RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 IGLV9-49A0A0B4J1Y8 123 aa4.36□□□□□ -1.71
NUP50-212ENST00000461194 G0S2P27469 103 aa4.36□□□□□ -1.71
NUP50-212ENST00000461194 SYCNQ0VAF6 134 aa4.36□□□□□ -1.71
NUP50-212ENST00000461194 DPH3Q96FX2 82 aa4.36□□□□□ -1.71
NUP50-212ENST00000461194 TMEM141Q96I45 108 aa4.36□□□□□ -1.71
NUP50-212ENST00000461194 C2orf48Q96LS8 159 aa4.36□□□□□ -1.71
NUP50-212ENST00000461194 RPS10P5Q9NQ39 176 aa4.36□□□□□ -1.71
NUP50-212ENST00000461194 PLAC8Q9NZF1 115 aa4.36□□□□□ -1.71
NUP50-212ENST00000461194 PKIGQ9Y2B9 76 aa4.36□□□□□ -1.71
NUP50-212ENST00000461194 IGKV2-24A0A0C4DH68 120 aa4.35□□□□□ -1.71
NUP50-212ENST00000461194 IGIPA6NJ69 53 aa4.35□□□□□ -1.71
NUP50-212ENST00000461194 MT-ND6P03923 174 aa4.35□□□□□ -1.71
NUP50-212ENST00000461194 MT3P25713 68 aa4.35□□□□□ -1.71
NUP50-212ENST00000461194 RPL37AP61513 92 aaKnown RBP4.35□□□□□ -1.71
NUP50-212ENST00000461194 SPAG11BQ08648 103 aa4.35□□□□□ -1.71
NUP50-212ENST00000461194 MAJINQ3KP22 176 aa4.35□□□□□ -1.71
NUP50-212ENST00000461194 LINC00242Q5T6M2 205 aa4.35□□□□□ -1.71
NUP50-212ENST00000461194 Q6ZN92 141 aa4.35□□□□□ -1.71
NUP50-212ENST00000461194 TEX43Q6ZNM6 134 aa4.35□□□□□ -1.71
NUP50-212ENST00000461194 Q6ZRU5 148 aa4.35□□□□□ -1.71
NUP50-212ENST00000461194 OR10D4PQ8NGN7 298 aa4.35□□□□□ -1.71
NUP50-212ENST00000461194 CAMK2N2Q96S95 79 aa4.35□□□□□ -1.71
NUP50-212ENST00000461194 AMELXQ99217 191 aa4.35□□□□□ -1.71
NUP50-212ENST00000461194 ALKBH7Q9BT30 221 aaPredicted RBP4.35□□□□□ -1.71
NUP50-212ENST00000461194 LINC00474Q9P2X8 69 aa4.35□□□□□ -1.71
NUP50-212ENST00000461194 SRRM2Q9UQ35 2752 aaKnown RBP4.35□□□□□ -1.71
NUP50-212ENST00000461194 FLG2Q5D862 2391 aaPredicted RBP4.34□□□□□ -1.71
NUP50-212ENST00000461194 A0A087WZ39 114 aa4.34□□□□□ -1.71
NUP50-212ENST00000461194 A0A096LNI7 61 aa4.34□□□□□ -1.71
NUP50-212ENST00000461194 TGIF2-C20orf24A0A0A6YYL0 155 aa4.34□□□□□ -1.71
NUP50-212ENST00000461194 LINC01546A6NGU7 62 aa4.34□□□□□ -1.71
NUP50-212ENST00000461194 F8WDY8 70 aa4.34□□□□□ -1.71
NUP50-212ENST00000461194 APOC3P02656 99 aa4.34□□□□□ -1.71
NUP50-212ENST00000461194 UBE2D1P51668 147 aa4.34□□□□□ -1.71
NUP50-212ENST00000461194 FABP9Q0Z7S8 132 aa4.34□□□□□ -1.71
NUP50-212ENST00000461194 NDUFA5Q16718 116 aa4.34□□□□□ -1.71
NUP50-212ENST00000461194 LINC00173Q6ZV60 143 aa4.34□□□□□ -1.71
NUP50-212ENST00000461194 SVBPQ8N300 66 aa4.34□□□□□ -1.71
NUP50-212ENST00000461194 ORAOV1Q8WV07 137 aa4.34□□□□□ -1.71
NUP50-212ENST00000461194 TOMM6Q96B49 74 aa4.34□□□□□ -1.71
NUP50-212ENST00000461194 TIMM17AQ99595 171 aa4.34□□□□□ -1.71
NUP50-212ENST00000461194 C2orf88Q9BSF0 95 aa4.34□□□□□ -1.71
NUP50-212ENST00000461194 VCX2Q9H322 139 aa4.34□□□□□ -1.71
NUP50-212ENST00000461194 HERC1Q15751 4861 aa4.33□□□□□ -1.72
NUP50-212ENST00000461194 SNAPINO95295 136 aa4.33□□□□□ -1.72
NUP50-212ENST00000461194 ZC2HC1BQ5TFG8 222 aa4.33□□□□□ -1.72
NUP50-212ENST00000461194 FAM19A3Q7Z5A8 133 aa4.33□□□□□ -1.72
NUP50-212ENST00000461194 LINC01561Q8N1V8 128 aa4.33□□□□□ -1.72
NUP50-212ENST00000461194 MRPL35Q9NZE8 188 aaKnown RBP4.33□□□□□ -1.72
NUP50-212ENST00000461194 LOC107984640A0A0U1RRK4 108 aa4.32□□□□□ -1.72
NUP50-212ENST00000461194 LINC01549A6NIU2 74 aa4.32□□□□□ -1.72
NUP50-212ENST00000461194 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.32□□□□□ -1.72
NUP50-212ENST00000461194 SEC11AP67812 179 aa4.32□□□□□ -1.72
NUP50-212ENST00000461194 KIAA0087Q14695 138 aa4.32□□□□□ -1.72
NUP50-212ENST00000461194 ERASQ7Z444 233 aa4.32□□□□□ -1.72
NUP50-212ENST00000461194 C7orf33Q8WU49 177 aa4.32□□□□□ -1.72
NUP50-212ENST00000461194 SCGB3A1Q96QR1 104 aa4.32□□□□□ -1.72
NUP50-212ENST00000461194 TRAPPC1Q9Y5R8 145 aa4.32□□□□□ -1.72
NUP50-212ENST00000461194 NDUFA1O15239 70 aa4.31□□□□□ -1.72
NUP50-212ENST00000461194 HNRNPA3P51991 378 aaKnown RBP4.31□□□□□ -1.72
NUP50-212ENST00000461194 FA2HQ7L5A8 372 aa4.31□□□□□ -1.72
NUP50-212ENST00000461194 LITAFQ99732 161 aa4.31□□□□□ -1.72
NUP50-212ENST00000461194 SMCO4Q9NRQ5 59 aa4.31□□□□□ -1.72
NUP50-212ENST00000461194 LRP1Q07954 4544 aaKnown RBP4.31□□□□□ -1.72
NUP50-212ENST00000461194 A0A0J9YXV3 536 aa4.3□□□□□ -1.72
NUP50-212ENST00000461194 TLX1NBP0CAT3 122 aa4.3□□□□□ -1.72
NUP50-212ENST00000461194 HERVK_113P63121 156 aa4.3□□□□□ -1.72
NUP50-212ENST00000461194 UNQ6190/PRO20217Q6UXQ8 127 aa4.3□□□□□ -1.72
NUP50-212ENST00000461194 YPEL4Q96NS1 127 aa4.3□□□□□ -1.72
NUP50-212ENST00000461194 C6orf48Q9UBA6 75 aa4.3□□□□□ -1.72
NUP50-212ENST00000461194 FAT3Q8TDW7 4589 aa4.29□□□□□ -1.72
NUP50-212ENST00000461194 DMBT1Q9UGM3 2413 aaPredicted RBP4.29□□□□□ -1.72
NUP50-212ENST00000461194 TRBV30A0A0K0K1B3 111 aa4.29□□□□□ -1.72
NUP50-212ENST00000461194 A0A1W2PNN7 141 aa4.29□□□□□ -1.72
NUP50-212ENST00000461194 OXTP01178 125 aa4.29□□□□□ -1.72
NUP50-212ENST00000461194 LINC00614P0C842 121 aa4.29□□□□□ -1.72
NUP50-212ENST00000461194 RPL18AQ02543 176 aaKnown RBP4.29□□□□□ -1.72
NUP50-212ENST00000461194 C9orf116Q5BN46 136 aaPredicted RBP4.29□□□□□ -1.72
NUP50-212ENST00000461194 Q6ZRP5 223 aa4.29□□□□□ -1.72
NUP50-212ENST00000461194 C18orf32Q8TCD1 76 aa4.29□□□□□ -1.72
NUP50-212ENST00000461194 PRAC1Q96KF2 57 aa4.29□□□□□ -1.72
NUP50-212ENST00000461194 CST9LQ9H4G1 147 aa4.29□□□□□ -1.72
NUP50-212ENST00000461194 GEMIN7Q9H840 131 aaKnown RBP4.29□□□□□ -1.72
NUP50-212ENST00000461194 CDKN2A-AS1Q9UH64 79 aa4.29□□□□□ -1.72
NUP50-212ENST00000461194 A0A096LNJ9 63 aa4.28□□□□□ -1.72
NUP50-212ENST00000461194 TINCRA0A1B0GVN0 87 aa4.28□□□□□ -1.72
NUP50-212ENST00000461194 RAB5BP61020 215 aa4.28□□□□□ -1.72
NUP50-212ENST00000461194 PRR3P79522 188 aaKnown RBP4.28□□□□□ -1.72
NUP50-212ENST00000461194 PMVKQ15126 192 aa4.28□□□□□ -1.72
NUP50-212ENST00000461194 C2orf82Q6UX34 121 aa4.28□□□□□ -1.72
NUP50-212ENST00000461194 Q8IZM0 81 aa4.28□□□□□ -1.72
NUP50-212ENST00000461194 PACRGQ96M98 296 aaPredicted RBP4.28□□□□□ -1.72
NUP50-212ENST00000461194 TOMM7Q9P0U1 55 aa4.28□□□□□ -1.72
NUP50-212ENST00000461194 NDUFC2-KCTD14E9PQ53 114 aa4.27□□□□□ -1.73
NUP50-212ENST00000461194 HBDP02042 147 aa4.27□□□□□ -1.73
NUP50-212ENST00000461194 CKS1BP61024 79 aa4.27□□□□□ -1.73
NUP50-212ENST00000461194 C6orf226Q5I0X4 101 aa4.27□□□□□ -1.73
NUP50-212ENST00000461194 LINC00469Q8N7U9 141 aa4.27□□□□□ -1.73
NUP50-212ENST00000461194 CXCL5P42830 114 aa4.26□□□□□ -1.73
NUP50-212ENST00000461194 PDZD11Q5EBL8 140 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms