RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 IGHV4-28A0A0C4DH34 117 aa8.27□□□□□ -1.09
NPHP4-204ENST00000460696 LYRM9A8MSI8 78 aa8.27□□□□□ -1.09
NPHP4-204ENST00000460696 SLPIP03973 132 aa8.27□□□□□ -1.09
NPHP4-204ENST00000460696 FHL2Q14192 279 aa8.27□□□□□ -1.09
NPHP4-204ENST00000460696 CAMK2N2Q96S95 79 aa8.26□□□□□ -1.09
NPHP4-204ENST00000460696 SPATA25Q9BR10 227 aa8.26□□□□□ -1.09
NPHP4-204ENST00000460696 IBA57-AS1B1ANH7 110 aa8.26□□□□□ -1.09
NPHP4-204ENST00000460696 SMCPP49901 116 aaPredicted RBP8.25□□□□□ -1.09
NPHP4-204ENST00000460696 C1orf43Q9BWL3 253 aa8.25□□□□□ -1.09
NPHP4-204ENST00000460696 C14orf132Q9NPU4 83 aa8.25□□□□□ -1.09
NPHP4-204ENST00000460696 IGKV3D-7A0A0C4DH55 119 aa8.25□□□□□ -1.09
NPHP4-204ENST00000460696 GHRHP01286 108 aa8.25□□□□□ -1.09
NPHP4-204ENST00000460696 FHL3Q13643 280 aa8.24□□□□□ -1.09
NPHP4-204ENST00000460696 NBEAL2Q6ZNJ1 2754 aa8.24□□□□□ -1.09
NPHP4-204ENST00000460696 CCL18P55774 89 aa8.24□□□□□ -1.09
NPHP4-204ENST00000460696 HIGD2BQ4VC39 106 aa8.24□□□□□ -1.09
NPHP4-204ENST00000460696 TMEM126AQ9H061 195 aa8.24□□□□□ -1.09
NPHP4-204ENST00000460696 CSDC2Q9Y534 153 aaKnown RBP8.24□□□□□ -1.09
NPHP4-204ENST00000460696 ACYP1P07311 99 aa8.23□□□□□ -1.09
NPHP4-204ENST00000460696 HAMPP81172 84 aa8.23□□□□□ -1.09
NPHP4-204ENST00000460696 RPL18AQ02543 176 aaKnown RBP8.23□□□□□ -1.09
NPHP4-204ENST00000460696 KRTAP1-1Q07627 177 aa8.23□□□□□ -1.09
NPHP4-204ENST00000460696 C16orf95Q9H693 158 aa8.23□□□□□ -1.09
NPHP4-204ENST00000460696 PRO0461Q9UI25 63 aa8.23□□□□□ -1.09
NPHP4-204ENST00000460696 FAM236AA0A1B0GUQ0 79 aa8.23□□□□□ -1.09
NPHP4-204ENST00000460696 FAM236BA0A1B0GV22 79 aa8.23□□□□□ -1.09
NPHP4-204ENST00000460696 RNF183Q96D59 192 aa8.23□□□□□ -1.09
NPHP4-204ENST00000460696 RETNQ9HD89 108 aa8.23□□□□□ -1.09
NPHP4-204ENST00000460696 XAGE1AQ9HD64 81 aa8.22□□□□□ -1.09
NPHP4-204ENST00000460696 CXCL5P42830 114 aa8.22□□□□□ -1.09
NPHP4-204ENST00000460696 C9orf153Q5TBE3 101 aa8.22□□□□□ -1.09
NPHP4-204ENST00000460696 NKAPP1Q8N9T2 125 aa8.21□□□□□ -1.09
NPHP4-204ENST00000460696 SMIM11BQ8TCY0 68 aa8.21□□□□□ -1.09
NPHP4-204ENST00000460696 CLUHP3Q96NS8 147 aa8.21□□□□□ -1.09
NPHP4-204ENST00000460696 UBL5Q9BZL1 73 aa8.21□□□□□ -1.09
NPHP4-204ENST00000460696 TRACP01848 142 aa8.21□□□□□ -1.1
NPHP4-204ENST00000460696 MIFP14174 115 aa8.21□□□□□ -1.1
NPHP4-204ENST00000460696 FBN2P35556 2912 aa8.2□□□□□ -1.1
NPHP4-204ENST00000460696 SS18L2Q9UHA2 77 aa8.2□□□□□ -1.1
NPHP4-204ENST00000460696 C9orf116Q5BN46 136 aaPredicted RBP8.2□□□□□ -1.1
NPHP4-204ENST00000460696 CD164L2Q6UWJ8 174 aa8.2□□□□□ -1.1
NPHP4-204ENST00000460696 KIR2DL5BQ8NHK3 375 aa8.2□□□□□ -1.1
NPHP4-204ENST00000460696 A0A087WZ39 114 aa8.19□□□□□ -1.1
NPHP4-204ENST00000460696 PRR3P79522 188 aaKnown RBP8.19□□□□□ -1.1
NPHP4-204ENST00000460696 DSCR8Q96T75 97 aa8.19□□□□□ -1.1
NPHP4-204ENST00000460696 PSCAO43653 123 aa8.19□□□□□ -1.1
NPHP4-204ENST00000460696 IGHV4-30-4P0DP06 118 aa8.19□□□□□ -1.1
NPHP4-204ENST00000460696 C6orf99Q4VX62 202 aa8.19□□□□□ -1.1
NPHP4-204ENST00000460696 STAB2Q8WWQ8 2551 aa8.18□□□□□ -1.1
NPHP4-204ENST00000460696 IGLV5-39A0A0G2JS06 123 aa8.18□□□□□ -1.1
NPHP4-204ENST00000460696 NDUFV3P56181 108 aaKnown RBP8.17□□□□□ -1.1
NPHP4-204ENST00000460696 DEFB105AQ8NG35 78 aa8.17□□□□□ -1.1
NPHP4-204ENST00000460696 EIF4EBP3O60516 100 aaPredicted RBP8.16□□□□□ -1.1
NPHP4-204ENST00000460696 LINC00643Q86TS7 51 aa8.16□□□□□ -1.1
NPHP4-204ENST00000460696 A8MTW9 85 aa8.16□□□□□ -1.1
NPHP4-204ENST00000460696 SOSTDC1Q6X4U4 206 aa8.16□□□□□ -1.1
NPHP4-204ENST00000460696 CDIP1Q9H305 208 aa8.16□□□□□ -1.1
NPHP4-204ENST00000460696 CELSR1Q9NYQ6 3014 aa8.16□□□□□ -1.1
NPHP4-204ENST00000460696 IGHV3OR16-9A0A0B4J2B5 98 aa8.15□□□□□ -1.1
NPHP4-204ENST00000460696 UNQ6190/PRO20217Q6UXQ8 127 aa8.15□□□□□ -1.1
NPHP4-204ENST00000460696 Q8IZM0 81 aa8.15□□□□□ -1.1
NPHP4-204ENST00000460696 IGLV5-45A0A087WSX0 123 aa8.15□□□□□ -1.11
NPHP4-204ENST00000460696 LINC00337Q8N6G1 96 aa8.15□□□□□ -1.11
NPHP4-204ENST00000460696 KPRPQ5T749 579 aaPredicted RBP8.14□□□□□ -1.11
NPHP4-204ENST00000460696 C11orf45Q8TAV5 145 aa8.14□□□□□ -1.11
NPHP4-204ENST00000460696 LITAFQ99732 161 aa8.14□□□□□ -1.11
NPHP4-204ENST00000460696 SDIM1Q6ZPB5 146 aa8.14□□□□□ -1.11
NPHP4-204ENST00000460696 OTOGQ6ZRI0 2925 aa8.14□□□□□ -1.11
NPHP4-204ENST00000460696 NBPF19A0A087WUL8 3843 aa8.14□□□□□ -1.11
NPHP4-204ENST00000460696 CSMD1Q96PZ7 3565 aa8.14□□□□□ -1.11
NPHP4-204ENST00000460696 DEFB131BA0A096LNP1 70 aa8.14□□□□□ -1.11
NPHP4-204ENST00000460696 TMEM256-PLSCR3K7ERE1 68 aa8.14□□□□□ -1.11
NPHP4-204ENST00000460696 LELP1Q5T871 98 aa8.14□□□□□ -1.11
NPHP4-204ENST00000460696 JMJD7-PLA2G4BH0Y9G9 81 aa8.13□□□□□ -1.11
NPHP4-204ENST00000460696 DIRC1Q969H9 104 aa8.13□□□□□ -1.11
NPHP4-204ENST00000460696 CR1P17927 2039 aa8.13□□□□□ -1.11
NPHP4-204ENST00000460696 A0A087WYN8 130 aa8.12□□□□□ -1.11
NPHP4-204ENST00000460696 RBM3P98179 157 aaKnown RBP8.12□□□□□ -1.11
NPHP4-204ENST00000460696 RPL28P46779 137 aaKnown RBP8.12□□□□□ -1.11
NPHP4-204ENST00000460696 A0A1B0GX51 115 aa8.12□□□□□ -1.11
NPHP4-204ENST00000460696 hADV29S1A0JD25 119 aa8.12□□□□□ -1.11
NPHP4-204ENST00000460696 GIG44P09565 113 aaPredicted RBP8.11□□□□□ -1.11
NPHP4-204ENST00000460696 C6orf223Q8N319 242 aa8.11□□□□□ -1.11
NPHP4-204ENST00000460696 CELA1Q9UNI1 258 aa8.11□□□□□ -1.11
NPHP4-204ENST00000460696 Q8N3U1 123 aa8.11□□□□□ -1.11
NPHP4-204ENST00000460696 A0A1B0GUV1 79 aa8.1□□□□□ -1.11
NPHP4-204ENST00000460696 M0R2N4 97 aa8.1□□□□□ -1.11
NPHP4-204ENST00000460696 X6R8D5 127 aa8.1□□□□□ -1.11
NPHP4-204ENST00000460696 LY6G6CO95867 125 aa8.1□□□□□ -1.11
NPHP4-204ENST00000460696 NANOS2P60321 138 aaKnown RBP8.08□□□□□ -1.12
NPHP4-204ENST00000460696 Q6ZQY7 126 aa8.08□□□□□ -1.12
NPHP4-204ENST00000460696 COX7BP24311 80 aa8.08□□□□□ -1.12
NPHP4-204ENST00000460696 SBSPONQ8IVN8 264 aa8.08□□□□□ -1.12
NPHP4-204ENST00000460696 MXRA5Q9NR99 2828 aa8.08□□□□□ -1.12
NPHP4-204ENST00000460696 Q6ZTC4 211 aa8.08□□□□□ -1.12
NPHP4-204ENST00000460696 RMI2Q96E14 147 aa8.08□□□□□ -1.12
NPHP4-204ENST00000460696 CSMD2Q7Z408 3487 aa8.07□□□□□ -1.12
NPHP4-204ENST00000460696 ETDCA0A1B0GVM5 59 aa8.07□□□□□ -1.12
NPHP4-204ENST00000460696 CSNK1G2-AS1Q8NCQ2 148 aa8.07□□□□□ -1.12
NPHP4-204ENST00000460696 C19orf73Q9NVV2 129 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms