RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 FAM19A3Q7Z5A8 133 aa12.11□□□□□ -0.47
CPSF7-209ENST00000463244 VCX2Q9H322 139 aa12.11□□□□□ -0.47
CPSF7-209ENST00000463244 CYSLTR1Q9Y271 337 aa12.11□□□□□ -0.47
CPSF7-209ENST00000463244 LOC389332A0A1B0GUA5 103 aa12.1□□□□□ -0.47
CPSF7-209ENST00000463244 ANAPC11Q9NYG5 84 aa12.1□□□□□ -0.47
CPSF7-209ENST00000463244 F8VRH5 84 aa12.09□□□□□ -0.47
CPSF7-209ENST00000463244 NPSP0C0P6 89 aa12.09□□□□□ -0.47
CPSF7-209ENST00000463244 SRSF3P84103 164 aaKnown RBP12.09□□□□□ -0.47
CPSF7-209ENST00000463244 KRTAP13-2Q52LG2 175 aa12.09□□□□□ -0.47
CPSF7-209ENST00000463244 RETNLBQ9BQ08 111 aa12.09□□□□□ -0.47
CPSF7-209ENST00000463244 LAMTOR2Q9Y2Q5 125 aa12.09□□□□□ -0.47
CPSF7-209ENST00000463244 LINC00167Q96N53 147 aa12.08□□□□□ -0.48
CPSF7-209ENST00000463244 MAP1LC3AQ9H492 121 aa12.08□□□□□ -0.48
CPSF7-209ENST00000463244 IGIPA6NJ69 53 aa12.07□□□□□ -0.48
CPSF7-209ENST00000463244 RPL37AP8A6NKH3 93 aa12.07□□□□□ -0.48
CPSF7-209ENST00000463244 Q8N8P6 123 aa12.07□□□□□ -0.48
CPSF7-209ENST00000463244 CDKN2A-AS1Q9UH64 79 aa12.07□□□□□ -0.48
CPSF7-209ENST00000463244 HERVK_113P63121 156 aa12.06□□□□□ -0.48
CPSF7-209ENST00000463244 PEA15Q15121 130 aa12.05□□□□□ -0.48
CPSF7-209ENST00000463244 TPRXLQ17RH7 258 aa12.05□□□□□ -0.48
CPSF7-209ENST00000463244 ORMDL2Q53FV1 153 aa12.05□□□□□ -0.48
CPSF7-209ENST00000463244 KRTAP13-1Q8IUC0 172 aa12.05□□□□□ -0.48
CPSF7-209ENST00000463244 CXCL5P42830 114 aa12.04□□□□□ -0.48
CPSF7-209ENST00000463244 SEC11AP67812 179 aa12.04□□□□□ -0.48
CPSF7-209ENST00000463244 LINC00304Q8N9R0 145 aa12.04□□□□□ -0.48
CPSF7-209ENST00000463244 CDIP1Q9H305 208 aa12.04□□□□□ -0.48
CPSF7-209ENST00000463244 FAM229BQ4G0N7 80 aa12.03□□□□□ -0.48
CPSF7-209ENST00000463244 hCG_2014768A0A024R1R8 64 aa12.02□□□□□ -0.49
CPSF7-209ENST00000463244 GEMIN7Q9H840 131 aaKnown RBP12.02□□□□□ -0.49
CPSF7-209ENST00000463244 GAGE10A6NGK3 116 aa12.01□□□□□ -0.49
CPSF7-209ENST00000463244 K7EMI3 77 aa12.01□□□□□ -0.49
CPSF7-209ENST00000463244 IGLV5-37A0A075B6J1 123 aa12□□□□□ -0.49
CPSF7-209ENST00000463244 UBE2AP49459 152 aa12□□□□□ -0.49
CPSF7-209ENST00000463244 PAPPA-AS1Q5QFB9 102 aa12□□□□□ -0.49
CPSF7-209ENST00000463244 IGLV7-46A0A075B6I9 117 aa11.98□□□□□ -0.49
CPSF7-209ENST00000463244 SMIM1B2RUZ4 78 aa11.98□□□□□ -0.49
CPSF7-209ENST00000463244 PNRC1Q12796 327 aaPredicted RBP11.98□□□□□ -0.49
CPSF7-209ENST00000463244 TIMM17AQ99595 171 aa11.98□□□□□ -0.49
CPSF7-209ENST00000463244 CTAG1AP78358 180 aa11.96□□□□□ -0.49
CPSF7-209ENST00000463244 PDZD11Q5EBL8 140 aa11.96□□□□□ -0.49
CPSF7-209ENST00000463244 NKAPP1Q8N9T2 125 aa11.96□□□□□ -0.49
CPSF7-209ENST00000463244 COX7B2Q8TF08 81 aa11.96□□□□□ -0.49
CPSF7-209ENST00000463244 NXT2Q9NPJ8 142 aaKnown RBP11.96□□□□□ -0.49
CPSF7-209ENST00000463244 IGKV2D-26A0A0A0MRZ7 120 aa11.95□□□□□ -0.5
CPSF7-209ENST00000463244 TOMM6Q96B49 74 aa11.94□□□□□ -0.5
CPSF7-209ENST00000463244 IGKV2-28A0A075B6P5 120 aa11.93□□□□□ -0.5
CPSF7-209ENST00000463244 IGKV2D-28P01615 120 aa11.93□□□□□ -0.5
CPSF7-209ENST00000463244 G0S2P27469 103 aa11.93□□□□□ -0.5
CPSF7-209ENST00000463244 RAB5BP61020 215 aa11.93□□□□□ -0.5
CPSF7-209ENST00000463244 IGLV5-45A0A087WSX0 123 aa11.92□□□□□ -0.5
CPSF7-209ENST00000463244 TINCRA0A1B0GVN0 87 aa11.92□□□□□ -0.5
CPSF7-209ENST00000463244 SCO1O75880 301 aa11.92□□□□□ -0.5
CPSF7-209ENST00000463244 PRLHP81277 87 aa11.91□□□□□ -0.5
CPSF7-209ENST00000463244 ERASQ7Z444 233 aa11.9□□□□□ -0.5
CPSF7-209ENST00000463244 PPDPFQ9H3Y8 114 aa11.9□□□□□ -0.5
CPSF7-209ENST00000463244 ANAPC16Q96DE5 110 aa11.88□□□□□ -0.51
CPSF7-209ENST00000463244 SCGB3A1Q96QR1 104 aa11.88□□□□□ -0.51
CPSF7-209ENST00000463244 SPINK8P0C7L1 97 aa11.87□□□□□ -0.51
CPSF7-209ENST00000463244 ADCYAP1P18509 176 aa11.87□□□□□ -0.51
CPSF7-209ENST00000463244 FAM19A1Q7Z5A9 133 aa11.87□□□□□ -0.51
CPSF7-209ENST00000463244 TMEM126AQ9H061 195 aa11.87□□□□□ -0.51
CPSF7-209ENST00000463244 MT-ND4LP03901 98 aa11.86□□□□□ -0.51
CPSF7-209ENST00000463244 TMEM238C9JI98 176 aa11.85□□□□□ -0.51
CPSF7-209ENST00000463244 C3orf22Q8N5N4 141 aa11.85□□□□□ -0.51
CPSF7-209ENST00000463244 PLEKHB2Q96CS7 222 aa11.85□□□□□ -0.51
CPSF7-209ENST00000463244 VPREB1P12018 145 aa11.84□□□□□ -0.51
CPSF7-209ENST00000463244 CST9LQ9H4G1 147 aa11.84□□□□□ -0.51
CPSF7-209ENST00000463244 ATP5LO75964 103 aa11.83□□□□□ -0.52
CPSF7-209ENST00000463244 M0R378 163 aa11.82□□□□□ -0.52
CPSF7-209ENST00000463244 MRPL18Q9H0U6 180 aaKnown RBP11.82□□□□□ -0.52
CPSF7-209ENST00000463244 PFN2P35080 140 aa11.81□□□□□ -0.52
CPSF7-209ENST00000463244 KIAA1644Q3SXP7 199 aa11.81□□□□□ -0.52
CPSF7-209ENST00000463244 SPAG11AQ6PDA7 123 aa11.81□□□□□ -0.52
CPSF7-209ENST00000463244 FP248Q71RG6 208 aaPredicted RBP11.8□□□□□ -0.52
CPSF7-209ENST00000463244 CBLN2Q8IUK8 224 aa11.8□□□□□ -0.52
CPSF7-209ENST00000463244 SND1-IT1Q9HBX3 110 aa11.8□□□□□ -0.52
CPSF7-209ENST00000463244 LINC01549A6NIU2 74 aa11.79□□□□□ -0.52
CPSF7-209ENST00000463244 H3BRM9 83 aa11.79□□□□□ -0.52
CPSF7-209ENST00000463244 PMVKQ15126 192 aa11.79□□□□□ -0.52
CPSF7-209ENST00000463244 GNB1LQ9BYB4 327 aa11.79□□□□□ -0.52
CPSF7-209ENST00000463244 LINC01546A6NGU7 62 aa11.78□□□□□ -0.52
CPSF7-209ENST00000463244 IGLV5-39A0A0G2JS06 123 aa11.77□□□□□ -0.53
CPSF7-209ENST00000463244 RPL24P83731 157 aaKnown RBP11.77□□□□□ -0.53
CPSF7-209ENST00000463244 HIGD2AQ9BW72 106 aa11.77□□□□□ -0.53
CPSF7-209ENST00000463244 KRTAP13-3Q3SY46 172 aa11.76□□□□□ -0.53
CPSF7-209ENST00000463244 ASB16-AS1Q495Z4 193 aa11.76□□□□□ -0.53
CPSF7-209ENST00000463244 LINC00337Q8N6G1 96 aa11.76□□□□□ -0.53
CPSF7-209ENST00000463244 Q8NDZ9 215 aa11.76□□□□□ -0.53
CPSF7-209ENST00000463244 ERG28Q9UKR5 140 aa11.76□□□□□ -0.53
CPSF7-209ENST00000463244 COX17Q14061 63 aa11.75□□□□□ -0.53
CPSF7-209ENST00000463244 LINC01547P58512 204 aaPredicted RBP11.74□□□□□ -0.53
CPSF7-209ENST00000463244 RAB14P61106 215 aa11.74□□□□□ -0.53
CPSF7-209ENST00000463244 LCE2DQ5TA82 110 aaPredicted RBP11.74□□□□□ -0.53
CPSF7-209ENST00000463244 SPRR4Q96PI1 79 aa11.74□□□□□ -0.53
CPSF7-209ENST00000463244 A0A1B0GVG6 124 aa11.73□□□□□ -0.53
CPSF7-209ENST00000463244 IGLC3P0DOY3 106 aa11.73□□□□□ -0.53
CPSF7-209ENST00000463244 C4orf48Q5BLP8 95 aa11.72□□□□□ -0.53
CPSF7-209ENST00000463244 KRTAP4-1Q9BYQ7 146 aa11.71□□□□□ -0.53
CPSF7-209ENST00000463244 FSIP2Q5CZC0 6907 aa11.7□□□□□ -0.54
CPSF7-209ENST00000463244 ZNF625Q96I27 306 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms