RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 REG3AQ06141 175 aa5.17□□□□□ -1.58
GARNL3-212ENST00000463005 SS18Q15532 418 aa5.17□□□□□ -1.58
GARNL3-212ENST00000463005 Q6ZRU5 148 aa5.17□□□□□ -1.58
GARNL3-212ENST00000463005 HIST3H2BBQ8N257 126 aa5.17□□□□□ -1.58
GARNL3-212ENST00000463005 UBE2WQ96B02 151 aa5.17□□□□□ -1.58
GARNL3-212ENST00000463005 PACRGQ96M98 296 aaPredicted RBP5.17□□□□□ -1.58
GARNL3-212ENST00000463005 CSDC2Q9Y534 153 aaKnown RBP5.17□□□□□ -1.58
GARNL3-212ENST00000463005 IGLV4-60A0A075B6I1 120 aa5.16□□□□□ -1.58
GARNL3-212ENST00000463005 A0A096LNJ9 63 aa5.16□□□□□ -1.58
GARNL3-212ENST00000463005 TRAV13-1A0A0B4J241 112 aa5.16□□□□□ -1.58
GARNL3-212ENST00000463005 IGLV5-39A0A0G2JS06 123 aa5.16□□□□□ -1.58
GARNL3-212ENST00000463005 C5orf52A6NGY3 159 aa5.16□□□□□ -1.58
GARNL3-212ENST00000463005 SEC11AP67812 179 aa5.16□□□□□ -1.58
GARNL3-212ENST00000463005 PMVKQ15126 192 aa5.16□□□□□ -1.58
GARNL3-212ENST00000463005 C14orf177Q52M58 125 aa5.16□□□□□ -1.58
GARNL3-212ENST00000463005 LINC00269Q8N2A0 174 aa5.16□□□□□ -1.58
GARNL3-212ENST00000463005 OPRPNQ99935 248 aaPredicted RBP5.16□□□□□ -1.58
GARNL3-212ENST00000463005 GEMIN7Q9H840 131 aaKnown RBP5.16□□□□□ -1.58
GARNL3-212ENST00000463005 CDC42SE2Q9NRR3 84 aa5.16□□□□□ -1.58
GARNL3-212ENST00000463005 IGKV2D-24A0A075B6R9 120 aa5.15□□□□□ -1.59
GARNL3-212ENST00000463005 IGIPA6NJ69 53 aa5.15□□□□□ -1.59
GARNL3-212ENST00000463005 MT1HL1P0DM35 61 aa5.15□□□□□ -1.59
GARNL3-212ENST00000463005 MIAQ16674 131 aa5.15□□□□□ -1.59
GARNL3-212ENST00000463005 CHTOPQ9Y3Y2 248 aaKnown RBP5.15□□□□□ -1.59
GARNL3-212ENST00000463005 IGLV10-54A0A075B6I4 117 aa5.14□□□□□ -1.59
GARNL3-212ENST00000463005 TRAV8-4A0A0B4J246 113 aa5.14□□□□□ -1.59
GARNL3-212ENST00000463005 CCL25O15444 150 aa5.14□□□□□ -1.59
GARNL3-212ENST00000463005 AKR1D1P51857 326 aa5.14□□□□□ -1.59
GARNL3-212ENST00000463005 HNRNPA3P51991 378 aaKnown RBP5.14□□□□□ -1.59
GARNL3-212ENST00000463005 HIST1H2BLQ99880 126 aa5.14□□□□□ -1.59
GARNL3-212ENST00000463005 TRAV12-1A0A0B4J245 112 aa5.13□□□□□ -1.59
GARNL3-212ENST00000463005 SYS1-DBNDD2H3BUS1 97 aa5.13□□□□□ -1.59
GARNL3-212ENST00000463005 XCL1P47992 114 aa5.13□□□□□ -1.59
GARNL3-212ENST00000463005 HERVK_113P63121 156 aa5.13□□□□□ -1.59
GARNL3-212ENST00000463005 PET117Q6UWS5 81 aa5.13□□□□□ -1.59
GARNL3-212ENST00000463005 LINC00173Q6ZV60 143 aa5.13□□□□□ -1.59
GARNL3-212ENST00000463005 OR10D4PQ8NGN7 298 aa5.13□□□□□ -1.59
GARNL3-212ENST00000463005 LINC00959A0A1B0GUT2 108 aa5.12□□□□□ -1.59
GARNL3-212ENST00000463005 F8VRH5 84 aa5.12□□□□□ -1.59
GARNL3-212ENST00000463005 H3BRM9 83 aa5.12□□□□□ -1.59
GARNL3-212ENST00000463005 C3orf79P0CE67 100 aa5.12□□□□□ -1.59
GARNL3-212ENST00000463005 PLNP26678 52 aa5.12□□□□□ -1.59
GARNL3-212ENST00000463005 TMEM170BQ5T4T1 132 aa5.12□□□□□ -1.59
GARNL3-212ENST00000463005 ZC2HC1BQ5TFG8 222 aa5.12□□□□□ -1.59
GARNL3-212ENST00000463005 LINC00469Q8N7U9 141 aa5.12□□□□□ -1.59
GARNL3-212ENST00000463005 CHCHD10Q8WYQ3 142 aaPredicted RBP5.12□□□□□ -1.59
GARNL3-212ENST00000463005 AMELXQ99217 191 aa5.12□□□□□ -1.59
GARNL3-212ENST00000463005 CST9LQ9H4G1 147 aa5.12□□□□□ -1.59
GARNL3-212ENST00000463005 A0A0J9YXV3 536 aa5.11□□□□□ -1.59
GARNL3-212ENST00000463005 HSBP1L1C9JCN9 74 aa5.11□□□□□ -1.59
GARNL3-212ENST00000463005 DPM2O94777 84 aa5.11□□□□□ -1.59
GARNL3-212ENST00000463005 APOMO95445 188 aa5.11□□□□□ -1.59
GARNL3-212ENST00000463005 IGKCP01834 107 aa5.11□□□□□ -1.59
GARNL3-212ENST00000463005 UBE2D1P51668 147 aa5.11□□□□□ -1.59
GARNL3-212ENST00000463005 HERVK_113P61574 105 aa5.11□□□□□ -1.59
GARNL3-212ENST00000463005 ENHOQ6UWT2 76 aa5.11□□□□□ -1.59
GARNL3-212ENST00000463005 C9orf163Q8N9P6 203 aa5.11□□□□□ -1.59
GARNL3-212ENST00000463005 PRR34Q9NV39 138 aa5.11□□□□□ -1.59
GARNL3-212ENST00000463005 TINCRA0A1B0GVN0 87 aa5.1□□□□□ -1.59
GARNL3-212ENST00000463005 hDV102S1A0JD36 115 aa5.1□□□□□ -1.59
GARNL3-212ENST00000463005 COX7A2LO14548 114 aa5.1□□□□□ -1.59
GARNL3-212ENST00000463005 CD164L2Q6UWJ8 174 aa5.1□□□□□ -1.59
GARNL3-212ENST00000463005 MPLKIPQ8TAP9 179 aa5.1□□□□□ -1.59
GARNL3-212ENST00000463005 PMCHL2Q9BQD1 86 aa5.1□□□□□ -1.59
GARNL3-212ENST00000463005 KRTAP4-9Q9BYQ8 210 aa5.1□□□□□ -1.59
GARNL3-212ENST00000463005 MRPL35Q9NZE8 188 aaKnown RBP5.1□□□□□ -1.59
GARNL3-212ENST00000463005 PKHD1L1Q86WI1 4243 aa5.1□□□□□ -1.59
GARNL3-212ENST00000463005 PRSS2P07478 247 aa5.09□□□□□ -1.59
GARNL3-212ENST00000463005 IGLC3P0DOY3 106 aa5.09□□□□□ -1.59
GARNL3-212ENST00000463005 LINC00242Q5T6M2 205 aa5.09□□□□□ -1.59
GARNL3-212ENST00000463005 LINC01545Q5VT33 79 aa5.09□□□□□ -1.59
GARNL3-212ENST00000463005 C5orf38Q86SI9 138 aa5.09□□□□□ -1.59
GARNL3-212ENST00000463005 KRTAP4-7Q9BYR0 210 aa5.09□□□□□ -1.59
GARNL3-212ENST00000463005 LRP2P98164 4655 aa5.08□□□□□ -1.6
GARNL3-212ENST00000463005 C11orf86A6NJI1 115 aa5.08□□□□□ -1.6
GARNL3-212ENST00000463005 SDIM1Q6ZPB5 146 aa5.08□□□□□ -1.6
GARNL3-212ENST00000463005 PRR26Q8N8Z3 221 aa5.08□□□□□ -1.6
GARNL3-212ENST00000463005 TOMM7Q9P0U1 55 aa5.08□□□□□ -1.6
GARNL3-212ENST00000463005 IGLV4-69A0A075B6H9 119 aa5.07□□□□□ -1.6
GARNL3-212ENST00000463005 IGHV3-64A0A075B6Q5 118 aa5.07□□□□□ -1.6
GARNL3-212ENST00000463005 IGHV1-58A0A0C4DH39 117 aa5.07□□□□□ -1.6
GARNL3-212ENST00000463005 SPINK8P0C7L1 97 aa5.07□□□□□ -1.6
GARNL3-212ENST00000463005 ZNF22P17026 224 aaPredicted RBP5.07□□□□□ -1.6
GARNL3-212ENST00000463005 FAM19A3Q7Z5A8 133 aa5.07□□□□□ -1.6
GARNL3-212ENST00000463005 ATOH7Q8N100 152 aa5.07□□□□□ -1.6
GARNL3-212ENST00000463005 ORAOV1Q8WV07 137 aa5.07□□□□□ -1.6
GARNL3-212ENST00000463005 FAM104AQ969W3 186 aa5.07□□□□□ -1.6
GARNL3-212ENST00000463005 LINC01600Q96MT4 127 aa5.07□□□□□ -1.6
GARNL3-212ENST00000463005 CDKN2A-AS1Q9UH64 79 aa5.07□□□□□ -1.6
GARNL3-212ENST00000463005 S100A12P80511 92 aa5.06□□□□□ -1.6
GARNL3-212ENST00000463005 COX6A2Q02221 97 aa5.06□□□□□ -1.6
GARNL3-212ENST00000463005 CIRBPQ14011 172 aaKnown RBP5.06□□□□□ -1.6
GARNL3-212ENST00000463005 DPH3Q96FX2 82 aa5.06□□□□□ -1.6
GARNL3-212ENST00000463005 A0A087WZ39 114 aa5.05□□□□□ -1.6
GARNL3-212ENST00000463005 IGHV3OR16-9A0A0B4J2B5 98 aa5.05□□□□□ -1.6
GARNL3-212ENST00000463005 LGALS3P17931 250 aaKnown RBP5.05□□□□□ -1.6
GARNL3-212ENST00000463005 CKS1BP61024 79 aa5.05□□□□□ -1.6
GARNL3-212ENST00000463005 SPAG11BQ08648 103 aa5.05□□□□□ -1.6
GARNL3-212ENST00000463005 JOSD1Q15040 202 aaPredicted RBP5.05□□□□□ -1.6
GARNL3-212ENST00000463005 LINC01561Q8N1V8 128 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms