□□□□□ -1.39
RTFDC1-205ENST00000466260 CDIP1Q9H305 208 aa6.39□□□□□ -1.39
RTFDC1-205ENST00000466260 IGLV4-69A0A075B6H9 119 aa6.38□□□□□ -1.39
RTFDC1-205ENST00000466260 TRBV20-1A0A075B6N2 111 aa6.38□□□□□ -1.39
RTFDC1-205ENST00000466260 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.38□□□□□ -1.39
RTFDC1-205ENST00000466260 J3QQQ9 107 aa6.38□□□□□ -1.39
RTFDC1-205ENST00000466260 RPL24P83731 157 aaKnown RBP6.38□□□□□ -1.39
RTFDC1-205ENST00000466260 TMEM101Q96IK0 257 aa6.38□□□□□ -1.39
RTFDC1-205ENST00000466260 GAGE12HA6NDE8 117 aa6.37□□□□□ -1.39
RTFDC1-205ENST00000466260 SMR3BP02814 79 aaPredicted RBP6.37□□□□□ -1.39
RTFDC1-205ENST00000466260 XGP55808 180 aa6.37□□□□□ -1.39
RTFDC1-205ENST00000466260 MRPS36P82909 103 aaKnown RBP6.37□□□□□ -1.39
RTFDC1-205ENST00000466260 C14orf177Q52M58 125 aa6.37□□□□□ -1.39
RTFDC1-205ENST00000466260 RNASE13Q5GAN3 156 aaKnown RBP6.37□□□□□ -1.39
RTFDC1-205ENST00000466260 KRTAP26-1Q6PEX3 210 aa6.37□□□□□ -1.39
RTFDC1-205ENST00000466260 FAM30AQ9NZY2 134 aa6.37□□□□□ -1.39
RTFDC1-205ENST00000466260 TRAV8-4A0A0B4J246 113 aa6.36□□□□□ -1.39
RTFDC1-205ENST00000466260 TINCRA0A1B0GVN0 87 aa6.36□□□□□ -1.39
RTFDC1-205ENST00000466260 TMEM223A0PJW6 202 aa6.36□□□□□ -1.39
RTFDC1-205ENST00000466260 H7C423 109 aa6.36□□□□□ -1.39
RTFDC1-205ENST00000466260 UBE2D1P51668 147 aa6.36□□□□□ -1.39
RTFDC1-205ENST00000466260 DGAT2L7PQ6IED9 249 aa6.36□□□□□ -1.39
RTFDC1-205ENST00000466260 AMELXQ99217 191 aa6.36□□□□□ -1.39
RTFDC1-205ENST00000466260 VPS25Q9BRG1 176 aa6.36□□□□□ -1.39
RTFDC1-205ENST00000466260 IGLV4-3A0A075B6K6 122 aa6.35□□□□□ -1.39
RTFDC1-205ENST00000466260 XCL1P47992 114 aa6.35□□□□□ -1.39
RTFDC1-205ENST00000466260 RPL39P62891 51 aaKnown RBP6.35□□□□□ -1.39
RTFDC1-205ENST00000466260 Q8N1X5 172 aa6.35□□□□□ -1.39
RTFDC1-205ENST00000466260 CHCHD10Q8WYQ3 142 aaPredicted RBP6.35□□□□□ -1.39
RTFDC1-205ENST00000466260 CSDC2Q9Y534 153 aaKnown RBP6.35□□□□□ -1.39
RTFDC1-205ENST00000466260 A0A0J9YXY3 114 aa6.34□□□□□ -1.39
RTFDC1-205ENST00000466260 TIMM17BO60830 172 aa6.34□□□□□ -1.39
RTFDC1-205ENST00000466260 HIGD2BQ4VC39 106 aa6.34□□□□□ -1.39
RTFDC1-205ENST00000466260 Q6ZUT4 128 aa6.34□□□□□ -1.39
RTFDC1-205ENST00000466260 GEMIN7Q9H840 131 aaKnown RBP6.34□□□□□ -1.39
RTFDC1-205ENST00000466260 PLA2G2DQ9UNK4 145 aa6.34□□□□□ -1.39
RTFDC1-205ENST00000466260 UBE2D4Q9Y2X8 147 aa6.34□□□□□ -1.39
RTFDC1-205ENST00000466260 DNAH8Q96JB1 4490 aa6.34□□□□□ -1.39
RTFDC1-205ENST00000466260 A0A0B4J2C4 111 aa6.33□□□□□ -1.4
RTFDC1-205ENST00000466260 LINC00959A0A1B0GUT2 108 aa6.33□□□□□ -1.4
RTFDC1-205ENST00000466260 EPM2AB3EWF7 344 aa6.33□□□□□ -1.4
RTFDC1-205ENST00000466260 IFITM1P13164 125 aa6.33□□□□□ -1.4
RTFDC1-205ENST00000466260 ZNF22P17026 224 aaPredicted RBP6.33□□□□□ -1.4
RTFDC1-205ENST00000466260 HERVK_113P63121 156 aa6.33□□□□□ -1.4
RTFDC1-205ENST00000466260 CIRBPQ14011 172 aaKnown RBP6.33□□□□□ -1.4
RTFDC1-205ENST00000466260 Q5VSD8 79 aa6.33□□□□□ -1.4
RTFDC1-205ENST00000466260 TTTY13Q9BZ97 58 aa6.33□□□□□ -1.4
RTFDC1-205ENST00000466260 IGHV1-58A0A0C4DH39 117 aa6.32□□□□□ -1.4
RTFDC1-205ENST00000466260 SS18Q15532 418 aa6.32□□□□□ -1.4
RTFDC1-205ENST00000466260 C15orf56Q8N910 161 aa6.32□□□□□ -1.4
RTFDC1-205ENST00000466260 PPDPFQ9H3Y8 114 aa6.32□□□□□ -1.4
RTFDC1-205ENST00000466260 CDC42SE2Q9NRR3 84 aa6.32□□□□□ -1.4
RTFDC1-205ENST00000466260 PRO1854Q9UHT4 67 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms