RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 A0A0J9YWU9 116 aa11.66□□□□□ -0.54
LSS-205ENST00000457828 MUC3AQ02505 3323 aa11.66□□□□□ -0.54
LSS-205ENST00000457828 FAM240AA0A1B0GVK7 77 aa11.66□□□□□ -0.54
LSS-205ENST00000457828 UQCRQO14949 82 aa11.66□□□□□ -0.54
LSS-205ENST00000457828 ITPR2Q14571 2701 aa11.66□□□□□ -0.54
LSS-205ENST00000457828 CDC42SE2Q9NRR3 84 aa11.65□□□□□ -0.54
LSS-205ENST00000457828 KLK9Q2XQG4 91 aa11.65□□□□□ -0.54
LSS-205ENST00000457828 NANOS2P60321 138 aaKnown RBP11.64□□□□□ -0.55
LSS-205ENST00000457828 SMIM11BQ8TCY0 68 aa11.64□□□□□ -0.55
LSS-205ENST00000457828 TRAV10A0A0B4J240 114 aa11.64□□□□□ -0.55
LSS-205ENST00000457828 C3orf22Q8N5N4 141 aa11.64□□□□□ -0.55
LSS-205ENST00000457828 hADV29S1A0JD25 119 aa11.63□□□□□ -0.55
LSS-205ENST00000457828 M0QXV9 152 aa11.63□□□□□ -0.55
LSS-205ENST00000457828 DMDP11532 3685 aa11.63□□□□□ -0.55
LSS-205ENST00000457828 ZFHX4Q86UP3 3567 aa11.63□□□□□ -0.55
LSS-205ENST00000457828 IMUPQ9GZP8 106 aa11.61□□□□□ -0.55
LSS-205ENST00000457828 EIF4EBP3O60516 100 aaPredicted RBP11.61□□□□□ -0.55
LSS-205ENST00000457828 TRAV23DV6A0A075B6W5 121 aa11.6□□□□□ -0.55
LSS-205ENST00000457828 KPRPQ5T749 579 aaPredicted RBP11.6□□□□□ -0.55
LSS-205ENST00000457828 C1orf158Q8N1D5 194 aa11.6□□□□□ -0.55
LSS-205ENST00000457828 DSCR8Q96T75 97 aa11.6□□□□□ -0.55
LSS-205ENST00000457828 TRBV6-8A0A0A6YYG3 113 aa11.6□□□□□ -0.55
LSS-205ENST00000457828 J3KT08 172 aa11.6□□□□□ -0.55
LSS-205ENST00000457828 LITAFQ99732 161 aa11.59□□□□□ -0.55
LSS-205ENST00000457828 KRTAP1-1Q07627 177 aa11.59□□□□□ -0.55
LSS-205ENST00000457828 IBA57-AS1B1ANH7 110 aa11.59□□□□□ -0.55
LSS-205ENST00000457828 UBR5O95071 2799 aaPredicted RBP11.58□□□□□ -0.56
LSS-205ENST00000457828 TRBV6-4A0A1B0GX49 114 aa11.58□□□□□ -0.56
LSS-205ENST00000457828 CAMK2N2Q96S95 79 aa11.58□□□□□ -0.56
LSS-205ENST00000457828 GHRHP01286 108 aa11.57□□□□□ -0.56
LSS-205ENST00000457828 NOTCH1P46531 2555 aa11.57□□□□□ -0.56
LSS-205ENST00000457828 A0A087WYN8 130 aa11.57□□□□□ -0.56
LSS-205ENST00000457828 JMJD7-PLA2G4BH0Y9G9 81 aa11.57□□□□□ -0.56
LSS-205ENST00000457828 SOSTDC1Q6X4U4 206 aa11.56□□□□□ -0.56
LSS-205ENST00000457828 A0A087WVE0 104 aa11.56□□□□□ -0.56
LSS-205ENST00000457828 LINC00269Q8N2A0 174 aa11.56□□□□□ -0.56
LSS-205ENST00000457828 IGLV4-60A0A075B6I1 120 aa11.56□□□□□ -0.56
LSS-205ENST00000457828 NKAPP1Q8N9T2 125 aa11.56□□□□□ -0.56
LSS-205ENST00000457828 C11orf72Q8NBR9 251 aa11.56□□□□□ -0.56
LSS-205ENST00000457828 BEAN1Q3B7T3 259 aa11.55□□□□□ -0.56
LSS-205ENST00000457828 LY6G6CO95867 125 aa11.54□□□□□ -0.56
LSS-205ENST00000457828 LINC00337Q8N6G1 96 aa11.54□□□□□ -0.56
LSS-205ENST00000457828 TMEM256-PLSCR3K7ERE1 68 aa11.54□□□□□ -0.56
LSS-205ENST00000457828 COX7CP15954 63 aa11.53□□□□□ -0.56
LSS-205ENST00000457828 RPL28P46779 137 aaKnown RBP11.53□□□□□ -0.56
LSS-205ENST00000457828 NTM-AS1Q6ZSK4 140 aa11.53□□□□□ -0.56
LSS-205ENST00000457828 Q6ZTC4 211 aa11.53□□□□□ -0.56
LSS-205ENST00000457828 IGLV5-39A0A0G2JS06 123 aa11.53□□□□□ -0.56
LSS-205ENST00000457828 M0R2N4 97 aa11.53□□□□□ -0.56
LSS-205ENST00000457828 NHLRC4P0CG21 123 aaPredicted RBP11.53□□□□□ -0.56
LSS-205ENST00000457828 WFDC9Q8NEX5 89 aa11.53□□□□□ -0.56
LSS-205ENST00000457828 ITPR1Q14643 2758 aa11.52□□□□□ -0.56
LSS-205ENST00000457828 USP17L23D6RBM5 183 aa11.52□□□□□ -0.56
LSS-205ENST00000457828 RPL18AQ02543 176 aaKnown RBP11.52□□□□□ -0.56
LSS-205ENST00000457828 C6orf99Q4VX62 202 aa11.52□□□□□ -0.56
LSS-205ENST00000457828 CXCL5P42830 114 aa11.52□□□□□ -0.57
LSS-205ENST00000457828 PRR3P79522 188 aaKnown RBP11.52□□□□□ -0.57
LSS-205ENST00000457828 ENHOQ6UWT2 76 aa11.52□□□□□ -0.57
LSS-205ENST00000457828 FAM218AQ96MZ4 157 aa11.52□□□□□ -0.57
LSS-205ENST00000457828 RBM3P98179 157 aaKnown RBP11.52□□□□□ -0.57
LSS-205ENST00000457828 SPAG11BQ08648 103 aa11.52□□□□□ -0.57
LSS-205ENST00000457828 C20orf197Q8N268 126 aa11.52□□□□□ -0.57
LSS-205ENST00000457828 LINC00526Q96FQ7 95 aa11.52□□□□□ -0.57
LSS-205ENST00000457828 LINC00959A0A1B0GUT2 108 aa11.51□□□□□ -0.57
LSS-205ENST00000457828 REG3AQ06141 175 aa11.51□□□□□ -0.57
LSS-205ENST00000457828 UBE2BP63146 152 aa11.51□□□□□ -0.57
LSS-205ENST00000457828 NBEAL1Q6ZS30 2694 aa11.51□□□□□ -0.57
LSS-205ENST00000457828 TRBV7-7A0A0K0K1E9 115 aa11.5□□□□□ -0.57
LSS-205ENST00000457828 CSDC2Q9Y534 153 aaKnown RBP11.5□□□□□ -0.57
LSS-205ENST00000457828 CHCHD10Q8WYQ3 142 aaPredicted RBP11.49□□□□□ -0.57
LSS-205ENST00000457828 HIGD2BQ4VC39 106 aa11.48□□□□□ -0.57
LSS-205ENST00000457828 UPK3BQ9BT76 320 aa11.48□□□□□ -0.57
LSS-205ENST00000457828 IGLV5-45A0A087WSX0 123 aa11.47□□□□□ -0.57
LSS-205ENST00000457828 SERP2Q8N6R1 65 aa11.47□□□□□ -0.57
LSS-205ENST00000457828 LINC00846Q9NV44 126 aa11.46□□□□□ -0.57
LSS-205ENST00000457828 C9orf116Q5BN46 136 aaPredicted RBP11.45□□□□□ -0.58
LSS-205ENST00000457828 XAGE1AQ9HD64 81 aa11.45□□□□□ -0.58
LSS-205ENST00000457828 LOC107984640A0A0U1RRK4 108 aa11.45□□□□□ -0.58
LSS-205ENST00000457828 SCXQ7RTU7 201 aa11.44□□□□□ -0.58
LSS-205ENST00000457828 DEFB105AQ8NG35 78 aa11.44□□□□□ -0.58
LSS-205ENST00000457828 A0A087WZ39 114 aa11.44□□□□□ -0.58
LSS-205ENST00000457828 PPDPFQ9H3Y8 114 aa11.43□□□□□ -0.58
LSS-205ENST00000457828 LELP1Q5T871 98 aa11.42□□□□□ -0.58
LSS-205ENST00000457828 SVIPQ8NHG7 77 aa11.42□□□□□ -0.58
LSS-205ENST00000457828 Q6JHZ5 121 aa11.42□□□□□ -0.58
LSS-205ENST00000457828 LAMA5O15230 3695 aa11.42□□□□□ -0.58
LSS-205ENST00000457828 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.41□□□□□ -0.58
LSS-205ENST00000457828 IGKV2-24A0A0C4DH68 120 aa11.41□□□□□ -0.58
LSS-205ENST00000457828 KRTAP10-3P60369 221 aa11.41□□□□□ -0.58
LSS-205ENST00000457828 SMCR5Q8TEV8 140 aa11.41□□□□□ -0.58
LSS-205ENST00000457828 NUPR2A6NF83 97 aa11.41□□□□□ -0.58
LSS-205ENST00000457828 DIRC1Q969H9 104 aa11.4□□□□□ -0.58
LSS-205ENST00000457828 FHL2Q14192 279 aa11.4□□□□□ -0.58
LSS-205ENST00000457828 Q6ZQY7 126 aa11.4□□□□□ -0.58
LSS-205ENST00000457828 IGHV3OR16-9A0A0B4J2B5 98 aa11.39□□□□□ -0.59
LSS-205ENST00000457828 UTP20O75691 2785 aaKnown RBP11.38□□□□□ -0.59
LSS-205ENST00000457828 Q8IZM0 81 aa11.38□□□□□ -0.59
LSS-205ENST00000457828 CD164L2Q6UWJ8 174 aa11.38□□□□□ -0.59
LSS-205ENST00000457828 CCKP06307 115 aa11.37□□□□□ -0.59
LSS-205ENST00000457828 A8MTW9 85 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms