RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 FAM223AQ8IWN6 122 aa6.22□□□□□ -1.41
SHQ1-203ENST00000463369 COPS9Q8WXC6 57 aa6.22□□□□□ -1.41
SHQ1-203ENST00000463369 FAM218AQ96MZ4 157 aa6.22□□□□□ -1.41
SHQ1-203ENST00000463369 CDK2AP2O75956 126 aa6.21□□□□□ -1.41
SHQ1-203ENST00000463369 PSMB8P28062 276 aa6.21□□□□□ -1.41
SHQ1-203ENST00000463369 PRIMA1Q86XR5 153 aa6.21□□□□□ -1.41
SHQ1-203ENST00000463369 TEP1Q99973 2627 aaKnown RBP6.21□□□□□ -1.42
SHQ1-203ENST00000463369 IGKV3D-7A0A0C4DH55 119 aa6.21□□□□□ -1.42
SHQ1-203ENST00000463369 TRBV12-3P01733 135 aa6.21□□□□□ -1.42
SHQ1-203ENST00000463369 SOSTDC1Q6X4U4 206 aa6.21□□□□□ -1.42
SHQ1-203ENST00000463369 USMG5Q96IX5 58 aa6.21□□□□□ -1.42
SHQ1-203ENST00000463369 CDKN2A-AS1Q9UH64 79 aa6.21□□□□□ -1.42
SHQ1-203ENST00000463369 RBMY1BA6NDE4 496 aaKnown RBP6.2□□□□□ -1.42
SHQ1-203ENST00000463369 RBMY1EA6NEQ0 496 aaKnown RBP6.2□□□□□ -1.42
SHQ1-203ENST00000463369 RBMY1DP0C7P1 496 aaKnown RBP6.2□□□□□ -1.42
SHQ1-203ENST00000463369 RBMY1A1P0DJD3 496 aaKnown RBP6.2□□□□□ -1.42
SHQ1-203ENST00000463369 C10orf99Q6UWK7 81 aa6.2□□□□□ -1.42
SHQ1-203ENST00000463369 LINC01006Q8NI28 216 aa6.2□□□□□ -1.42
SHQ1-203ENST00000463369 UBE2D4Q9Y2X8 147 aa6.2□□□□□ -1.42
SHQ1-203ENST00000463369 IGLV5-45A0A087WSX0 123 aa6.19□□□□□ -1.42
SHQ1-203ENST00000463369 DNAL4O96015 105 aa6.19□□□□□ -1.42
SHQ1-203ENST00000463369 SYNJ2BPP57105 145 aa6.19□□□□□ -1.42
SHQ1-203ENST00000463369 RHPN1-AS1Q9BWJ2 59 aa6.19□□□□□ -1.42
SHQ1-203ENST00000463369 C2CD3Q4AC94 2353 aa6.19□□□□□ -1.42
SHQ1-203ENST00000463369 IGHV1OR15-1A0A075B7D0 117 aa6.19□□□□□ -1.42
SHQ1-203ENST00000463369 A0A087WVE0 104 aa6.19□□□□□ -1.42
SHQ1-203ENST00000463369 CHCHD7Q9BUK0 85 aa6.19□□□□□ -1.42
SHQ1-203ENST00000463369 LINC00846Q9NV44 126 aa6.19□□□□□ -1.42
SHQ1-203ENST00000463369 IGLV5-39A0A0G2JS06 123 aa6.18□□□□□ -1.42
SHQ1-203ENST00000463369 OBSCN-AS1Q96MR7 158 aa6.18□□□□□ -1.42
SHQ1-203ENST00000463369 TRAV12-2A0A075B6T6 113 aa6.18□□□□□ -1.42
SHQ1-203ENST00000463369 C8orf87E5RJ46 101 aa6.18□□□□□ -1.42
SHQ1-203ENST00000463369 NDUFC2-KCTD14E9PQ53 114 aa6.18□□□□□ -1.42
SHQ1-203ENST00000463369 RPL28P46779 137 aaKnown RBP6.18□□□□□ -1.42
SHQ1-203ENST00000463369 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-203ENST00000463369 ZNF625Q96I27 306 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-203ENST00000463369 IGLV9-49A0A0B4J1Y8 123 aa6.17□□□□□ -1.42
SHQ1-203ENST00000463369 FHL2Q14192 279 aa6.17□□□□□ -1.42
SHQ1-203ENST00000463369 C9orf129Q5T035 196 aaKnown RBP6.17□□□□□ -1.42
SHQ1-203ENST00000463369 C14orf132Q9NPU4 83 aa6.17□□□□□ -1.42
SHQ1-203ENST00000463369 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.16□□□□□ -1.42
SHQ1-203ENST00000463369 IGKV2-29A2NJV5 120 aaPredicted RBP6.16□□□□□ -1.42
SHQ1-203ENST00000463369 NDUFC2O95298 119 aa6.16□□□□□ -1.42
SHQ1-203ENST00000463369 PROK1P58294 105 aa6.16□□□□□ -1.42
SHQ1-203ENST00000463369 COX6A2Q02221 97 aa6.16□□□□□ -1.42
SHQ1-203ENST00000463369 IGHV3-73A0A0B4J1V6 119 aa6.16□□□□□ -1.42
SHQ1-203ENST00000463369 IGHV3-11P01762 117 aa6.16□□□□□ -1.42
SHQ1-203ENST00000463369 PFN2P35080 140 aa6.16□□□□□ -1.42
SHQ1-203ENST00000463369 LINC00467Q9BRT7 94 aa6.16□□□□□ -1.42
SHQ1-203ENST00000463369 SETD2Q9BYW2 2564 aaPredicted RBP6.15□□□□□ -1.42
SHQ1-203ENST00000463369 WNK1Q9H4A3 2382 aa6.15□□□□□ -1.42
SHQ1-203ENST00000463369 TRAV13-2A0A0B4J235 113 aa6.15□□□□□ -1.42
SHQ1-203ENST00000463369 A0A0U1RQV1 116 aa6.15□□□□□ -1.42
SHQ1-203ENST00000463369 JMJD1CQ15652 2540 aa6.15□□□□□ -1.42
SHQ1-203ENST00000463369 IGKV3-20P01619 116 aa6.14□□□□□ -1.43
SHQ1-203ENST00000463369 IGHV4-28A0A0C4DH34 117 aa6.14□□□□□ -1.43
SHQ1-203ENST00000463369 C4orf3Q8WVX3 66 aa6.14□□□□□ -1.43
SHQ1-203ENST00000463369 IGHV3OR16-12A0A075B7B8 117 aa6.13□□□□□ -1.43
SHQ1-203ENST00000463369 A0A087WYN8 130 aa6.13□□□□□ -1.43
SHQ1-203ENST00000463369 EPM2AB3EWF7 344 aa6.13□□□□□ -1.43
SHQ1-203ENST00000463369 SPINK13Q1W4C9 94 aa6.13□□□□□ -1.43
SHQ1-203ENST00000463369 LINC00242Q5T6M2 205 aa6.13□□□□□ -1.43
SHQ1-203ENST00000463369 SMIM1B2RUZ4 78 aa6.13□□□□□ -1.43
SHQ1-203ENST00000463369 KRTAP10-3P60369 221 aa6.13□□□□□ -1.43
SHQ1-203ENST00000463369 Q6ZSN1 163 aa6.13□□□□□ -1.43
SHQ1-203ENST00000463369 C18orf65Q6ZTR6 163 aa6.13□□□□□ -1.43
SHQ1-203ENST00000463369 FAM19A3Q7Z5A8 133 aa6.13□□□□□ -1.43
SHQ1-203ENST00000463369 H0YGX0 51 aa6.12□□□□□ -1.43
SHQ1-203ENST00000463369 CRPP02741 224 aa6.12□□□□□ -1.43
SHQ1-203ENST00000463369 KRTAP24-1Q3LI83 254 aa6.11□□□□□ -1.43
SHQ1-203ENST00000463369 LINC00337Q8N6G1 96 aa6.11□□□□□ -1.43
SHQ1-203ENST00000463369 SMIM11BQ8TCY0 68 aa6.11□□□□□ -1.43
SHQ1-203ENST00000463369 TMEM243Q9BU79 118 aa6.11□□□□□ -1.43
SHQ1-203ENST00000463369 IGKV2-28A0A075B6P5 120 aa6.11□□□□□ -1.43
SHQ1-203ENST00000463369 NCR3O14931 201 aa6.11□□□□□ -1.43
SHQ1-203ENST00000463369 IGKV2D-28P01615 120 aa6.11□□□□□ -1.43
SHQ1-203ENST00000463369 CCKP06307 115 aa6.11□□□□□ -1.43
SHQ1-203ENST00000463369 RBMY1FQ15415 496 aaKnown RBP6.11□□□□□ -1.43
SHQ1-203ENST00000463369 FBN1P35555 2871 aaKnown RBP6.1□□□□□ -1.43
SHQ1-203ENST00000463369 IGHV3-38A0A0C4DH36 116 aa6.1□□□□□ -1.43
SHQ1-203ENST00000463369 KNCNA6PVL3 124 aa6.1□□□□□ -1.43
SHQ1-203ENST00000463369 SNRPD3P62318 126 aaKnown RBP6.1□□□□□ -1.43
SHQ1-203ENST00000463369 DEFB136Q30KP8 78 aa6.1□□□□□ -1.43
SHQ1-203ENST00000463369 ODF3L2Q3SX64 289 aa6.1□□□□□ -1.43
SHQ1-203ENST00000463369 S100A7L2Q5SY68 101 aa6.1□□□□□ -1.43
SHQ1-203ENST00000463369 SERP1Q9Y6X1 66 aa6.1□□□□□ -1.43
SHQ1-203ENST00000463369 PLAC8L1A1L4L8 177 aa6.1□□□□□ -1.43
SHQ1-203ENST00000463369 XCL1P47992 114 aa6.1□□□□□ -1.43
SHQ1-203ENST00000463369 ATP5EP2Q5VTU8 51 aa6.1□□□□□ -1.43
SHQ1-203ENST00000463369 XCL2Q9UBD3 114 aa6.1□□□□□ -1.43
SHQ1-203ENST00000463369 TENM1Q9UKZ4 2725 aa6.09□□□□□ -1.43
SHQ1-203ENST00000463369 ATRQ13535 2644 aa6.09□□□□□ -1.43
SHQ1-203ENST00000463369 TRAV23DV6A0A075B6W5 121 aa6.09□□□□□ -1.43
SHQ1-203ENST00000463369 IGHV4-30-4P0DP06 118 aa6.09□□□□□ -1.43
SHQ1-203ENST00000463369 LCE2AQ5TA79 106 aaPredicted RBP6.09□□□□□ -1.43
SHQ1-203ENST00000463369 LYPD5Q6UWN5 251 aa6.09□□□□□ -1.43
SHQ1-203ENST00000463369 C20orf197Q8N268 126 aa6.09□□□□□ -1.43
SHQ1-203ENST00000463369 SND1-IT1Q9HBX3 110 aa6.09□□□□□ -1.43
SHQ1-203ENST00000463369 K7EQG2 157 aa6.08□□□□□ -1.44
SHQ1-203ENST00000463369 LECT2O14960 151 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms