RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 HIST1H1AQ02539 215 aaPredicted RBP1.33□□□□□ -2.2
CLK1-206ENST00000461326 RHEBQ15382 184 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 KHDC3LQ587J8 217 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 GDF5OSQ5U4N7 250 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 LINC00322Q6ZN03 302 aaPredicted RBP1.33□□□□□ -2.2
CLK1-206ENST00000461326 Q6ZQT0 140 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 S100A7AQ86SG5 101 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 OR5A1Q8NGJ0 315 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 OR2T35Q8NGX2 323 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 GGACTQ9BVM4 153 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 RNASE7Q9H1E1 156 aaKnown RBP1.33□□□□□ -2.2
CLK1-206ENST00000461326 OSTCQ9NRP0 149 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 RPRMQ9NS64 109 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 EPDR1Q9UM22 224 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 HSPB11Q9Y547 144 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 HLA-DRB4X5D2U9 266 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 STARD9Q9P2P6 4700 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 DYNC2H1Q8NCM8 4307 aaKnown RBP1.32□□□□□ -2.2
CLK1-206ENST00000461326 FRAS1Q86XX4 4008 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 TRBV19A0A075B6N1 114 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 TRAV12-2A0A075B6T6 113 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 BORCS7-ASMTA0A0B4J1R7 106 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 IGKV3D-7A0A0C4DH55 119 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 IGKV3OR2-268A0A0C4DH90 116 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 H3BQ15 152 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 M0R2Z0 102 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 HMGB3O15347 200 aaKnown RBP1.32□□□□□ -2.2
CLK1-206ENST00000461326 ARPC5O15511 151 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 BAALC-AS2P0C853 105 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 HTN1P15515 57 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 PSG9Q00887 426 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 SPINK13Q1W4C9 94 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 LINC01554Q52M75 96 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 Q5BKY6 102 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 LYRM7Q5U5X0 104 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 SAMD13Q5VXD3 122 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 FOXI2Q6ZQN5 318 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 EXOC3-AS1Q8N2X6 119 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 HYLS1Q96M11 299 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 AQP10Q96PS8 301 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 SLC50A1Q9BRV3 221 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 SLC35B3Q9H1N7 401 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 SH3BGRL3Q9H299 93 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 HECTD4Q9Y4D8 3996 aa1.32□□□□□ -2.2
CLK1-206ENST00000461326 ALMS1Q8TCU4 4167 aa1.31□□□□□ -2.2
CLK1-206ENST00000461326 IGKV2-40A0A087WW87 121 aaPredicted RBP1.31□□□□□ -2.2
CLK1-206ENST00000461326 KANTRA0A1W2PQU2 76 aa1.31□□□□□ -2.2
CLK1-206ENST00000461326 C7orf71A4D174 169 aa1.31□□□□□ -2.2
CLK1-206ENST00000461326 M0R3E3 92 aa1.31□□□□□ -2.2
CLK1-206ENST00000461326 PFDN1O60925 122 aa1.31□□□□□ -2.2
CLK1-206ENST00000461326 IGKV2D-40P01614 121 aaPredicted RBP1.31□□□□□ -2.2
CLK1-206ENST00000461326 ANGP03950 147 aaKnown RBP1.31□□□□□ -2.2
CLK1-206ENST00000461326 SLC25A5P05141 298 aaKnown RBP1.31□□□□□ -2.2
CLK1-206ENST00000461326 NBEAP1P0C6P0 100 aa1.31□□□□□ -2.2
CLK1-206ENST00000461326 IGLC2P0DOY2 106 aa1.31□□□□□ -2.2
CLK1-206ENST00000461326 MIFP14174 115 aa1.31□□□□□ -2.2
CLK1-206ENST00000461326 HTN3P15516 51 aa1.31□□□□□ -2.2
CLK1-206ENST00000461326 RNASE4P34096 147 aaKnown RBP1.31□□□□□ -2.2
CLK1-206ENST00000461326 GNG5P63218 68 aa1.31□□□□□ -2.2
CLK1-206ENST00000461326 UBE2L3P68036 154 aaKnown RBP1.31□□□□□ -2.2
CLK1-206ENST00000461326 PDE6HQ13956 83 aa1.31□□□□□ -2.2
CLK1-206ENST00000461326 RRN3P1Q2M238 152 aa1.31□□□□□ -2.2
CLK1-206ENST00000461326 FAM74A1Q5RGS3 127 aa1.31□□□□□ -2.2
CLK1-206ENST00000461326 AKR1C8PQ5T2L2 129 aa1.31□□□□□ -2.2
CLK1-206ENST00000461326 TMEM78Q5T7P6 136 aa1.31□□□□□ -2.2
CLK1-206ENST00000461326 RPL7L1Q6DKI1 246 aaKnown RBP1.31□□□□□ -2.2
CLK1-206ENST00000461326 Q8TAT8 98 aa1.31□□□□□ -2.2
CLK1-206ENST00000461326 FAM167A-AS1Q96KT0 104 aa1.31□□□□□ -2.2
CLK1-206ENST00000461326 PSMG3Q9BT73 122 aaPredicted RBP1.31□□□□□ -2.2
CLK1-206ENST00000461326 TMEM14CQ9P0S9 112 aa1.31□□□□□ -2.2
CLK1-206ENST00000461326 TNFSF18Q9UNG2 199 aa1.31□□□□□ -2.2
CLK1-206ENST00000461326 STAB2Q8WWQ8 2551 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 DEFB131BA0A096LNP1 70 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 TRAV10A0A0B4J240 114 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 TRAV12-3A0A0B4J271 114 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 CTXND1A0A1B0GTU2 59 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 TMEM189A5PLL7 270 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 MAP1LC3B2A6NCE7 125 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 NUPR2A6NF83 97 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 A8MTW9 85 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 F6UZH7 168 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 LY6G6CO95867 125 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 C1QBP02746 253 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 SPART-AS1P0CW21 52 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 DEFB130BP0DP73 79 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 DEFB130AP0DP74 79 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 TPT1P13693 172 aaKnown RBP1.3□□□□□ -2.2
CLK1-206ENST00000461326 GCHFRP30047 84 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 SERF2P84101 59 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 GOLT1AQ6ZVE7 132 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 LCA10Q71F78 164 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 AKAP14Q86UN6 197 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 TCTE3Q8IZS6 198 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 KCNRGQ8N5I3 272 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 FAM213BQ8TBF2 198 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 MAP1LC3BQ9GZQ8 125 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 AGPAT4-IT1Q9H0P7 198 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 OTORQ9NRC9 128 aa1.3□□□□□ -2.2
CLK1-206ENST00000461326 TIMM8BQ9Y5J9 83 aaPredicted RBP1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms