RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	C10orf25	Q5T742	122 aa		6.11	□□□□□ -1.43
PSMD4-208	ENST00000462970	TINCR	A0A1B0GVN0	87 aa		6.1	□□□□□ -1.43
PSMD4-208	ENST00000462970	COLCA2	A8K830	154 aa		6.1	□□□□□ -1.43
PSMD4-208	ENST00000462970	HSBP1	O75506	76 aa		6.1	□□□□□ -1.43
PSMD4-208	ENST00000462970	ATP5L	O75964	103 aa		6.1	□□□□□ -1.43
PSMD4-208	ENST00000462970	SPINK8	P0C7L1	97 aa		6.1	□□□□□ -1.43
PSMD4-208	ENST00000462970	PTTG1IP	P53801	180 aa		6.1	□□□□□ -1.43
PSMD4-208	ENST00000462970	CIRBP	Q14011	172 aa	Known RBP	6.1	□□□□□ -1.43
PSMD4-208	ENST00000462970	PDZD11	Q5EBL8	140 aa		6.1	□□□□□ -1.43
PSMD4-208	ENST00000462970	FAM19A3	Q7Z5A8	133 aa		6.1	□□□□□ -1.43
PSMD4-208	ENST00000462970	CHCHD1	Q96BP2	118 aa	Known RBP	6.1	□□□□□ -1.43
PSMD4-208	ENST00000462970	LINC00474	Q9P2X8	69 aa		6.1	□□□□□ -1.43
PSMD4-208	ENST00000462970	FAT1	Q14517	4588 aa		6.1	□□□□□ -1.43
PSMD4-208	ENST00000462970	VPS13B	Q7Z7G8	4022 aa		6.09	□□□□□ -1.43
PSMD4-208	ENST00000462970		F8WDY8	70 aa		6.09	□□□□□ -1.43
PSMD4-208	ENST00000462970	KIAA0087	Q14695	138 aa		6.09	□□□□□ -1.43
PSMD4-208	ENST00000462970	LINC01561	Q8N1V8	128 aa		6.09	□□□□□ -1.43
PSMD4-208	ENST00000462970	FAM19A2	Q8N3H0	131 aa		6.09	□□□□□ -1.43
PSMD4-208	ENST00000462970	C7orf33	Q8WU49	177 aa		6.09	□□□□□ -1.43
PSMD4-208	ENST00000462970	MRPL35	Q9NZE8	188 aa	Known RBP	6.09	□□□□□ -1.43
PSMD4-208	ENST00000462970	PLAC8	Q9NZF1	115 aa		6.09	□□□□□ -1.43
PSMD4-208	ENST00000462970	C6orf48	Q9UBA6	75 aa		6.09	□□□□□ -1.43
PSMD4-208	ENST00000462970		H0Y8G0	127 aa		6.08	□□□□□ -1.44
PSMD4-208	ENST00000462970		H3BRM9	83 aa		6.08	□□□□□ -1.44
PSMD4-208	ENST00000462970	SERF1A	O75920	110 aa		6.08	□□□□□ -1.44
PSMD4-208	ENST00000462970	RNF151	Q2KHN1	245 aa		6.08	□□□□□ -1.44
PSMD4-208	ENST00000462970	GAGE2E	Q4V326	116 aa		6.08	□□□□□ -1.44
PSMD4-208	ENST00000462970	C9orf116	Q5BN46	136 aa	Predicted RBP	6.08	□□□□□ -1.44
PSMD4-208	ENST00000462970	COX7B2	Q8TF08	81 aa		6.08	□□□□□ -1.44
PSMD4-208	ENST00000462970	GAGE2D	Q9UEU5	116 aa		6.08	□□□□□ -1.44
PSMD4-208	ENST00000462970	SMIM1	B2RUZ4	78 aa		6.07	□□□□□ -1.44
PSMD4-208	ENST00000462970		Q8IZM0	81 aa		6.07	□□□□□ -1.44
PSMD4-208	ENST00000462970	IFI27L1	Q96BM0	104 aa		6.07	□□□□□ -1.44
PSMD4-208	ENST00000462970	CHTOP	Q9Y3Y2	248 aa	Known RBP	6.07	□□□□□ -1.44
PSMD4-208	ENST00000462970	TRBV30	A0A0K0K1B3	111 aa		6.06	□□□□□ -1.44
PSMD4-208	ENST00000462970	IGLC3	P0DOY3	106 aa		6.06	□□□□□ -1.44
PSMD4-208	ENST00000462970	ANKRD39	Q53RE8	183 aa		6.06	□□□□□ -1.44
PSMD4-208	ENST00000462970	TMEM170B	Q5T4T1	132 aa		6.06	□□□□□ -1.44
PSMD4-208	ENST00000462970	IGLV5-45	A0A087WSX0	123 aa		6.05	□□□□□ -1.44
PSMD4-208	ENST00000462970	LOC105371267	A0A1B0GV96	52 aa		6.05	□□□□□ -1.44
PSMD4-208	ENST00000462970	C11orf86	A6NJI1	115 aa		6.05	□□□□□ -1.44
PSMD4-208	ENST00000462970	FABP4	P15090	132 aa		6.05	□□□□□ -1.44
PSMD4-208	ENST00000462970	ZNF22	P17026	224 aa	Predicted RBP	6.05	□□□□□ -1.44
PSMD4-208	ENST00000462970		Q6ZRP5	223 aa		6.05	□□□□□ -1.44
PSMD4-208	ENST00000462970	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	6.05	□□□□□ -1.44
PSMD4-208	ENST00000462970		A0A1W2PNN7	141 aa		6.04	□□□□□ -1.44
PSMD4-208	ENST00000462970	FAM168B	A1KXE4	195 aa		6.04	□□□□□ -1.44
PSMD4-208	ENST00000462970	NDUFC2-KCTD14	E9PQ53	114 aa		6.04	□□□□□ -1.44
PSMD4-208	ENST00000462970		F8VRH5	84 aa		6.04	□□□□□ -1.44
PSMD4-208	ENST00000462970	CXCL5	P42830	114 aa		6.04	□□□□□ -1.44
PSMD4-208	ENST00000462970	DMBT1	Q9UGM3	2413 aa	Predicted RBP	6.03	□□□□□ -1.44
PSMD4-208	ENST00000462970	NUPR1	O60356	82 aa		6.03	□□□□□ -1.44
PSMD4-208	ENST00000462970	LEPROTL1	O95214	131 aa		6.03	□□□□□ -1.44
PSMD4-208	ENST00000462970	LINC00310	P59036	64 aa		6.03	□□□□□ -1.44
PSMD4-208	ENST00000462970	TRAV12-1	A0A0B4J245	112 aa		6.02	□□□□□ -1.45
PSMD4-208	ENST00000462970	TLX1NB	P0CAT3	122 aa		6.02	□□□□□ -1.45
PSMD4-208	ENST00000462970	KRTAP10-4	P60372	401 aa	Predicted RBP	6.02	□□□□□ -1.45
PSMD4-208	ENST00000462970	PHF5A	Q7RTV0	110 aa	Known RBP	6.02	□□□□□ -1.45
PSMD4-208	ENST00000462970	XAGE1A	Q9HD64	81 aa		6.02	□□□□□ -1.45
PSMD4-208	ENST00000462970	HSPB8	Q9UJY1	196 aa		6.02	□□□□□ -1.45
PSMD4-208	ENST00000462970	HERC1	Q15751	4861 aa		6.01	□□□□□ -1.45
PSMD4-208	ENST00000462970	HIST1H2BK	O60814	126 aa		6.01	□□□□□ -1.45
PSMD4-208	ENST00000462970	HIST1H2BJ	P06899	126 aa		6.01	□□□□□ -1.45
PSMD4-208	ENST00000462970	HIST1H2BO	P23527	126 aa		6.01	□□□□□ -1.45
PSMD4-208	ENST00000462970	HIST1H2BB	P33778	126 aa		6.01	□□□□□ -1.45
PSMD4-208	ENST00000462970	HNRNPA3	P51991	378 aa	Known RBP	6.01	□□□□□ -1.45
PSMD4-208	ENST00000462970	HIST1H2BD	P58876	126 aa		6.01	□□□□□ -1.45
PSMD4-208	ENST00000462970	HIST1H2BC	P62807	126 aa		6.01	□□□□□ -1.45
PSMD4-208	ENST00000462970	HIST2H2BE	Q16778	126 aa		6.01	□□□□□ -1.45
PSMD4-208	ENST00000462970	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	6.01	□□□□□ -1.45
PSMD4-208	ENST00000462970	HIST1H2BH	Q93079	126 aa		6.01	□□□□□ -1.45
PSMD4-208	ENST00000462970	ZNF625	Q96I27	306 aa	Predicted RBP	6.01	□□□□□ -1.45
PSMD4-208	ENST00000462970	HIST1H2BN	Q99877	126 aa		6.01	□□□□□ -1.45
PSMD4-208	ENST00000462970	HIST1H2BM	Q99879	126 aa		6.01	□□□□□ -1.45
PSMD4-208	ENST00000462970	IGLV5-39	A0A0G2JS06	123 aa		6	□□□□□ -1.45
PSMD4-208	ENST00000462970		M0QXV9	152 aa		6	□□□□□ -1.45
PSMD4-208	ENST00000462970	PFN2	P35080	140 aa		6	□□□□□ -1.45
PSMD4-208	ENST00000462970	UBE2B	P63146	152 aa		6	□□□□□ -1.45
PSMD4-208	ENST00000462970	PRR3	P79522	188 aa	Known RBP	6	□□□□□ -1.45
PSMD4-208	ENST00000462970	C9orf129	Q5T035	196 aa	Known RBP	6	□□□□□ -1.45
PSMD4-208	ENST00000462970	PMCHL2	Q9BQD1	86 aa		6	□□□□□ -1.45
PSMD4-208	ENST00000462970	ODF1	Q14990	250 aa		5.99	□□□□□ -1.45
PSMD4-208	ENST00000462970	MAP1LC3C	Q9BXW4	147 aa		5.99	□□□□□ -1.45
PSMD4-208	ENST00000462970	TMEM223	A0PJW6	202 aa		5.98	□□□□□ -1.45
PSMD4-208	ENST00000462970	DPM2	O94777	84 aa		5.97	□□□□□ -1.45
PSMD4-208	ENST00000462970	C1orf137	Q5JT78	98 aa		5.97	□□□□□ -1.45
PSMD4-208	ENST00000462970	SERTAD4-AS1	Q5TG53	156 aa		5.97	□□□□□ -1.45
PSMD4-208	ENST00000462970	PSORS1C2	Q9UIG4	136 aa		5.97	□□□□□ -1.45
PSMD4-208	ENST00000462970	ERG28	Q9UKR5	140 aa		5.97	□□□□□ -1.45
PSMD4-208	ENST00000462970	MYCBP2	O75592	4640 aa		5.97	□□□□□ -1.45
PSMD4-208	ENST00000462970	PKHD1L1	Q86WI1	4243 aa		5.97	□□□□□ -1.45
PSMD4-208	ENST00000462970		A0A0U1RRA0	63 aa		5.96	□□□□□ -1.46
PSMD4-208	ENST00000462970	PLN	P26678	52 aa		5.96	□□□□□ -1.46
PSMD4-208	ENST00000462970	LINC00158	P58513	81 aa		5.96	□□□□□ -1.46
PSMD4-208	ENST00000462970	KRTAP7-1	Q8IUC3	87 aa		5.96	□□□□□ -1.46
PSMD4-208	ENST00000462970	GAGE10	A6NGK3	116 aa		5.95	□□□□□ -1.46
PSMD4-208	ENST00000462970	IGKC	P01834	107 aa		5.95	□□□□□ -1.46
PSMD4-208	ENST00000462970	HERVK_113	P61574	105 aa		5.95	□□□□□ -1.46
PSMD4-208	ENST00000462970	NKAPP1	Q8N9T2	125 aa		5.95	□□□□□ -1.46
PSMD4-208	ENST00000462970	LBH	Q53QV2	105 aa	Predicted RBP	5.94	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms