RNA–Protein interactions for RNA: ENST00000464526.1

LST1-220, leukocyte specific transcript 1, humanhuman

TSL 1 (best)

Gene LST1, Length 1,832 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-220ENST00000464526 PGPEP1Q9NXJ5 209 aa11.29□□□□□ -0.6
LST1-220ENST00000464526 FAM30AQ9NZY2 134 aa11.29□□□□□ -0.6
LST1-220ENST00000464526 FAT1Q14517 4588 aa11.29□□□□□ -0.6
LST1-220ENST00000464526 H3BRM9 83 aa11.28□□□□□ -0.6
LST1-220ENST00000464526 SYCNQ0VAF6 134 aa11.28□□□□□ -0.6
LST1-220ENST00000464526 C9orf116Q5BN46 136 aaPredicted RBP11.28□□□□□ -0.6
LST1-220ENST00000464526 CARD19Q96LW7 228 aa11.28□□□□□ -0.6
LST1-220ENST00000464526 C6orf48Q9UBA6 75 aa11.28□□□□□ -0.6
LST1-220ENST00000464526 PLNP26678 52 aa11.28□□□□□ -0.6
LST1-220ENST00000464526 Q8IZM0 81 aa11.28□□□□□ -0.6
LST1-220ENST00000464526 C9orf163Q8N9P6 203 aa11.28□□□□□ -0.6
LST1-220ENST00000464526 COX7B2Q8TF08 81 aa11.28□□□□□ -0.6
LST1-220ENST00000464526 GCSHP23434 173 aa11.27□□□□□ -0.61
LST1-220ENST00000464526 STPG4Q8N801 248 aa11.27□□□□□ -0.61
LST1-220ENST00000464526 CHTF8P0CG12 524 aa11.26□□□□□ -0.61
LST1-220ENST00000464526 CDPF1Q6NVV7 123 aa11.26□□□□□ -0.61
LST1-220ENST00000464526 C2orf48Q96LS8 159 aa11.26□□□□□ -0.61
LST1-220ENST00000464526 MAJINQ3KP22 176 aa11.25□□□□□ -0.61
LST1-220ENST00000464526 PRSS2P07478 247 aa11.24□□□□□ -0.61
LST1-220ENST00000464526 C6orf226Q5I0X4 101 aa11.24□□□□□ -0.61
LST1-220ENST00000464526 SDIM1Q6ZPB5 146 aa11.24□□□□□ -0.61
LST1-220ENST00000464526 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.24□□□□□ -0.61
LST1-220ENST00000464526 IGKV2D-26A0A0A0MRZ7 120 aa11.23□□□□□ -0.61
LST1-220ENST00000464526 NDUFA1O15239 70 aa11.23□□□□□ -0.61
LST1-220ENST00000464526 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.22□□□□□ -0.61
LST1-220ENST00000464526 ZNF625Q96I27 306 aaPredicted RBP11.22□□□□□ -0.61
LST1-220ENST00000464526 A0A096LNI7 61 aa11.21□□□□□ -0.61
LST1-220ENST00000464526 CKS1BP61024 79 aa11.21□□□□□ -0.61
LST1-220ENST00000464526 TTTY13Q9BZ97 58 aa11.21□□□□□ -0.61
LST1-220ENST00000464526 ANKRD39Q53RE8 183 aa11.21□□□□□ -0.62
LST1-220ENST00000464526 IGKV2-24A0A0C4DH68 120 aa11.2□□□□□ -0.62
LST1-220ENST00000464526 C20orf202A1L168 122 aa11.19□□□□□ -0.62
LST1-220ENST00000464526 Q6ZRP5 223 aa11.19□□□□□ -0.62
LST1-220ENST00000464526 Q6ZSA8 131 aa11.19□□□□□ -0.62
LST1-220ENST00000464526 KRTAP17-1Q9BYP8 105 aa11.18□□□□□ -0.62
LST1-220ENST00000464526 E9PLD3 99 aa11.17□□□□□ -0.62
LST1-220ENST00000464526 LEPROTO15243 131 aa11.17□□□□□ -0.62
LST1-220ENST00000464526 RPL18AQ02543 176 aaKnown RBP11.17□□□□□ -0.62
LST1-220ENST00000464526 SCGB1D1O95968 90 aa11.16□□□□□ -0.62
LST1-220ENST00000464526 TP73-AS1Q9UF72 201 aa11.16□□□□□ -0.62
LST1-220ENST00000464526 J3QQQ9 107 aa11.16□□□□□ -0.62
LST1-220ENST00000464526 XGP55808 180 aa11.16□□□□□ -0.62
LST1-220ENST00000464526 GAGE2BQ13066 116 aa11.16□□□□□ -0.62
LST1-220ENST00000464526 HERC2O95714 4834 aa11.15□□□□□ -0.62
LST1-220ENST00000464526 TRBV30A0A0K0K1B3 111 aa11.15□□□□□ -0.62
LST1-220ENST00000464526 CXCL5P42830 114 aa11.15□□□□□ -0.62
LST1-220ENST00000464526 NDUFA12Q9UI09 145 aa11.15□□□□□ -0.62
LST1-220ENST00000464526 HERVK_113P61574 105 aa11.14□□□□□ -0.63
LST1-220ENST00000464526 SCXQ7RTU7 201 aa11.14□□□□□ -0.63
LST1-220ENST00000464526 A0A0U1RRA0 63 aa11.14□□□□□ -0.63
LST1-220ENST00000464526 RNF151Q2KHN1 245 aa11.14□□□□□ -0.63
LST1-220ENST00000464526 GAGE2EQ4V326 116 aa11.14□□□□□ -0.63
LST1-220ENST00000464526 PYY3Q5JQD4 70 aa11.14□□□□□ -0.63
LST1-220ENST00000464526 SPACA4Q8TDM5 124 aa11.14□□□□□ -0.63
LST1-220ENST00000464526 GAGE2DQ9UEU5 116 aa11.14□□□□□ -0.63
LST1-220ENST00000464526 LOC107984640A0A0U1RRK4 108 aa11.13□□□□□ -0.63
LST1-220ENST00000464526 F8WDY8 70 aa11.13□□□□□ -0.63
LST1-220ENST00000464526 PFN2P35080 140 aa11.13□□□□□ -0.63
LST1-220ENST00000464526 PTTG1IPP53801 180 aa11.13□□□□□ -0.63
LST1-220ENST00000464526 FAM168BA1KXE4 195 aa11.12□□□□□ -0.63
LST1-220ENST00000464526 CIRBPQ14011 172 aaKnown RBP11.12□□□□□ -0.63
LST1-220ENST00000464526 PLEKHB2Q96CS7 222 aa11.12□□□□□ -0.63
LST1-220ENST00000464526 XAGE1AQ9HD64 81 aa11.12□□□□□ -0.63
LST1-220ENST00000464526 NDUFC2-KCTD14E9PQ53 114 aa11.12□□□□□ -0.63
LST1-220ENST00000464526 TLX1NBP0CAT3 122 aa11.12□□□□□ -0.63
LST1-220ENST00000464526 C9orf129Q5T035 196 aaKnown RBP11.12□□□□□ -0.63
LST1-220ENST00000464526 PCP2Q8IVA1 136 aa11.12□□□□□ -0.63
LST1-220ENST00000464526 CIRBP-AS1Q8TBR5 109 aa11.12□□□□□ -0.63
LST1-220ENST00000464526 VPS13BQ7Z7G8 4022 aa11.11□□□□□ -0.63
LST1-220ENST00000464526 LGALS3P17931 250 aaKnown RBP11.11□□□□□ -0.63
LST1-220ENST00000464526 NMUP48645 174 aa11.11□□□□□ -0.63
LST1-220ENST00000464526 JOSD1Q15040 202 aaPredicted RBP11.11□□□□□ -0.63
LST1-220ENST00000464526 KRTAP7-1Q8IUC3 87 aa11.11□□□□□ -0.63
LST1-220ENST00000464526 ERG28Q9UKR5 140 aa11.11□□□□□ -0.63
LST1-220ENST00000464526 A0A1W2PNN7 141 aa11.09□□□□□ -0.63
LST1-220ENST00000464526 A0A087WYN8 130 aa11.09□□□□□ -0.63
LST1-220ENST00000464526 SMIM13P0DJ93 91 aa11.09□□□□□ -0.63
LST1-220ENST00000464526 AKR1D1P51857 326 aa11.09□□□□□ -0.63
LST1-220ENST00000464526 DAND5Q8N907 189 aa11.09□□□□□ -0.63
LST1-220ENST00000464526 Q8NDZ9 215 aa11.08□□□□□ -0.64
LST1-220ENST00000464526 A0A0J9YXY3 114 aa11.06□□□□□ -0.64
LST1-220ENST00000464526 MYMXA0A1B0GTQ4 84 aa11.06□□□□□ -0.64
LST1-220ENST00000464526 ZNF815PA8K554 130 aa11.06□□□□□ -0.64
LST1-220ENST00000464526 SMR3BP02814 79 aaPredicted RBP11.06□□□□□ -0.64
LST1-220ENST00000464526 MEIG1Q5JSS6 88 aa11.05□□□□□ -0.64
LST1-220ENST00000464526 SERTAD4-AS1Q5TG53 156 aa11.05□□□□□ -0.64
LST1-220ENST00000464526 EIF4EBP3O60516 100 aaPredicted RBP11.05□□□□□ -0.64
LST1-220ENST00000464526 PAM16Q9Y3D7 125 aa11.05□□□□□ -0.64
LST1-220ENST00000464526 CDK2AP2O75956 126 aa11.04□□□□□ -0.64
LST1-220ENST00000464526 LINC00158P58513 81 aa11.04□□□□□ -0.64
LST1-220ENST00000464526 ADAMTSL4-AS1Q5T5F5 129 aa11.04□□□□□ -0.64
LST1-220ENST00000464526 FAM19A5Q7Z5A7 132 aaPredicted RBP11.04□□□□□ -0.64
LST1-220ENST00000464526 LITAFQ99732 161 aa11.04□□□□□ -0.64
LST1-220ENST00000464526 SND1-IT1Q9HBX3 110 aa11.04□□□□□ -0.64
LST1-220ENST00000464526 LOC105371267A0A1B0GV96 52 aa11.03□□□□□ -0.64
LST1-220ENST00000464526 MIR7-3HGQ8N6C7 128 aa11.03□□□□□ -0.64
LST1-220ENST00000464526 DPH3Q96FX2 82 aa11.03□□□□□ -0.64
LST1-220ENST00000464526 PLAC8Q9NZF1 115 aa11.03□□□□□ -0.64
LST1-220ENST00000464526 HERV-K104P63124 156 aa11.02□□□□□ -0.64
LST1-220ENST00000464526 SFTA2Q6UW10 78 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms