RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 IFITM1P13164 125 aa7.2□□□□□ -1.26
NPHP3-203ENST00000465756 USP17L23D6RBM5 183 aa7.2□□□□□ -1.26
NPHP3-203ENST00000465756 C20orf203Q8NBC4 194 aa7.2□□□□□ -1.26
NPHP3-203ENST00000465756 F8WDY8 70 aa7.19□□□□□ -1.26
NPHP3-203ENST00000465756 TSHBP01222 138 aa7.19□□□□□ -1.26
NPHP3-203ENST00000465756 CHCHD10Q8WYQ3 142 aaPredicted RBP7.19□□□□□ -1.26
NPHP3-203ENST00000465756 F8W1H4 67 aa7.19□□□□□ -1.26
NPHP3-203ENST00000465756 IGKCP01834 107 aa7.19□□□□□ -1.26
NPHP3-203ENST00000465756 Q6ZUT4 128 aa7.19□□□□□ -1.26
NPHP3-203ENST00000465756 FAM229AH3BQW9 127 aa7.19□□□□□ -1.26
NPHP3-203ENST00000465756 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.18□□□□□ -1.26
NPHP3-203ENST00000465756 A6NJY4 79 aa7.18□□□□□ -1.26
NPHP3-203ENST00000465756 CHCHD1Q96BP2 118 aaKnown RBP7.18□□□□□ -1.26
NPHP3-203ENST00000465756 COX7A2LO14548 114 aa7.18□□□□□ -1.26
NPHP3-203ENST00000465756 SPANXB1Q9NS25 103 aaPredicted RBP7.18□□□□□ -1.26
NPHP3-203ENST00000465756 Q9UF83 564 aa7.18□□□□□ -1.26
NPHP3-203ENST00000465756 IGLV10-54A0A075B6I4 117 aa7.18□□□□□ -1.26
NPHP3-203ENST00000465756 ENHOQ6UWT2 76 aa7.18□□□□□ -1.26
NPHP3-203ENST00000465756 NRACQ8N912 160 aa7.18□□□□□ -1.26
NPHP3-203ENST00000465756 VCX2Q9H322 139 aa7.18□□□□□ -1.26
NPHP3-203ENST00000465756 PPDPFQ9H3Y8 114 aa7.18□□□□□ -1.26
NPHP3-203ENST00000465756 DYNC2H1Q8NCM8 4307 aaKnown RBP7.17□□□□□ -1.26
NPHP3-203ENST00000465756 NPYP01303 97 aa7.17□□□□□ -1.26
NPHP3-203ENST00000465756 FOXI1Q12951 378 aa7.17□□□□□ -1.26
NPHP3-203ENST00000465756 CD164L2Q6UWJ8 174 aa7.17□□□□□ -1.26
NPHP3-203ENST00000465756 DPM2O94777 84 aa7.17□□□□□ -1.26
NPHP3-203ENST00000465756 MRPS36P82909 103 aaKnown RBP7.17□□□□□ -1.26
NPHP3-203ENST00000465756 LINC00474Q9P2X8 69 aa7.17□□□□□ -1.26
NPHP3-203ENST00000465756 LOC107984640A0A0U1RRK4 108 aa7.16□□□□□ -1.26
NPHP3-203ENST00000465756 MRPL35Q9NZE8 188 aaKnown RBP7.16□□□□□ -1.26
NPHP3-203ENST00000465756 IGKV2D-26A0A0A0MRZ7 120 aa7.16□□□□□ -1.26
NPHP3-203ENST00000465756 PMVKQ15126 192 aa7.16□□□□□ -1.26
NPHP3-203ENST00000465756 C2orf91Q6ZV80 131 aa7.16□□□□□ -1.26
NPHP3-203ENST00000465756 TMEM141Q96I45 108 aa7.16□□□□□ -1.26
NPHP3-203ENST00000465756 PYGO1Q9Y3Y4 419 aa7.16□□□□□ -1.26
NPHP3-203ENST00000465756 LECT2O14960 151 aa7.15□□□□□ -1.26
NPHP3-203ENST00000465756 XCL1P47992 114 aa7.15□□□□□ -1.26
NPHP3-203ENST00000465756 TRAV13-1A0A0B4J241 112 aa7.15□□□□□ -1.26
NPHP3-203ENST00000465756 LINC00959A0A1B0GUT2 108 aa7.15□□□□□ -1.26
NPHP3-203ENST00000465756 LRCOL1A6NCL2 159 aa7.15□□□□□ -1.26
NPHP3-203ENST00000465756 PLA2G1BP04054 148 aaKnown RBP7.15□□□□□ -1.26
NPHP3-203ENST00000465756 PPDPFLQ8WWR9 84 aa7.15□□□□□ -1.26
NPHP3-203ENST00000465756 ZNF625Q96I27 306 aaPredicted RBP7.15□□□□□ -1.26
NPHP3-203ENST00000465756 SCGB3A1Q96QR1 104 aa7.15□□□□□ -1.26
NPHP3-203ENST00000465756 CDC42SE2Q9NRR3 84 aa7.15□□□□□ -1.26
NPHP3-203ENST00000465756 IGLV4-60A0A075B6I1 120 aa7.15□□□□□ -1.27
NPHP3-203ENST00000465756 CEND1Q8N111 149 aa7.14□□□□□ -1.27
NPHP3-203ENST00000465756 C2orf66Q6UXQ4 117 aa7.13□□□□□ -1.27
NPHP3-203ENST00000465756 ERG28Q9UKR5 140 aa7.13□□□□□ -1.27
NPHP3-203ENST00000465756 ANKRD29Q8N6D5 301 aa7.13□□□□□ -1.27
NPHP3-203ENST00000465756 UBE2D4Q9Y2X8 147 aa7.13□□□□□ -1.27
NPHP3-203ENST00000465756 A0A0U1RQV1 116 aa7.12□□□□□ -1.27
NPHP3-203ENST00000465756 C2orf82Q6UX34 121 aa7.12□□□□□ -1.27
NPHP3-203ENST00000465756 Q8N3U1 123 aa7.12□□□□□ -1.27
NPHP3-203ENST00000465756 FAM236AA0A1B0GUQ0 79 aa7.12□□□□□ -1.27
NPHP3-203ENST00000465756 FAM236BA0A1B0GV22 79 aa7.12□□□□□ -1.27
NPHP3-203ENST00000465756 ATP5LO75964 103 aa7.12□□□□□ -1.27
NPHP3-203ENST00000465756 EPM2AB3EWF7 344 aa7.12□□□□□ -1.27
NPHP3-203ENST00000465756 C7orf33Q8WU49 177 aa7.12□□□□□ -1.27
NPHP3-203ENST00000465756 CARD19Q96LW7 228 aa7.12□□□□□ -1.27
NPHP3-203ENST00000465756 SLC25A20O43772 301 aa7.11□□□□□ -1.27
NPHP3-203ENST00000465756 NDUFV3P56181 108 aaKnown RBP7.11□□□□□ -1.27
NPHP3-203ENST00000465756 HERVK_113P63121 156 aa7.11□□□□□ -1.27
NPHP3-203ENST00000465756 LINC01561Q8N1V8 128 aa7.11□□□□□ -1.27
NPHP3-203ENST00000465756 MAPKAPK5-AS1Q8N8E1 139 aa7.11□□□□□ -1.27
NPHP3-203ENST00000465756 CAMK2N2Q96S95 79 aa7.11□□□□□ -1.27
NPHP3-203ENST00000465756 TIMM17AQ99595 171 aa7.11□□□□□ -1.27
NPHP3-203ENST00000465756 LGALS3P17931 250 aaKnown RBP7.11□□□□□ -1.27
NPHP3-203ENST00000465756 KRTAP10-2P60368 255 aa7.11□□□□□ -1.27
NPHP3-203ENST00000465756 SYCNQ0VAF6 134 aa7.11□□□□□ -1.27
NPHP3-203ENST00000465756 LINC01545Q5VT33 79 aa7.11□□□□□ -1.27
NPHP3-203ENST00000465756 C2orf48Q96LS8 159 aa7.11□□□□□ -1.27
NPHP3-203ENST00000465756 NDUFA1O15239 70 aa7.1□□□□□ -1.27
NPHP3-203ENST00000465756 CNBPP62633 177 aaKnown RBP7.1□□□□□ -1.27
NPHP3-203ENST00000465756 HIST1H4AP62805 103 aaKnown RBP7.1□□□□□ -1.27
NPHP3-203ENST00000465756 IGLV4-69A0A075B6H9 119 aa7.1□□□□□ -1.27
NPHP3-203ENST00000465756 GVQW2A0A096LPI5 108 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-203ENST00000465756 SPAG11BQ08648 103 aa7.1□□□□□ -1.27
NPHP3-203ENST00000465756 GAGE2AQ6NT46 116 aa7.1□□□□□ -1.27
NPHP3-203ENST00000465756 C9orf163Q8N9P6 203 aa7.1□□□□□ -1.27
NPHP3-203ENST00000465756 CIRBPQ14011 172 aaKnown RBP7.09□□□□□ -1.27
NPHP3-203ENST00000465756 S100A7L2Q5SY68 101 aa7.09□□□□□ -1.27
NPHP3-203ENST00000465756 OR13C6PQ8NH95 151 aa7.09□□□□□ -1.27
NPHP3-203ENST00000465756 COX6CP09669 75 aa7.09□□□□□ -1.27
NPHP3-203ENST00000465756 CXCL5P42830 114 aa7.09□□□□□ -1.27
NPHP3-203ENST00000465756 TEX49A0A1B0GTD5 131 aa7.08□□□□□ -1.28
NPHP3-203ENST00000465756 HIGD2BQ4VC39 106 aa7.08□□□□□ -1.28
NPHP3-203ENST00000465756 URB1-AS1Q96HZ7 61 aa7.08□□□□□ -1.28
NPHP3-203ENST00000465756 PLECQ15149 4684 aaKnown RBP7.07□□□□□ -1.28
NPHP3-203ENST00000465756 TEN1Q86WV5 123 aa7.07□□□□□ -1.28
NPHP3-203ENST00000465756 Q8N1X5 172 aa7.07□□□□□ -1.28
NPHP3-203ENST00000465756 HRCT1Q6UXD1 115 aa7.06□□□□□ -1.28
NPHP3-203ENST00000465756 C5orf38Q86SI9 138 aa7.06□□□□□ -1.28
NPHP3-203ENST00000465756 RPL39P62891 51 aaKnown RBP7.06□□□□□ -1.28
NPHP3-203ENST00000465756 TOMM6Q96B49 74 aa7.06□□□□□ -1.28
NPHP3-203ENST00000465756 GAS8-AS1O95177 125 aa7.05□□□□□ -1.28
NPHP3-203ENST00000465756 KRTAP10-1P60331 282 aa7.05□□□□□ -1.28
NPHP3-203ENST00000465756 IGLV4-3A0A075B6K6 122 aa7.05□□□□□ -1.28
NPHP3-203ENST00000465756 C6orf226Q5I0X4 101 aa7.05□□□□□ -1.28
NPHP3-203ENST00000465756 DNAH7Q8WXX0 4024 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms