RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 MAP1LC3AQ9H492 121 aa5.3□□□□□ -1.56
HDAC9-220ENST00000461409 C6orf48Q9UBA6 75 aa5.3□□□□□ -1.56
HDAC9-220ENST00000461409 GAGE2DQ9UEU5 116 aa5.3□□□□□ -1.56
HDAC9-220ENST00000461409 FAM168BA1KXE4 195 aa5.29□□□□□ -1.56
HDAC9-220ENST00000461409 NDUFC2-KCTD14E9PQ53 114 aa5.29□□□□□ -1.56
HDAC9-220ENST00000461409 KIAA0087Q14695 138 aa5.29□□□□□ -1.56
HDAC9-220ENST00000461409 LINC01561Q8N1V8 128 aa5.29□□□□□ -1.56
HDAC9-220ENST00000461409 PACRGQ96M98 296 aaPredicted RBP5.29□□□□□ -1.56
HDAC9-220ENST00000461409 CYSLTR1Q9Y271 337 aa5.29□□□□□ -1.56
HDAC9-220ENST00000461409 LOC389332A0A1B0GUA5 103 aa5.28□□□□□ -1.56
HDAC9-220ENST00000461409 A0A1B0GVG6 124 aa5.28□□□□□ -1.56
HDAC9-220ENST00000461409 PRSS47A8MTI9 375 aa5.28□□□□□ -1.56
HDAC9-220ENST00000461409 H0Y9J4 135 aa5.28□□□□□ -1.56
HDAC9-220ENST00000461409 K7EMI3 77 aa5.28□□□□□ -1.56
HDAC9-220ENST00000461409 M0QXV9 152 aa5.28□□□□□ -1.56
HDAC9-220ENST00000461409 MT-ND4LP03901 98 aa5.28□□□□□ -1.56
HDAC9-220ENST00000461409 PRSS2P07478 247 aa5.28□□□□□ -1.56
HDAC9-220ENST00000461409 NPSP0C0P6 89 aa5.28□□□□□ -1.56
HDAC9-220ENST00000461409 UBE2D1P51668 147 aa5.28□□□□□ -1.56
HDAC9-220ENST00000461409 UBE2BP63146 152 aa5.28□□□□□ -1.56
HDAC9-220ENST00000461409 PNRC1Q12796 327 aaPredicted RBP5.28□□□□□ -1.56
HDAC9-220ENST00000461409 ORMDL2Q53FV1 153 aa5.28□□□□□ -1.56
HDAC9-220ENST00000461409 VCX2Q9H322 139 aa5.28□□□□□ -1.56
HDAC9-220ENST00000461409 CKS1BP61024 79 aa5.27□□□□□ -1.57
HDAC9-220ENST00000461409 PAPPA-AS1Q5QFB9 102 aa5.27□□□□□ -1.57
HDAC9-220ENST00000461409 C2orf82Q6UX34 121 aa5.27□□□□□ -1.57
HDAC9-220ENST00000461409 C2orf66Q6UXQ4 117 aa5.27□□□□□ -1.57
HDAC9-220ENST00000461409 Q8N8P6 123 aa5.27□□□□□ -1.57
HDAC9-220ENST00000461409 IGLV1-50A0A075B6I6 118 aa5.26□□□□□ -1.57
HDAC9-220ENST00000461409 G0S2P27469 103 aa5.26□□□□□ -1.57
HDAC9-220ENST00000461409 SEC11AP67812 179 aa5.26□□□□□ -1.57
HDAC9-220ENST00000461409 PRR26Q8N8Z3 221 aa5.26□□□□□ -1.57
HDAC9-220ENST00000461409 AMELXQ99217 191 aa5.26□□□□□ -1.57
HDAC9-220ENST00000461409 NXT2Q9NPJ8 142 aaKnown RBP5.26□□□□□ -1.57
HDAC9-220ENST00000461409 RPL13AP40429 203 aaKnown RBP5.25□□□□□ -1.57
HDAC9-220ENST00000461409 HERVK_113P63121 156 aa5.25□□□□□ -1.57
HDAC9-220ENST00000461409 C6orf226Q5I0X4 101 aa5.25□□□□□ -1.57
HDAC9-220ENST00000461409 C9orf129Q5T035 196 aaKnown RBP5.25□□□□□ -1.57
HDAC9-220ENST00000461409 KRTAP11-1Q8IUC1 163 aa5.25□□□□□ -1.57
HDAC9-220ENST00000461409 Q8IZM0 81 aa5.25□□□□□ -1.57
HDAC9-220ENST00000461409 TOMM7Q9P0U1 55 aa5.25□□□□□ -1.57
HDAC9-220ENST00000461409 IGIPA6NJ69 53 aa5.24□□□□□ -1.57
HDAC9-220ENST00000461409 RAB14P61106 215 aa5.24□□□□□ -1.57
HDAC9-220ENST00000461409 LBHQ53QV2 105 aaPredicted RBP5.24□□□□□ -1.57
HDAC9-220ENST00000461409 LINC00173Q6ZV60 143 aa5.24□□□□□ -1.57
HDAC9-220ENST00000461409 FAM19A3Q7Z5A8 133 aa5.24□□□□□ -1.57
HDAC9-220ENST00000461409 KRTAP7-1Q8IUC3 87 aa5.24□□□□□ -1.57
HDAC9-220ENST00000461409 ALKBH7Q9BT30 221 aaPredicted RBP5.24□□□□□ -1.57
HDAC9-220ENST00000461409 CTDSP1Q9GZU7 261 aa5.24□□□□□ -1.57
HDAC9-220ENST00000461409 GEMIN7Q9H840 131 aaKnown RBP5.24□□□□□ -1.57
HDAC9-220ENST00000461409 F8VRH5 84 aa5.23□□□□□ -1.57
HDAC9-220ENST00000461409 KRTAP1-4P0C5Y4 121 aa5.23□□□□□ -1.57
HDAC9-220ENST00000461409 ZC2HC1BQ5TFG8 222 aa5.23□□□□□ -1.57
HDAC9-220ENST00000461409 TIMM17AQ99595 171 aa5.23□□□□□ -1.57
HDAC9-220ENST00000461409 NUPR1O60356 82 aa5.22□□□□□ -1.57
HDAC9-220ENST00000461409 CXCL5P42830 114 aa5.22□□□□□ -1.57
HDAC9-220ENST00000461409 CDKN2A-AS1Q9UH64 79 aa5.22□□□□□ -1.57
HDAC9-220ENST00000461409 CARHSP1Q9Y2V2 147 aaKnown RBP5.22□□□□□ -1.57
HDAC9-220ENST00000461409 LINC01549A6NIU2 74 aa5.21□□□□□ -1.58
HDAC9-220ENST00000461409 ZNF861PO60384 105 aa5.21□□□□□ -1.58
HDAC9-220ENST00000461409 LINC00469Q8N7U9 141 aa5.21□□□□□ -1.58
HDAC9-220ENST00000461409 TOMM6Q96B49 74 aa5.21□□□□□ -1.58
HDAC9-220ENST00000461409 XAGE1AQ9HD64 81 aa5.21□□□□□ -1.58
HDAC9-220ENST00000461409 TP73-AS1Q9UF72 201 aa5.21□□□□□ -1.58
HDAC9-220ENST00000461409 C22orf24Q9Y442 160 aa5.21□□□□□ -1.58
HDAC9-220ENST00000461409 TRAV9-1A0A075B6T8 112 aa5.2□□□□□ -1.58
HDAC9-220ENST00000461409 RPL28P46779 137 aaKnown RBP5.2□□□□□ -1.58
HDAC9-220ENST00000461409 ERASQ7Z444 233 aa5.2□□□□□ -1.58
HDAC9-220ENST00000461409 MRPL55Q7Z7F7 128 aaKnown RBP5.2□□□□□ -1.58
HDAC9-220ENST00000461409 SCGB3A1Q96QR1 104 aa5.2□□□□□ -1.58
HDAC9-220ENST00000461409 TINCRA0A1B0GVN0 87 aa5.19□□□□□ -1.58
HDAC9-220ENST00000461409 PDZD11Q5EBL8 140 aa5.19□□□□□ -1.58
HDAC9-220ENST00000461409 SMIM1B2RUZ4 78 aa5.18□□□□□ -1.58
HDAC9-220ENST00000461409 BCE1O60756 84 aa5.18□□□□□ -1.58
HDAC9-220ENST00000461409 PRR4Q16378 134 aa5.18□□□□□ -1.58
HDAC9-220ENST00000461409 KIAA1644Q3SXP7 199 aa5.18□□□□□ -1.58
HDAC9-220ENST00000461409 COX7B2Q8TF08 81 aa5.18□□□□□ -1.58
HDAC9-220ENST00000461409 IGLV5-45A0A087WSX0 123 aa5.17□□□□□ -1.58
HDAC9-220ENST00000461409 S100PP25815 95 aa5.17□□□□□ -1.58
HDAC9-220ENST00000461409 CLLU1Q5K131 121 aa5.17□□□□□ -1.58
HDAC9-220ENST00000461409 UQCC3Q6UW78 93 aa5.17□□□□□ -1.58
HDAC9-220ENST00000461409 LPAP08519 4548 aa5.16□□□□□ -1.58
HDAC9-220ENST00000461409 LINC01546A6NGU7 62 aa5.16□□□□□ -1.58
HDAC9-220ENST00000461409 H3BRM9 83 aa5.16□□□□□ -1.58
HDAC9-220ENST00000461409 CRYGAP11844 174 aa5.16□□□□□ -1.58
HDAC9-220ENST00000461409 ADCYAP1P18509 176 aa5.16□□□□□ -1.58
HDAC9-220ENST00000461409 PMVKQ15126 192 aa5.16□□□□□ -1.58
HDAC9-220ENST00000461409 NKAPP1Q8N9T2 125 aa5.16□□□□□ -1.58
HDAC9-220ENST00000461409 GNB1LQ9BYB4 327 aa5.16□□□□□ -1.58
HDAC9-220ENST00000461409 CST9LQ9H4G1 147 aa5.16□□□□□ -1.58
HDAC9-220ENST00000461409 TMEM218A2RU14 115 aa5.15□□□□□ -1.59
HDAC9-220ENST00000461409 RPL37AP8A6NKH3 93 aa5.15□□□□□ -1.59
HDAC9-220ENST00000461409 ATP5LO75964 103 aa5.15□□□□□ -1.59
HDAC9-220ENST00000461409 COX19Q49B96 90 aa5.15□□□□□ -1.59
HDAC9-220ENST00000461409 FA2HQ7L5A8 372 aa5.15□□□□□ -1.59
HDAC9-220ENST00000461409 LINC00167Q96N53 147 aa5.15□□□□□ -1.59
HDAC9-220ENST00000461409 SMCO4Q9NRQ5 59 aa5.15□□□□□ -1.59
HDAC9-220ENST00000461409 IGLV5-37A0A075B6J1 123 aa5.14□□□□□ -1.59
HDAC9-220ENST00000461409 GAGE10A6NGK3 116 aa5.14□□□□□ -1.59
HDAC9-220ENST00000461409 SPINK8P0C7L1 97 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms