RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 DAD1P61803 113 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 REG3AQ06141 175 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 C6orf99Q4VX62 202 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 ENHOQ6UWT2 76 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 LINC00575Q6W349 94 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 LINC00269Q8N2A0 174 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 WFDC11Q8NEX6 87 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 BBC3Q96PG8 261 aaPredicted RBP2.42□□□□□ -2.02
COL8A1-204ENST00000462604 UPK3BQ9BT76 320 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 LAMTOR3Q9UHA4 124 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 PLA2G2DQ9UNK4 145 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 TACC2O95359 2948 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 ABCA2Q9BZC7 2435 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 SPTBN2O15020 2390 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 RELNP78509 3460 aa2.41□□□□□ -2.02
COL8A1-204ENST00000462604 ATRXP46100 2492 aa2.41□□□□□ -2.02
COL8A1-204ENST00000462604 TRAV23DV6A0A075B6W5 121 aa2.41□□□□□ -2.02
COL8A1-204ENST00000462604 A0A096LPF7 62 aa2.41□□□□□ -2.02
COL8A1-204ENST00000462604 LOC107984640A0A0U1RRK4 108 aa2.41□□□□□ -2.02
COL8A1-204ENST00000462604 APOC4P55056 127 aa2.41□□□□□ -2.02
COL8A1-204ENST00000462604 PRR3P79522 188 aaKnown RBP2.41□□□□□ -2.02
COL8A1-204ENST00000462604 RBM3P98179 157 aaKnown RBP2.41□□□□□ -2.02
COL8A1-204ENST00000462604 KIAA0087Q14695 138 aa2.41□□□□□ -2.02
COL8A1-204ENST00000462604 C5orf47Q569G3 176 aa2.41□□□□□ -2.02
COL8A1-204ENST00000462604 LYPD5Q6UWN5 251 aa2.41□□□□□ -2.02
COL8A1-204ENST00000462604 Q6ZQT0 140 aa2.41□□□□□ -2.02
COL8A1-204ENST00000462604 FAM19A5Q7Z5A7 132 aaPredicted RBP2.41□□□□□ -2.02
COL8A1-204ENST00000462604 C6orf223Q8N319 242 aa2.41□□□□□ -2.02
COL8A1-204ENST00000462604 ZNF843Q8N446 348 aa2.41□□□□□ -2.02
COL8A1-204ENST00000462604 DIRC1Q969H9 104 aa2.41□□□□□ -2.02
COL8A1-204ENST00000462604 DSCR8Q96T75 97 aa2.41□□□□□ -2.02
COL8A1-204ENST00000462604 DOPEY1Q5JWR5 2465 aa2.4□□□□□ -2.03
COL8A1-204ENST00000462604 IGLV10-54A0A075B6I4 117 aa2.4□□□□□ -2.03
COL8A1-204ENST00000462604 TRAV7A0A075B6U4 112 aa2.4□□□□□ -2.03
COL8A1-204ENST00000462604 GVQW2A0A096LPI5 108 aaPredicted RBP2.4□□□□□ -2.03
COL8A1-204ENST00000462604 A0A0A0MQY5 61 aa2.4□□□□□ -2.03
COL8A1-204ENST00000462604 FAM236DA0A1B0GTK5 79 aa2.4□□□□□ -2.03
COL8A1-204ENST00000462604 IGLV6-57P01721 117 aa2.4□□□□□ -2.03
COL8A1-204ENST00000462604 PLA2G1BP04054 148 aaKnown RBP2.4□□□□□ -2.03
COL8A1-204ENST00000462604 FAM236CP0DP71 79 aa2.4□□□□□ -2.03
COL8A1-204ENST00000462604 COX7BP24311 80 aa2.4□□□□□ -2.03
COL8A1-204ENST00000462604 HILS1P60008 231 aa2.4□□□□□ -2.03
COL8A1-204ENST00000462604 SEC61GP60059 68 aa2.4□□□□□ -2.03
COL8A1-204ENST00000462604 C9orf116Q5BN46 136 aaPredicted RBP2.4□□□□□ -2.03
COL8A1-204ENST00000462604 LELP1Q5T871 98 aa2.4□□□□□ -2.03
COL8A1-204ENST00000462604 C9orf66Q5T8R8 295 aa2.4□□□□□ -2.03
COL8A1-204ENST00000462604 UNQ6190/PRO20217Q6UXQ8 127 aa2.4□□□□□ -2.03
COL8A1-204ENST00000462604 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.4□□□□□ -2.03
COL8A1-204ENST00000462604 FAM19A1Q7Z5A9 133 aa2.4□□□□□ -2.03
COL8A1-204ENST00000462604 LINC00482Q8N8I6 264 aa2.4□□□□□ -2.03
COL8A1-204ENST00000462604 WFDC9Q8NEX5 89 aa2.4□□□□□ -2.03
COL8A1-204ENST00000462604 DPH3Q96FX2 82 aa2.4□□□□□ -2.03
COL8A1-204ENST00000462604 AKAP9Q99996 3911 aa2.39□□□□□ -2.03
COL8A1-204ENST00000462604 A0A0J9YWU9 116 aa2.39□□□□□ -2.03
COL8A1-204ENST00000462604 TRBV7-6A0A0J9YX20 115 aa2.39□□□□□ -2.03
COL8A1-204ENST00000462604 PRYO14603 147 aa2.39□□□□□ -2.03
COL8A1-204ENST00000462604 SPART-AS1P0CW21 52 aa2.39□□□□□ -2.03
COL8A1-204ENST00000462604 IGHV4-30-4P0DP06 118 aa2.39□□□□□ -2.03
COL8A1-204ENST00000462604 MIFP14174 115 aa2.39□□□□□ -2.03
COL8A1-204ENST00000462604 LINC01547P58512 204 aaPredicted RBP2.39□□□□□ -2.03
COL8A1-204ENST00000462604 CXCL6P80162 114 aa2.39□□□□□ -2.03
COL8A1-204ENST00000462604 HAMPP81172 84 aa2.39□□□□□ -2.03
COL8A1-204ENST00000462604 KRTAP1-1Q07627 177 aa2.39□□□□□ -2.03
COL8A1-204ENST00000462604 DEFB135Q30KP9 77 aa2.39□□□□□ -2.03
COL8A1-204ENST00000462604 Q6ZQY7 126 aa2.39□□□□□ -2.03
COL8A1-204ENST00000462604 Q6ZVQ6 151 aa2.39□□□□□ -2.03
COL8A1-204ENST00000462604 C20orf197Q8N268 126 aa2.39□□□□□ -2.03
COL8A1-204ENST00000462604 Q8NDZ9 215 aa2.39□□□□□ -2.03
COL8A1-204ENST00000462604 CYSTM1Q9H1C7 97 aa2.39□□□□□ -2.03
COL8A1-204ENST00000462604 ITPR1Q14643 2758 aa2.39□□□□□ -2.03
COL8A1-204ENST00000462604 CYSRT1A8MQ03 144 aa2.38□□□□□ -2.03
COL8A1-204ENST00000462604 M0R378 163 aa2.38□□□□□ -2.03
COL8A1-204ENST00000462604 DEFB4AO15263 64 aa2.38□□□□□ -2.03
COL8A1-204ENST00000462604 ZNF73O43830 326 aaPredicted RBP2.38□□□□□ -2.03
COL8A1-204ENST00000462604 VPREB1P12018 145 aa2.38□□□□□ -2.03
COL8A1-204ENST00000462604 HTN3P15516 51 aa2.38□□□□□ -2.03
COL8A1-204ENST00000462604 ATP5EP56381 51 aaPredicted RBP2.38□□□□□ -2.03
COL8A1-204ENST00000462604 ELOF1P60002 83 aaKnown RBP2.38□□□□□ -2.03
COL8A1-204ENST00000462604 C10orf25Q5T742 122 aa2.38□□□□□ -2.03
COL8A1-204ENST00000462604 PRR34Q9NV39 138 aa2.38□□□□□ -2.03
COL8A1-204ENST00000462604 KLK12Q9UKR0 248 aa2.38□□□□□ -2.03
COL8A1-204ENST00000462604 SERP1Q9Y6X1 66 aa2.38□□□□□ -2.03
COL8A1-204ENST00000462604 NCOR2Q9Y618 2525 aa2.38□□□□□ -2.03
COL8A1-204ENST00000462604 MED13LQ71F56 2210 aa2.38□□□□□ -2.03
COL8A1-204ENST00000462604 VPS13CQ709C8 3753 aa2.38□□□□□ -2.03
COL8A1-204ENST00000462604 DOPEY2Q9Y3R5 2298 aa2.38□□□□□ -2.03
COL8A1-204ENST00000462604 NBASA2RRP1 2371 aa2.37□□□□□ -2.03
COL8A1-204ENST00000462604 NDUFC1O43677 76 aa2.37□□□□□ -2.03
COL8A1-204ENST00000462604 EGFEM1PQ0D2K5 195 aa2.37□□□□□ -2.03
COL8A1-204ENST00000462604 Q8N3U1 123 aa2.37□□□□□ -2.03
COL8A1-204ENST00000462604 Q8NAQ8 132 aa2.37□□□□□ -2.03
COL8A1-204ENST00000462604 SPATA3Q8NHX4 192 aa2.37□□□□□ -2.03
COL8A1-204ENST00000462604 CAMK2N2Q96S95 79 aa2.37□□□□□ -2.03
COL8A1-204ENST00000462604 C6orf48Q9UBA6 75 aa2.37□□□□□ -2.03
COL8A1-204ENST00000462604 CELA1Q9UNI1 258 aa2.37□□□□□ -2.03
COL8A1-204ENST00000462604 AKAP6Q13023 2319 aa2.37□□□□□ -2.03
COL8A1-204ENST00000462604 COL6A6A6NMZ7 2263 aa2.37□□□□□ -2.03
COL8A1-204ENST00000462604 CELSR1Q9NYQ6 3014 aa2.36□□□□□ -2.03
COL8A1-204ENST00000462604 HIVEP3Q5T1R4 2406 aa2.36□□□□□ -2.03
COL8A1-204ENST00000462604 TRBV7-4A0A0J9YYF1 115 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms