RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 ZNF625Q96I27 306 aaPredicted RBP11.26□□□□□ -0.61
NELFCD-201ENST00000460601 WWC2-AS2Q96NR7 200 aa11.26□□□□□ -0.61
NELFCD-201ENST00000460601 KMT2AQ03164 3969 aa11.25□□□□□ -0.61
NELFCD-201ENST00000460601 TRAV8-4A0A0B4J246 113 aa11.25□□□□□ -0.61
NELFCD-201ENST00000460601 IBA57-AS1B1ANH7 110 aa11.25□□□□□ -0.61
NELFCD-201ENST00000460601 MALP21145 153 aa11.25□□□□□ -0.61
NELFCD-201ENST00000460601 NAA38Q9BRA0 125 aaKnown RBP11.24□□□□□ -0.61
NELFCD-201ENST00000460601 COX7B2Q8TF08 81 aa11.24□□□□□ -0.61
NELFCD-201ENST00000460601 LINC00526Q96FQ7 95 aa11.24□□□□□ -0.61
NELFCD-201ENST00000460601 C1orf43Q9BWL3 253 aa11.24□□□□□ -0.61
NELFCD-201ENST00000460601 C2orf82Q6UX34 121 aa11.22□□□□□ -0.61
NELFCD-201ENST00000460601 A0A0J9YXY3 114 aa11.21□□□□□ -0.61
NELFCD-201ENST00000460601 CASC10Q5T4H9 136 aa11.21□□□□□ -0.61
NELFCD-201ENST00000460601 TM2D2Q9BX73 214 aa11.21□□□□□ -0.61
NELFCD-201ENST00000460601 NDUFA1O15239 70 aa11.2□□□□□ -0.62
NELFCD-201ENST00000460601 VPS13DQ5THJ4 4388 aa11.2□□□□□ -0.62
NELFCD-201ENST00000460601 F8W1H4 67 aa11.2□□□□□ -0.62
NELFCD-201ENST00000460601 J3QR89 54 aa11.2□□□□□ -0.62
NELFCD-201ENST00000460601 GCSHP23434 173 aa11.2□□□□□ -0.62
NELFCD-201ENST00000460601 FXYD2P54710 66 aa11.2□□□□□ -0.62
NELFCD-201ENST00000460601 KIAA0087Q14695 138 aa11.2□□□□□ -0.62
NELFCD-201ENST00000460601 C6orf223Q8N319 242 aa11.2□□□□□ -0.62
NELFCD-201ENST00000460601 SIGMAR1Q99720 223 aa11.2□□□□□ -0.62
NELFCD-201ENST00000460601 A0A0U1RRA0 63 aa11.19□□□□□ -0.62
NELFCD-201ENST00000460601 RPL24P83731 157 aaKnown RBP11.19□□□□□ -0.62
NELFCD-201ENST00000460601 C6orf226Q5I0X4 101 aa11.19□□□□□ -0.62
NELFCD-201ENST00000460601 TAL2Q16559 108 aa11.18□□□□□ -0.62
NELFCD-201ENST00000460601 DAND5Q8N907 189 aa11.18□□□□□ -0.62
NELFCD-201ENST00000460601 HIGD2BQ4VC39 106 aa11.18□□□□□ -0.62
NELFCD-201ENST00000460601 ADAMTSL4-AS1Q5T5F5 129 aa11.18□□□□□ -0.62
NELFCD-201ENST00000460601 Q8IZM0 81 aa11.18□□□□□ -0.62
NELFCD-201ENST00000460601 CEND1Q8N111 149 aa11.18□□□□□ -0.62
NELFCD-201ENST00000460601 LITAFQ99732 161 aa11.18□□□□□ -0.62
NELFCD-201ENST00000460601 PRSS2P07478 247 aa11.17□□□□□ -0.62
NELFCD-201ENST00000460601 M0R2N4 97 aa11.17□□□□□ -0.62
NELFCD-201ENST00000460601 LINC01561Q8N1V8 128 aa11.17□□□□□ -0.62
NELFCD-201ENST00000460601 C15orf56Q8N910 161 aa11.17□□□□□ -0.62
NELFCD-201ENST00000460601 HIST1H4GQ99525 98 aa11.17□□□□□ -0.62
NELFCD-201ENST00000460601 SPAG11BQ08648 103 aa11.16□□□□□ -0.62
NELFCD-201ENST00000460601 NBDYA0A0U1RRE5 68 aa11.15□□□□□ -0.62
NELFCD-201ENST00000460601 LECT2O14960 151 aa11.15□□□□□ -0.62
NELFCD-201ENST00000460601 NPC2P61916 151 aa11.15□□□□□ -0.62
NELFCD-201ENST00000460601 SRSF9Q13242 221 aaKnown RBP eCLIP11.15□□□□□ -0.62
NELFCD-201ENST00000460601 SPANXB1Q9NS25 103 aaPredicted RBP11.15□□□□□ -0.62
NELFCD-201ENST00000460601 APOMO95445 188 aa11.14□□□□□ -0.63
NELFCD-201ENST00000460601 C10orf25Q5T742 122 aa11.14□□□□□ -0.63
NELFCD-201ENST00000460601 A0A1B0GV72 72 aa11.14□□□□□ -0.63
NELFCD-201ENST00000460601 CKS1BP61024 79 aa11.14□□□□□ -0.63
NELFCD-201ENST00000460601 NHP2Q9NX24 153 aaKnown RBP11.14□□□□□ -0.63
NELFCD-201ENST00000460601 EIF4EBP3O60516 100 aaPredicted RBP11.13□□□□□ -0.63
NELFCD-201ENST00000460601 C9orf116Q5BN46 136 aaPredicted RBP11.13□□□□□ -0.63
NELFCD-201ENST00000460601 MEIG1Q5JSS6 88 aa11.13□□□□□ -0.63
NELFCD-201ENST00000460601 CFAP161Q6P656 301 aa11.13□□□□□ -0.63
NELFCD-201ENST00000460601 LY6G6CO95867 125 aa11.12□□□□□ -0.63
NELFCD-201ENST00000460601 K7ERJ3 54 aa11.12□□□□□ -0.63
NELFCD-201ENST00000460601 UNQ6190/PRO20217Q6UXQ8 127 aa11.12□□□□□ -0.63
NELFCD-201ENST00000460601 PFN2P35080 140 aa11.11□□□□□ -0.63
NELFCD-201ENST00000460601 HERV-K104P63124 156 aa11.11□□□□□ -0.63
NELFCD-201ENST00000460601 WFDC2Q14508 124 aa11.11□□□□□ -0.63
NELFCD-201ENST00000460601 USP17L23D6RBM5 183 aa11.09□□□□□ -0.63
NELFCD-201ENST00000460601 ZNF561-AS1K7EIQ3 104 aa11.09□□□□□ -0.63
NELFCD-201ENST00000460601 NTN5Q8WTR8 489 aaPredicted RBP11.09□□□□□ -0.63
NELFCD-201ENST00000460601 RMI2Q96E14 147 aa11.09□□□□□ -0.63
NELFCD-201ENST00000460601 A0A1B0GWB2 263 aa11.09□□□□□ -0.63
NELFCD-201ENST00000460601 TTC32Q5I0X7 151 aa11.08□□□□□ -0.64
NELFCD-201ENST00000460601 MUSTN1Q8IVN3 82 aa11.08□□□□□ -0.64
NELFCD-201ENST00000460601 HYDINQ4G0P3 5121 aa11.08□□□□□ -0.64
NELFCD-201ENST00000460601 C3orf84H3BNL1 204 aa11.08□□□□□ -0.64
NELFCD-201ENST00000460601 LINC00476Q8WZB0 136 aa11.08□□□□□ -0.64
NELFCD-201ENST00000460601 ERG28Q9UKR5 140 aa11.08□□□□□ -0.64
NELFCD-201ENST00000460601 DNAH2Q9P225 4427 aa11.07□□□□□ -0.64
NELFCD-201ENST00000460601 PSCAO43653 123 aa11.07□□□□□ -0.64
NELFCD-201ENST00000460601 PRO0461Q9UI25 63 aa11.07□□□□□ -0.64
NELFCD-201ENST00000460601 GVQW2A0A096LPI5 108 aaPredicted RBP11.06□□□□□ -0.64
NELFCD-201ENST00000460601 CXCL5P42830 114 aa11.06□□□□□ -0.64
NELFCD-201ENST00000460601 LINC00158P58513 81 aa11.06□□□□□ -0.64
NELFCD-201ENST00000460601 CIRBPQ14011 172 aaKnown RBP11.06□□□□□ -0.64
NELFCD-201ENST00000460601 MIR7-3HGQ8N6C7 128 aa11.06□□□□□ -0.64
NELFCD-201ENST00000460601 SPANXDQ9BXN6 97 aa11.06□□□□□ -0.64
NELFCD-201ENST00000460601 SPANXCQ9NY87 97 aa11.06□□□□□ -0.64
NELFCD-201ENST00000460601 H3BMG7 143 aa11.06□□□□□ -0.64
NELFCD-201ENST00000460601 TIMM17BO60830 172 aa11.06□□□□□ -0.64
NELFCD-201ENST00000460601 SOSTDC1Q6X4U4 206 aa11.06□□□□□ -0.64
NELFCD-201ENST00000460601 SVIPQ8NHG7 77 aa11.06□□□□□ -0.64
NELFCD-201ENST00000460601 CAMK2N2Q96S95 79 aa11.06□□□□□ -0.64
NELFCD-201ENST00000460601 C6orf48Q9UBA6 75 aa11.06□□□□□ -0.64
NELFCD-201ENST00000460601 SLPIP03973 132 aa11.05□□□□□ -0.64
NELFCD-201ENST00000460601 ETDBQ3ZM63 59 aa11.05□□□□□ -0.64
NELFCD-201ENST00000460601 Q6ZRU5 148 aa11.05□□□□□ -0.64
NELFCD-201ENST00000460601 Q6ZRN7 208 aaPredicted RBP11.05□□□□□ -0.64
NELFCD-201ENST00000460601 SFTA2Q6UW10 78 aa11.04□□□□□ -0.64
NELFCD-201ENST00000460601 Q6ZR54 194 aa11.03□□□□□ -0.64
NELFCD-201ENST00000460601 A4D1N5 150 aa11.03□□□□□ -0.64
NELFCD-201ENST00000460601 LINC00308Q8TCZ7 52 aa11.03□□□□□ -0.64
NELFCD-201ENST00000460601 MTURNQ8N3F0 131 aa11.02□□□□□ -0.65
NELFCD-201ENST00000460601 C2orf48Q96LS8 159 aa11□□□□□ -0.65
NELFCD-201ENST00000460601 TMEM238LA0A1B0GVL6 79 aa10.99□□□□□ -0.65
NELFCD-201ENST00000460601 A6NJY4 79 aa10.99□□□□□ -0.65
NELFCD-201ENST00000460601 CFC1BP0CG36 223 aa10.99□□□□□ -0.65
NELFCD-201ENST00000460601 CFC1P0CG37 223 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms