RNA–Protein interactions for RNA: ENST00000463601.1

TSC2-209, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-209ENST00000463601 TINCRA0A1B0GVN0 87 aa12.05□□□□□ -0.48
TSC2-209ENST00000463601 UNQ6190/PRO20217Q6UXQ8 127 aa12.05□□□□□ -0.48
TSC2-209ENST00000463601 IGLV5-45A0A087WSX0 123 aa12.04□□□□□ -0.48
TSC2-209ENST00000463601 PRR3P79522 188 aaKnown RBP12.04□□□□□ -0.48
TSC2-209ENST00000463601 GAGE2BQ13066 116 aa12.04□□□□□ -0.48
TSC2-209ENST00000463601 PDZD11Q5EBL8 140 aa12.04□□□□□ -0.48
TSC2-209ENST00000463601 C6orf48Q9UBA6 75 aa12.04□□□□□ -0.48
TSC2-209ENST00000463601 TRGC2P03986 189 aa12.03□□□□□ -0.48
TSC2-209ENST00000463601 C2orf82Q6UX34 121 aa12.03□□□□□ -0.48
TSC2-209ENST00000463601 COLCA2A8K830 154 aa12.02□□□□□ -0.49
TSC2-209ENST00000463601 RPL18AQ02543 176 aaKnown RBP12.02□□□□□ -0.49
TSC2-209ENST00000463601 Q8IZM0 81 aa12.02□□□□□ -0.49
TSC2-209ENST00000463601 LINC00469Q8N7U9 141 aa12.02□□□□□ -0.49
TSC2-209ENST00000463601 CHCHD1Q96BP2 118 aaKnown RBP12.02□□□□□ -0.49
TSC2-209ENST00000463601 PACRGQ96M98 296 aaPredicted RBP12.02□□□□□ -0.49
TSC2-209ENST00000463601 TLX1NBP0CAT3 122 aa12.01□□□□□ -0.49
TSC2-209ENST00000463601 TRBV30A0A0K0K1B3 111 aa12□□□□□ -0.49
TSC2-209ENST00000463601 SMIM1B2RUZ4 78 aa12□□□□□ -0.49
TSC2-209ENST00000463601 ATP5LO75964 103 aa12□□□□□ -0.49
TSC2-209ENST00000463601 PRSS2P07478 247 aa12□□□□□ -0.49
TSC2-209ENST00000463601 TOMM7Q9P0U1 55 aa12□□□□□ -0.49
TSC2-209ENST00000463601 IGLC3P0DOY3 106 aa11.99□□□□□ -0.49
TSC2-209ENST00000463601 C6orf226Q5I0X4 101 aa11.98□□□□□ -0.49
TSC2-209ENST00000463601 Q6ZRP5 223 aa11.98□□□□□ -0.49
TSC2-209ENST00000463601 A0A1W2PNN7 141 aa11.97□□□□□ -0.49
TSC2-209ENST00000463601 NDUFA6P56556 154 aa11.97□□□□□ -0.49
TSC2-209ENST00000463601 CKS1BP61024 79 aa11.97□□□□□ -0.49
TSC2-209ENST00000463601 ODF1Q14990 250 aa11.97□□□□□ -0.49
TSC2-209ENST00000463601 LRP2P98164 4655 aa11.96□□□□□ -0.49
TSC2-209ENST00000463601 BAGE3Q86Y29 109 aa11.96□□□□□ -0.49
TSC2-209ENST00000463601 C9orf116Q5BN46 136 aaPredicted RBP11.95□□□□□ -0.5
TSC2-209ENST00000463601 NDUFC2-KCTD14E9PQ53 114 aa11.94□□□□□ -0.5
TSC2-209ENST00000463601 HSBP1O75506 76 aa11.94□□□□□ -0.5
TSC2-209ENST00000463601 SCO1O75880 301 aa11.94□□□□□ -0.5
TSC2-209ENST00000463601 SPINK8P0C7L1 97 aa11.94□□□□□ -0.5
TSC2-209ENST00000463601 LINC00310P59036 64 aa11.94□□□□□ -0.5
TSC2-209ENST00000463601 LINC01600Q96MT4 127 aa11.94□□□□□ -0.5
TSC2-209ENST00000463601 F8VRH5 84 aa11.93□□□□□ -0.5
TSC2-209ENST00000463601 H3BRM9 83 aa11.93□□□□□ -0.5
TSC2-209ENST00000463601 CXCL5P42830 114 aa11.93□□□□□ -0.5
TSC2-209ENST00000463601 COX7B2Q8TF08 81 aa11.93□□□□□ -0.5
TSC2-209ENST00000463601 ZNF22P17026 224 aaPredicted RBP11.92□□□□□ -0.5
TSC2-209ENST00000463601 GAGE2EQ4V326 116 aa11.92□□□□□ -0.5
TSC2-209ENST00000463601 FAM19A2Q8N3H0 131 aa11.92□□□□□ -0.5
TSC2-209ENST00000463601 IFI27L1Q96BM0 104 aa11.92□□□□□ -0.5
TSC2-209ENST00000463601 GAGE2DQ9UEU5 116 aa11.92□□□□□ -0.5
TSC2-209ENST00000463601 SERF1AO75920 110 aa11.91□□□□□ -0.5
TSC2-209ENST00000463601 SRSF9Q13242 221 aaKnown RBP eCLIP11.91□□□□□ -0.5
TSC2-209ENST00000463601 IGLV5-39A0A0G2JS06 123 aa11.9□□□□□ -0.5
TSC2-209ENST00000463601 C11orf86A6NJI1 115 aa11.9□□□□□ -0.5
TSC2-209ENST00000463601 SPINK6Q6UWN8 80 aa11.9□□□□□ -0.5
TSC2-209ENST00000463601 TRAV12-1A0A0B4J245 112 aa11.89□□□□□ -0.51
TSC2-209ENST00000463601 FAM168BA1KXE4 195 aa11.89□□□□□ -0.51
TSC2-209ENST00000463601 CHTOPQ9Y3Y2 248 aaKnown RBP11.89□□□□□ -0.51
TSC2-209ENST00000463601 C9orf129Q5T035 196 aaKnown RBP11.88□□□□□ -0.51
TSC2-209ENST00000463601 KRTAP7-1Q8IUC3 87 aa11.88□□□□□ -0.51
TSC2-209ENST00000463601 NUPR1O60356 82 aa11.87□□□□□ -0.51
TSC2-209ENST00000463601 KRTAP10-8P60410 259 aa11.86□□□□□ -0.51
TSC2-209ENST00000463601 PHF5AQ7RTV0 110 aaKnown RBP11.86□□□□□ -0.51
TSC2-209ENST00000463601 RNF213Q63HN8 5207 aa11.86□□□□□ -0.51
TSC2-209ENST00000463601 TMEM170BQ5T4T1 132 aa11.85□□□□□ -0.51
TSC2-209ENST00000463601 FAM19A5Q7Z5A7 132 aaPredicted RBP11.85□□□□□ -0.51
TSC2-209ENST00000463601 LEPROTL1O95214 131 aa11.84□□□□□ -0.51
TSC2-209ENST00000463601 REG3GQ6UW15 175 aa11.84□□□□□ -0.51
TSC2-209ENST00000463601 PSORS1C2Q9UIG4 136 aa11.84□□□□□ -0.51
TSC2-209ENST00000463601 HIST1H2BKO60814 126 aa11.82□□□□□ -0.52
TSC2-209ENST00000463601 HIST1H2BJP06899 126 aa11.82□□□□□ -0.52
TSC2-209ENST00000463601 HIST1H2BOP23527 126 aa11.82□□□□□ -0.52
TSC2-209ENST00000463601 HIST1H2BBP33778 126 aa11.82□□□□□ -0.52
TSC2-209ENST00000463601 HIST1H2BDP58876 126 aa11.82□□□□□ -0.52
TSC2-209ENST00000463601 HIST1H2BCP62807 126 aa11.82□□□□□ -0.52
TSC2-209ENST00000463601 HIST2H2BEQ16778 126 aa11.82□□□□□ -0.52
TSC2-209ENST00000463601 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.82□□□□□ -0.52
TSC2-209ENST00000463601 HIST1H2BHQ93079 126 aa11.82□□□□□ -0.52
TSC2-209ENST00000463601 HIST1H2BNQ99877 126 aa11.82□□□□□ -0.52
TSC2-209ENST00000463601 HIST1H2BMQ99879 126 aa11.82□□□□□ -0.52
TSC2-209ENST00000463601 XAGE1AQ9HD64 81 aa11.82□□□□□ -0.52
TSC2-209ENST00000463601 TMEM223A0PJW6 202 aa11.8□□□□□ -0.52
TSC2-209ENST00000463601 M0QXV9 152 aa11.8□□□□□ -0.52
TSC2-209ENST00000463601 HSPB8Q9UJY1 196 aa11.8□□□□□ -0.52
TSC2-209ENST00000463601 KRTAP11-1Q8IUC1 163 aa11.79□□□□□ -0.52
TSC2-209ENST00000463601 H0Y8G0 127 aa11.78□□□□□ -0.52
TSC2-209ENST00000463601 FABP4P15090 132 aa11.78□□□□□ -0.52
TSC2-209ENST00000463601 C1orf137Q5JT78 98 aa11.78□□□□□ -0.52
TSC2-209ENST00000463601 SFTA2Q6UW10 78 aa11.77□□□□□ -0.53
TSC2-209ENST00000463601 ZNF625Q96I27 306 aaPredicted RBP11.77□□□□□ -0.53
TSC2-209ENST00000463601 ERG28Q9UKR5 140 aa11.75□□□□□ -0.53
TSC2-209ENST00000463601 PFN2P35080 140 aa11.74□□□□□ -0.53
TSC2-209ENST00000463601 C22orf24Q9Y442 160 aa11.74□□□□□ -0.53
TSC2-209ENST00000463601 PLNP26678 52 aa11.73□□□□□ -0.53
TSC2-209ENST00000463601 COX17Q14061 63 aa11.73□□□□□ -0.53
TSC2-209ENST00000463601 UBE2BP63146 152 aa11.72□□□□□ -0.53
TSC2-209ENST00000463601 TP73-AS1Q9UF72 201 aa11.72□□□□□ -0.53
TSC2-209ENST00000463601 IGLV7-43P04211 117 aa11.71□□□□□ -0.53
TSC2-209ENST00000463601 MAP1LC3CQ9BXW4 147 aa11.71□□□□□ -0.53
TSC2-209ENST00000463601 LPAP08519 4548 aa11.7□□□□□ -0.54
TSC2-209ENST00000463601 S100A1P23297 94 aa11.7□□□□□ -0.54
TSC2-209ENST00000463601 COA6Q5JTJ3 125 aaKnown RBP11.7□□□□□ -0.54
TSC2-209ENST00000463601 DPM2O94777 84 aa11.69□□□□□ -0.54
TSC2-209ENST00000463601 LBHQ53QV2 105 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms