RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 ZNF492Q9P255 531 aa3.32□□□□□ -1.88
CACNA1C-223ENST00000465278 EPDR1Q9UM22 224 aa3.32□□□□□ -1.88
CACNA1C-223ENST00000465278 BUB1B-PAK6H3BSN5 160 aa3.31□□□□□ -1.88
CACNA1C-223ENST00000465278 KLK9Q2XQG4 91 aa3.31□□□□□ -1.88
CACNA1C-223ENST00000465278 RPL39P5Q59GN2 51 aa3.31□□□□□ -1.88
CACNA1C-223ENST00000465278 FP248Q71RG6 208 aaPredicted RBP3.31□□□□□ -1.88
CACNA1C-223ENST00000465278 NDUFA11Q86Y39 141 aa3.31□□□□□ -1.88
CACNA1C-223ENST00000465278 METTL26Q96S19 204 aa3.31□□□□□ -1.88
CACNA1C-223ENST00000465278 TMEM14BQ9NUH8 114 aa3.31□□□□□ -1.88
CACNA1C-223ENST00000465278 KLK9Q9UKQ9 250 aa3.31□□□□□ -1.88
CACNA1C-223ENST00000465278 F11RQ9Y624 299 aaKnown RBP3.31□□□□□ -1.88
CACNA1C-223ENST00000465278 TRBV10-2A0A0K0K1G8 114 aa3.3□□□□□ -1.88
CACNA1C-223ENST00000465278 C19orf71A6NCJ1 209 aa3.3□□□□□ -1.88
CACNA1C-223ENST00000465278 H3BMM0 161 aa3.3□□□□□ -1.88
CACNA1C-223ENST00000465278 NDUFA3O95167 84 aa3.3□□□□□ -1.88
CACNA1C-223ENST00000465278 IGKV1-16P04430 117 aa3.3□□□□□ -1.88
CACNA1C-223ENST00000465278 MYCNOSP40205 109 aa3.3□□□□□ -1.88
CACNA1C-223ENST00000465278 UBE2D1P51668 147 aa3.3□□□□□ -1.88
CACNA1C-223ENST00000465278 ORMDL2Q53FV1 153 aa3.3□□□□□ -1.88
CACNA1C-223ENST00000465278 MINOS1Q5TGZ0 78 aa3.3□□□□□ -1.88
CACNA1C-223ENST00000465278 ZFP2Q6ZN57 461 aa3.3□□□□□ -1.88
CACNA1C-223ENST00000465278 Q8N6K4 173 aa3.3□□□□□ -1.88
CACNA1C-223ENST00000465278 TMEM75Q8N9X5 138 aa3.3□□□□□ -1.88
CACNA1C-223ENST00000465278 TMEM167AQ8TBQ9 72 aa3.3□□□□□ -1.88
CACNA1C-223ENST00000465278 C7orf33Q8WU49 177 aa3.3□□□□□ -1.88
CACNA1C-223ENST00000465278 LEAP2Q969E1 77 aa3.3□□□□□ -1.88
CACNA1C-223ENST00000465278 UBE2WQ96B02 151 aa3.3□□□□□ -1.88
CACNA1C-223ENST00000465278 TOMM6Q96B49 74 aa3.3□□□□□ -1.88
CACNA1C-223ENST00000465278 MINOS1-NBL1R4GNA1 71 aa3.3□□□□□ -1.88
CACNA1C-223ENST00000465278 V9GYV3 84 aa3.3□□□□□ -1.88
CACNA1C-223ENST00000465278 TRAV3A0A0B4J244 114 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 IGHV1-3A0A0C4DH29 117 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 IBA57-AS1B1ANH7 110 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 C11orf94C9JXX5 98 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 PANO1I0J062 215 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 M0R378 163 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 DYNLT3P51808 116 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 SYNJ2BPP57105 145 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 HERVK_113P61574 105 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 SNRPD3P62318 126 aaKnown RBP3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 CACNG7P62955 275 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 PRCDQ00LT1 54 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 NSUN5P1Q3KNT7 163 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 FAM222AQ5U5X8 452 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 LCA10Q71F78 164 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 Q8N2B8 174 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 NPBQ8NG41 125 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 OR8A1Q8NGG7 326 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 NDUFA4L2Q9NRX3 87 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 ANAPC11Q9NYG5 84 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 ZNRD1Q9P1U0 126 aa3.29□□□□□ -1.88
CACNA1C-223ENST00000465278 TRBV20OR9-2A0A075B6H5 130 aa3.28□□□□□ -1.88
CACNA1C-223ENST00000465278 TRBV7-3A0A075B6L6 115 aa3.28□□□□□ -1.88
CACNA1C-223ENST00000465278 TRBV25-1A0A075B6N4 114 aa3.28□□□□□ -1.88
CACNA1C-223ENST00000465278 IGHV3OR16-9A0A0B4J2B5 98 aa3.28□□□□□ -1.88
CACNA1C-223ENST00000465278 E7EUB6 86 aa3.28□□□□□ -1.88
CACNA1C-223ENST00000465278 SAA1P0DJI8 122 aaPredicted RBP3.28□□□□□ -1.88
CACNA1C-223ENST00000465278 PSMB2P49721 201 aa3.28□□□□□ -1.88
CACNA1C-223ENST00000465278 KLKP1Q107X0 134 aa3.28□□□□□ -1.88
CACNA1C-223ENST00000465278 ATXN8Q156A1 80 aa3.28□□□□□ -1.88
CACNA1C-223ENST00000465278 ZNF56Q15929 161 aa3.28□□□□□ -1.88
CACNA1C-223ENST00000465278 Q5VSD8 79 aa3.28□□□□□ -1.88
CACNA1C-223ENST00000465278 VMO1Q7Z5L0 202 aa3.28□□□□□ -1.88
CACNA1C-223ENST00000465278 SLC25A29Q8N8R3 303 aa3.28□□□□□ -1.88
CACNA1C-223ENST00000465278 DAND5Q8N907 189 aa3.28□□□□□ -1.88
CACNA1C-223ENST00000465278 ZNF414Q96IQ9 312 aa3.28□□□□□ -1.88
CACNA1C-223ENST00000465278 TMEM243Q9BU79 118 aa3.28□□□□□ -1.88
CACNA1C-223ENST00000465278 C11orf68Q9H3H3 251 aaKnown RBP3.28□□□□□ -1.88
CACNA1C-223ENST00000465278 TP73-AS1Q9UF72 201 aa3.28□□□□□ -1.88
CACNA1C-223ENST00000465278 TRAV41A0A0B4J266 112 aa3.27□□□□□ -1.89
CACNA1C-223ENST00000465278 A0A0B4J2C4 111 aa3.27□□□□□ -1.89
CACNA1C-223ENST00000465278 C16orf90A8MZG2 172 aa3.27□□□□□ -1.89
CACNA1C-223ENST00000465278 ZNF73O43830 326 aaPredicted RBP3.27□□□□□ -1.89
CACNA1C-223ENST00000465278 ZNF861PO60384 105 aa3.27□□□□□ -1.89
CACNA1C-223ENST00000465278 TIMM17BO60830 172 aa3.27□□□□□ -1.89
CACNA1C-223ENST00000465278 CCKP06307 115 aa3.27□□□□□ -1.89
CACNA1C-223ENST00000465278 KRTAP12-2P59991 146 aa3.27□□□□□ -1.89
CACNA1C-223ENST00000465278 UBE2BP63146 152 aa3.27□□□□□ -1.89
CACNA1C-223ENST00000465278 KIAA0087Q14695 138 aa3.27□□□□□ -1.89
CACNA1C-223ENST00000465278 CLEC19AQ6UXS0 136 aa3.27□□□□□ -1.89
CACNA1C-223ENST00000465278 UNQ9165/PRO28630Q6UXU0 137 aa3.27□□□□□ -1.89
CACNA1C-223ENST00000465278 DYNAPQ8N1N2 210 aa3.27□□□□□ -1.89
CACNA1C-223ENST00000465278 Q8N8P6 123 aa3.27□□□□□ -1.89
CACNA1C-223ENST00000465278 CHCHD10Q8WYQ3 142 aaPredicted RBP3.27□□□□□ -1.89
CACNA1C-223ENST00000465278 SLC25A22Q9H936 323 aa3.27□□□□□ -1.89
CACNA1C-223ENST00000465278 PSENENQ9NZ42 101 aa3.27□□□□□ -1.89
CACNA1C-223ENST00000465278 LRP1Q07954 4544 aaKnown RBP3.27□□□□□ -1.89
CACNA1C-223ENST00000465278 SSPOA2VEC9 5147 aa3.26□□□□□ -1.89
CACNA1C-223ENST00000465278 K7ERJ3 54 aa3.26□□□□□ -1.89
CACNA1C-223ENST00000465278 RNASE2P10153 161 aaKnown RBP3.26□□□□□ -1.89
CACNA1C-223ENST00000465278 COX7A1P24310 79 aa3.26□□□□□ -1.89
CACNA1C-223ENST00000465278 CKS2P33552 79 aa3.26□□□□□ -1.89
CACNA1C-223ENST00000465278 ASB16-AS1Q495Z4 193 aa3.26□□□□□ -1.89
CACNA1C-223ENST00000465278 ATP5EP2Q5VTU8 51 aa3.26□□□□□ -1.89
CACNA1C-223ENST00000465278 C20orf203Q8NBC4 194 aa3.26□□□□□ -1.89
CACNA1C-223ENST00000465278 LINC00588Q9Y4M8 146 aa3.26□□□□□ -1.89
CACNA1C-223ENST00000465278 FAT3Q8TDW7 4589 aa3.26□□□□□ -1.89
CACNA1C-223ENST00000465278 TRAV8-3A0A0A6YYJ7 113 aa3.25□□□□□ -1.89
CACNA1C-223ENST00000465278 TRAV13-2A0A0B4J235 113 aa3.25□□□□□ -1.89
CACNA1C-223ENST00000465278 IGHV1-69DA0A0B4J2H0 117 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms