RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 BCE1O60756 84 aa8.56□□□□□ -1.04
MCF2L-220ENST00000464800 CKS1BP61024 79 aa8.56□□□□□ -1.04
MCF2L-220ENST00000464800 NDUFA5Q16718 116 aa8.56□□□□□ -1.04
MCF2L-220ENST00000464800 C6orf226Q5I0X4 101 aa8.56□□□□□ -1.04
MCF2L-220ENST00000464800 LINC00173Q6ZV60 143 aa8.56□□□□□ -1.04
MCF2L-220ENST00000464800 Q8N8P6 123 aa8.56□□□□□ -1.04
MCF2L-220ENST00000464800 AMELXQ99217 191 aa8.56□□□□□ -1.04
MCF2L-220ENST00000464800 VCX2Q9H322 139 aa8.56□□□□□ -1.04
MCF2L-220ENST00000464800 TOMM7Q9P0U1 55 aa8.56□□□□□ -1.04
MCF2L-220ENST00000464800 RETNLBQ9BQ08 111 aa8.55□□□□□ -1.04
MCF2L-220ENST00000464800 XAGE1AQ9HD64 81 aa8.55□□□□□ -1.04
MCF2L-220ENST00000464800 FAT4Q6V0I7 4981 aa8.54□□□□□ -1.04
MCF2L-220ENST00000464800 TMEM218A2RU14 115 aa8.54□□□□□ -1.04
MCF2L-220ENST00000464800 MRPL55Q7Z7F7 128 aaKnown RBP8.54□□□□□ -1.04
MCF2L-220ENST00000464800 CDIP1Q9H305 208 aa8.54□□□□□ -1.04
MCF2L-220ENST00000464800 TP73-AS1Q9UF72 201 aa8.54□□□□□ -1.04
MCF2L-220ENST00000464800 IGIPA6NJ69 53 aa8.53□□□□□ -1.04
MCF2L-220ENST00000464800 NPSP0C0P6 89 aa8.53□□□□□ -1.04
MCF2L-220ENST00000464800 ORMDL2Q53FV1 153 aa8.53□□□□□ -1.04
MCF2L-220ENST00000464800 FAM19A3Q7Z5A8 133 aa8.53□□□□□ -1.04
MCF2L-220ENST00000464800 Q8IZM0 81 aa8.53□□□□□ -1.04
MCF2L-220ENST00000464800 ALKBH7Q9BT30 221 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-220ENST00000464800 TPRXLQ17RH7 258 aa8.52□□□□□ -1.05
MCF2L-220ENST00000464800 SEC11CQ9BY50 192 aa8.52□□□□□ -1.05
MCF2L-220ENST00000464800 ADCYAP1P18509 176 aa8.51□□□□□ -1.05
MCF2L-220ENST00000464800 PNRC1Q12796 327 aaPredicted RBP8.51□□□□□ -1.05
MCF2L-220ENST00000464800 SLC7A5P1Q8MH63 180 aa8.51□□□□□ -1.05
MCF2L-220ENST00000464800 ANAPC11Q9NYG5 84 aa8.51□□□□□ -1.05
MCF2L-220ENST00000464800 CDKN2A-AS1Q9UH64 79 aa8.51□□□□□ -1.05
MCF2L-220ENST00000464800 F8VRH5 84 aa8.5□□□□□ -1.05
MCF2L-220ENST00000464800 K7EMI3 77 aa8.5□□□□□ -1.05
MCF2L-220ENST00000464800 MT-ND4LP03901 98 aa8.5□□□□□ -1.05
MCF2L-220ENST00000464800 HERVK_113P63121 156 aa8.5□□□□□ -1.05
MCF2L-220ENST00000464800 KRTAP13-2Q52LG2 175 aa8.5□□□□□ -1.05
MCF2L-220ENST00000464800 LINC00304Q8N9R0 145 aa8.5□□□□□ -1.05
MCF2L-220ENST00000464800 ANAPC16Q96DE5 110 aa8.5□□□□□ -1.05
MCF2L-220ENST00000464800 RPL37AP8A6NKH3 93 aa8.49□□□□□ -1.05
MCF2L-220ENST00000464800 SEC11AP67812 179 aa8.49□□□□□ -1.05
MCF2L-220ENST00000464800 GEMIN7Q9H840 131 aaKnown RBP8.49□□□□□ -1.05
MCF2L-220ENST00000464800 NXT2Q9NPJ8 142 aaKnown RBP8.49□□□□□ -1.05
MCF2L-220ENST00000464800 IGLV7-46A0A075B6I9 117 aa8.48□□□□□ -1.05
MCF2L-220ENST00000464800 FAM229BQ4G0N7 80 aa8.48□□□□□ -1.05
MCF2L-220ENST00000464800 PAPPA-AS1Q5QFB9 102 aa8.48□□□□□ -1.05
MCF2L-220ENST00000464800 G0S2P27469 103 aa8.47□□□□□ -1.05
MCF2L-220ENST00000464800 UBE2AP49459 152 aa8.47□□□□□ -1.05
MCF2L-220ENST00000464800 C10orf91Q5T1B1 145 aa8.47□□□□□ -1.05
MCF2L-220ENST00000464800 LINC00167Q96N53 147 aa8.47□□□□□ -1.05
MCF2L-220ENST00000464800 TIMM17AQ99595 171 aa8.47□□□□□ -1.05
MCF2L-220ENST00000464800 TOMM6Q96B49 74 aa8.46□□□□□ -1.06
MCF2L-220ENST00000464800 GAGE10A6NGK3 116 aa8.45□□□□□ -1.06
MCF2L-220ENST00000464800 APOC3P02656 99 aa8.45□□□□□ -1.06
MCF2L-220ENST00000464800 CXCL5P42830 114 aa8.45□□□□□ -1.06
MCF2L-220ENST00000464800 KRTAP13-1Q8IUC0 172 aa8.45□□□□□ -1.06
MCF2L-220ENST00000464800 IGKV2D-26A0A0A0MRZ7 120 aa8.44□□□□□ -1.06
MCF2L-220ENST00000464800 SMIM1B2RUZ4 78 aa8.44□□□□□ -1.06
MCF2L-220ENST00000464800 SVBPQ8N300 66 aa8.44□□□□□ -1.06
MCF2L-220ENST00000464800 SNAPINO95295 136 aa8.43□□□□□ -1.06
MCF2L-220ENST00000464800 CTAG1AP78358 180 aa8.43□□□□□ -1.06
MCF2L-220ENST00000464800 KIAA1644Q3SXP7 199 aa8.43□□□□□ -1.06
MCF2L-220ENST00000464800 PDZD11Q5EBL8 140 aa8.43□□□□□ -1.06
MCF2L-220ENST00000464800 ERASQ7Z444 233 aa8.43□□□□□ -1.06
MCF2L-220ENST00000464800 COX7B2Q8TF08 81 aa8.43□□□□□ -1.06
MCF2L-220ENST00000464800 SCGB3A1Q96QR1 104 aa8.43□□□□□ -1.06
MCF2L-220ENST00000464800 TINCRA0A1B0GVN0 87 aa8.42□□□□□ -1.06
MCF2L-220ENST00000464800 RHEBQ15382 184 aa8.42□□□□□ -1.06
MCF2L-220ENST00000464800 NKAPP1Q8N9T2 125 aa8.42□□□□□ -1.06
MCF2L-220ENST00000464800 IGLV5-37A0A075B6J1 123 aa8.41□□□□□ -1.06
MCF2L-220ENST00000464800 RAB5BP61020 215 aa8.41□□□□□ -1.06
MCF2L-220ENST00000464800 PPDPFQ9H3Y8 114 aa8.41□□□□□ -1.06
MCF2L-220ENST00000464800 MUC17Q685J3 4493 aa8.41□□□□□ -1.06
MCF2L-220ENST00000464800 IGLV5-45A0A087WSX0 123 aa8.4□□□□□ -1.06
MCF2L-220ENST00000464800 RPS10P5Q9NQ39 176 aa8.4□□□□□ -1.06
MCF2L-220ENST00000464800 CST9LQ9H4G1 147 aa8.39□□□□□ -1.07
MCF2L-220ENST00000464800 IGKV2-28A0A075B6P5 120 aa8.38□□□□□ -1.07
MCF2L-220ENST00000464800 IGKV2D-28P01615 120 aa8.38□□□□□ -1.07
MCF2L-220ENST00000464800 SPINK8P0C7L1 97 aa8.38□□□□□ -1.07
MCF2L-220ENST00000464800 PRLHP81277 87 aa8.38□□□□□ -1.07
MCF2L-220ENST00000464800 LINC01549A6NIU2 74 aa8.37□□□□□ -1.07
MCF2L-220ENST00000464800 ATP6V1G1O75348 118 aa8.37□□□□□ -1.07
MCF2L-220ENST00000464800 LINC01546A6NGU7 62 aa8.36□□□□□ -1.07
MCF2L-220ENST00000464800 SCO1O75880 301 aa8.36□□□□□ -1.07
MCF2L-220ENST00000464800 S100PP25815 95 aa8.36□□□□□ -1.07
MCF2L-220ENST00000464800 FAM19A1Q7Z5A9 133 aa8.36□□□□□ -1.07
MCF2L-220ENST00000464800 ATP5LO75964 103 aa8.35□□□□□ -1.07
MCF2L-220ENST00000464800 S100A1P23297 94 aa8.35□□□□□ -1.07
MCF2L-220ENST00000464800 LINC01547P58512 204 aaPredicted RBP8.35□□□□□ -1.07
MCF2L-220ENST00000464800 PMVKQ15126 192 aa8.35□□□□□ -1.07
MCF2L-220ENST00000464800 MRPL18Q9H0U6 180 aaKnown RBP8.35□□□□□ -1.07
MCF2L-220ENST00000464800 TRAV9-1A0A075B6T8 112 aa8.34□□□□□ -1.07
MCF2L-220ENST00000464800 LCE2DQ5TA82 110 aaPredicted RBP8.34□□□□□ -1.07
MCF2L-220ENST00000464800 FP248Q71RG6 208 aaPredicted RBP8.34□□□□□ -1.07
MCF2L-220ENST00000464800 C3orf22Q8N5N4 141 aa8.34□□□□□ -1.07
MCF2L-220ENST00000464800 GNB1LQ9BYB4 327 aa8.34□□□□□ -1.07
MCF2L-220ENST00000464800 H3BRM9 83 aa8.33□□□□□ -1.08
MCF2L-220ENST00000464800 PFN2P35080 140 aa8.33□□□□□ -1.08
MCF2L-220ENST00000464800 SPAG11AQ6PDA7 123 aa8.33□□□□□ -1.08
MCF2L-220ENST00000464800 LINC00337Q8N6G1 96 aa8.33□□□□□ -1.08
MCF2L-220ENST00000464800 TMEM126AQ9H061 195 aa8.33□□□□□ -1.08
MCF2L-220ENST00000464800 TMEM238C9JI98 176 aa8.32□□□□□ -1.08
MCF2L-220ENST00000464800 ASB16-AS1Q495Z4 193 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms