RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 LINC00208Q96KT6 92 aa3.86□□□□□ -1.79
HMGB4-202ENST00000458277 PRR15LQ9BU68 103 aa3.86□□□□□ -1.79
HMGB4-202ENST00000458277 SPTBN4Q9H254 2564 aa3.85□□□□□ -1.79
HMGB4-202ENST00000458277 ASCC3Q8N3C0 2202 aaKnown RBP3.85□□□□□ -1.79
HMGB4-202ENST00000458277 APELAP0DMC3 54 aa3.85□□□□□ -1.79
HMGB4-202ENST00000458277 GYPEP15421 78 aa3.85□□□□□ -1.79
HMGB4-202ENST00000458277 CCL3L1P16619 93 aa3.85□□□□□ -1.79
HMGB4-202ENST00000458277 CCL18P55774 89 aa3.85□□□□□ -1.79
HMGB4-202ENST00000458277 LINC00313P59037 77 aa3.85□□□□□ -1.79
HMGB4-202ENST00000458277 COX17Q14061 63 aa3.85□□□□□ -1.79
HMGB4-202ENST00000458277 LINC00242Q5T6M2 205 aa3.85□□□□□ -1.79
HMGB4-202ENST00000458277 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.85□□□□□ -1.79
HMGB4-202ENST00000458277 LINC00575Q6W349 94 aa3.85□□□□□ -1.79
HMGB4-202ENST00000458277 CHCHD7Q9BUK0 85 aa3.85□□□□□ -1.79
HMGB4-202ENST00000458277 CNOT1A5YKK6 2376 aaKnown RBP3.85□□□□□ -1.79
HMGB4-202ENST00000458277 DSCAML1Q8TD84 2053 aa3.84□□□□□ -1.79
HMGB4-202ENST00000458277 TRGV2A0A075B6R0 118 aa3.84□□□□□ -1.79
HMGB4-202ENST00000458277 CLPSL1A2RUU4 121 aa3.84□□□□□ -1.79
HMGB4-202ENST00000458277 CCL24O00175 119 aa3.84□□□□□ -1.79
HMGB4-202ENST00000458277 PRR9Q5T870 116 aa3.84□□□□□ -1.79
HMGB4-202ENST00000458277 Q6ZTI0 123 aa3.84□□□□□ -1.79
HMGB4-202ENST00000458277 NOTCH2NLQ7Z3S9 236 aa3.84□□□□□ -1.79
HMGB4-202ENST00000458277 DEFB108BQ8NET1 73 aa3.84□□□□□ -1.79
HMGB4-202ENST00000458277 TTTY12Q9BZ98 90 aa3.84□□□□□ -1.79
HMGB4-202ENST00000458277 DPM3Q9P2X0 92 aa3.84□□□□□ -1.79
HMGB4-202ENST00000458277 RP1P56715 2156 aa3.84□□□□□ -1.79
HMGB4-202ENST00000458277 SPEGQ15772 3267 aa3.83□□□□□ -1.8
HMGB4-202ENST00000458277 IGHV7-81A0A0B4J1V7 117 aa3.83□□□□□ -1.8
HMGB4-202ENST00000458277 IGHV3-72A0A0B4J1Y9 119 aa3.83□□□□□ -1.8
HMGB4-202ENST00000458277 A0A1W2PNU3 283 aaPredicted RBP3.83□□□□□ -1.8
HMGB4-202ENST00000458277 NDUFA4O00483 81 aa3.83□□□□□ -1.8
HMGB4-202ENST00000458277 IGHV1-46P01743 117 aa3.83□□□□□ -1.8
HMGB4-202ENST00000458277 IGKV4-1P06312 121 aa3.83□□□□□ -1.8
HMGB4-202ENST00000458277 HIGD2BQ4VC39 106 aa3.83□□□□□ -1.8
HMGB4-202ENST00000458277 DEFB124Q8NES8 71 aa3.83□□□□□ -1.8
HMGB4-202ENST00000458277 LINC00476Q8WZB0 136 aa3.83□□□□□ -1.8
HMGB4-202ENST00000458277 FAM104AQ969W3 186 aa3.83□□□□□ -1.8
HMGB4-202ENST00000458277 ZNRD1Q9P1U0 126 aa3.83□□□□□ -1.8
HMGB4-202ENST00000458277 AHCTF1Q8WYP5 2266 aa3.83□□□□□ -1.8
HMGB4-202ENST00000458277 AKAP13Q12802 2813 aa3.83□□□□□ -1.8
HMGB4-202ENST00000458277 FRYQ5TBA9 3013 aa3.82□□□□□ -1.8
HMGB4-202ENST00000458277 RTTNQ86VV8 2226 aa3.82□□□□□ -1.8
HMGB4-202ENST00000458277 FREM1Q5H8C1 2179 aa3.82□□□□□ -1.8
HMGB4-202ENST00000458277 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.82□□□□□ -1.8
HMGB4-202ENST00000458277 IGHV3-35A0A0C4DH35 117 aa3.82□□□□□ -1.8
HMGB4-202ENST00000458277 FBXL19-AS1Q494R0 122 aa3.82□□□□□ -1.8
HMGB4-202ENST00000458277 MINOS1Q5TGZ0 78 aa3.82□□□□□ -1.8
HMGB4-202ENST00000458277 RETNLBQ9BQ08 111 aa3.82□□□□□ -1.8
HMGB4-202ENST00000458277 ZZEF1O43149 2961 aa3.82□□□□□ -1.8
HMGB4-202ENST00000458277 FREM2Q5SZK8 3169 aa3.81□□□□□ -1.8
HMGB4-202ENST00000458277 COL27A1Q8IZC6 1860 aaPredicted RBP3.81□□□□□ -1.8
HMGB4-202ENST00000458277 IGHV3OR16-12A0A075B7B8 117 aa3.81□□□□□ -1.8
HMGB4-202ENST00000458277 IGHV3-73A0A0B4J1V6 119 aa3.81□□□□□ -1.8
HMGB4-202ENST00000458277 IGHV3-53P01767 116 aa3.81□□□□□ -1.8
HMGB4-202ENST00000458277 MOBPQ13875 183 aa3.81□□□□□ -1.8
HMGB4-202ENST00000458277 WFDC10AQ9H1F0 79 aa3.81□□□□□ -1.8
HMGB4-202ENST00000458277 LINC01558Q9Y6Z2 57 aa3.81□□□□□ -1.8
HMGB4-202ENST00000458277 MINOS1-NBL1R4GNA1 71 aa3.81□□□□□ -1.8
HMGB4-202ENST00000458277 CEP295Q9C0D2 2601 aa3.81□□□□□ -1.8
HMGB4-202ENST00000458277 SPTBN2O15020 2390 aa3.81□□□□□ -1.8
HMGB4-202ENST00000458277 WDFY3Q8IZQ1 3526 aa3.81□□□□□ -1.8
HMGB4-202ENST00000458277 TNCP24821 2201 aa3.8□□□□□ -1.8
HMGB4-202ENST00000458277 SEC16AO15027 2179 aa3.8□□□□□ -1.8
HMGB4-202ENST00000458277 ITPR1Q14643 2758 aa3.8□□□□□ -1.8
HMGB4-202ENST00000458277 IGHV4-30-2A0A087WSY4 118 aa3.8□□□□□ -1.8
HMGB4-202ENST00000458277 LRCOL1A6NCL2 159 aa3.8□□□□□ -1.8
HMGB4-202ENST00000458277 H3BUA1 57 aa3.8□□□□□ -1.8
HMGB4-202ENST00000458277 BSPH1Q075Z2 132 aa3.8□□□□□ -1.8
HMGB4-202ENST00000458277 LINC00467Q9BRT7 94 aa3.8□□□□□ -1.8
HMGB4-202ENST00000458277 ARFGEF3Q5TH69 2177 aa3.8□□□□□ -1.8
HMGB4-202ENST00000458277 ASPMQ8IZT6 3477 aa3.8□□□□□ -1.8
HMGB4-202ENST00000458277 KMT2BQ9UMN6 2715 aaPredicted RBP3.79□□□□□ -1.8
HMGB4-202ENST00000458277 DMXL2Q8TDJ6 3036 aa3.79□□□□□ -1.8
HMGB4-202ENST00000458277 NCOR2Q9Y618 2525 aa3.79□□□□□ -1.8
HMGB4-202ENST00000458277 PINLYPA6NC86 204 aa3.79□□□□□ -1.8
HMGB4-202ENST00000458277 PRR3P79522 188 aaKnown RBP3.79□□□□□ -1.8
HMGB4-202ENST00000458277 COX6A2Q02221 97 aa3.79□□□□□ -1.8
HMGB4-202ENST00000458277 C6orf99Q4VX62 202 aa3.79□□□□□ -1.8
HMGB4-202ENST00000458277 RNASE13Q5GAN3 156 aaKnown RBP3.79□□□□□ -1.8
HMGB4-202ENST00000458277 ZNF843Q8N446 348 aa3.79□□□□□ -1.8
HMGB4-202ENST00000458277 USMG5Q96IX5 58 aa3.79□□□□□ -1.8
HMGB4-202ENST00000458277 KCNQ1DNQ9H478 68 aa3.79□□□□□ -1.8
HMGB4-202ENST00000458277 XAGE1AQ9HD64 81 aa3.79□□□□□ -1.8
HMGB4-202ENST00000458277 CFAP47Q6ZTR5 3102 aa3.79□□□□□ -1.8
HMGB4-202ENST00000458277 IGHV6-1A0A0B4J1U7 121 aa3.78□□□□□ -1.8
HMGB4-202ENST00000458277 PRB4P10163 310 aaPredicted RBP3.78□□□□□ -1.8
HMGB4-202ENST00000458277 SPINK14Q6IE38 97 aa3.78□□□□□ -1.8
HMGB4-202ENST00000458277 Q8IZM0 81 aa3.78□□□□□ -1.8
HMGB4-202ENST00000458277 CNEP1R1Q8N9A8 125 aa3.78□□□□□ -1.8
HMGB4-202ENST00000458277 NBEAQ8NFP9 2946 aa3.77□□□□□ -1.81
HMGB4-202ENST00000458277 APC2O95996 2303 aa3.77□□□□□ -1.81
HMGB4-202ENST00000458277 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.77□□□□□ -1.81
HMGB4-202ENST00000458277 IGHV3-23P01764 117 aa3.77□□□□□ -1.81
HMGB4-202ENST00000458277 PLA2G2AP14555 144 aa3.77□□□□□ -1.81
HMGB4-202ENST00000458277 CNBPP62633 177 aaKnown RBP3.77□□□□□ -1.81
HMGB4-202ENST00000458277 SPAG11BQ08648 103 aa3.77□□□□□ -1.81
HMGB4-202ENST00000458277 S4R3C0 116 aa3.77□□□□□ -1.81
HMGB4-202ENST00000458277 CHD8Q9HCK8 2581 aa3.77□□□□□ -1.81
HMGB4-202ENST00000458277 USP24Q9UPU5 2620 aa3.76□□□□□ -1.81
HMGB4-202ENST00000458277 IGHV3-66A0A0C4DH42 116 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms