RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 CD24P25063 80 aa3.61□□□□□ -1.83
VPS41-209ENST00000457055 C14orf132Q9NPU4 83 aa3.61□□□□□ -1.83
VPS41-209ENST00000457055 TMEM14BQ9NUH8 114 aa3.61□□□□□ -1.83
VPS41-209ENST00000457055 NOTCH3Q9UM47 2321 aa3.61□□□□□ -1.83
VPS41-209ENST00000457055 TET2Q6N021 2002 aaPredicted RBP3.61□□□□□ -1.83
VPS41-209ENST00000457055 IGLV11-55A0A075B6I3 123 aa3.6□□□□□ -1.83
VPS41-209ENST00000457055 TRAV23DV6A0A075B6W5 121 aa3.6□□□□□ -1.83
VPS41-209ENST00000457055 IGHV3-15A0A0B4J1V0 119 aa3.6□□□□□ -1.83
VPS41-209ENST00000457055 IGHV1-3A0A0C4DH29 117 aa3.6□□□□□ -1.83
VPS41-209ENST00000457055 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
VPS41-209ENST00000457055 IFI6P09912 130 aa3.6□□□□□ -1.83
VPS41-209ENST00000457055 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
VPS41-209ENST00000457055 MOBPQ13875 183 aa3.6□□□□□ -1.83
VPS41-209ENST00000457055 KLF14Q8TD94 323 aaPredicted RBP3.6□□□□□ -1.83
VPS41-209ENST00000457055 CUBNO60494 3623 aa3.6□□□□□ -1.83
VPS41-209ENST00000457055 FLNAP21333 2647 aaKnown RBP3.59□□□□□ -1.83
VPS41-209ENST00000457055 MUC4Q99102 2169 aa3.59□□□□□ -1.83
VPS41-209ENST00000457055 TRBV30A0A0K0K1B3 111 aa3.59□□□□□ -1.83
VPS41-209ENST00000457055 A0A1B0GVX0 72 aa3.59□□□□□ -1.83
VPS41-209ENST00000457055 S100A3P33764 101 aa3.59□□□□□ -1.83
VPS41-209ENST00000457055 GDF5OSQ5U4N7 250 aa3.59□□□□□ -1.83
VPS41-209ENST00000457055 FAM27BQ5VT28 67 aa3.59□□□□□ -1.83
VPS41-209ENST00000457055 LYZL1Q6UWQ5 148 aa3.59□□□□□ -1.83
VPS41-209ENST00000457055 Q6ZQT0 140 aa3.59□□□□□ -1.83
VPS41-209ENST00000457055 LYZL2Q7Z4W2 148 aa3.59□□□□□ -1.83
VPS41-209ENST00000457055 Q8NBF4 154 aa3.59□□□□□ -1.83
VPS41-209ENST00000457055 C1orf64Q8NEQ6 169 aa3.59□□□□□ -1.83
VPS41-209ENST00000457055 RPP21Q9H633 154 aaKnown RBP3.59□□□□□ -1.83
VPS41-209ENST00000457055 ICOSQ9Y6W8 199 aa3.59□□□□□ -1.83
VPS41-209ENST00000457055 U3KQK5 164 aa3.59□□□□□ -1.83
VPS41-209ENST00000457055 VPS13CQ709C8 3753 aa3.59□□□□□ -1.84
VPS41-209ENST00000457055 HEATR1Q9H583 2144 aaKnown RBP3.58□□□□□ -1.84
VPS41-209ENST00000457055 ZNF407Q9C0G0 2248 aa3.58□□□□□ -1.84
VPS41-209ENST00000457055 TRBV6-8A0A0A6YYG3 113 aa3.58□□□□□ -1.84
VPS41-209ENST00000457055 SMIM27A0A1W2PRY6 76 aa3.58□□□□□ -1.84
VPS41-209ENST00000457055 A6NDX4 124 aa3.58□□□□□ -1.84
VPS41-209ENST00000457055 D6R8Y8 96 aa3.58□□□□□ -1.84
VPS41-209ENST00000457055 H7C2G1 150 aa3.58□□□□□ -1.84
VPS41-209ENST00000457055 H7C423 109 aa3.58□□□□□ -1.84
VPS41-209ENST00000457055 DEFA4P12838 97 aa3.58□□□□□ -1.84
VPS41-209ENST00000457055 IGLV3-21P80748 117 aaPredicted RBP3.58□□□□□ -1.84
VPS41-209ENST00000457055 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
VPS41-209ENST00000457055 MUSTN1Q8IVN3 82 aa3.58□□□□□ -1.84
VPS41-209ENST00000457055 Q8N9W7 124 aa3.58□□□□□ -1.84
VPS41-209ENST00000457055 FGF22Q9HCT0 170 aa3.58□□□□□ -1.84
VPS41-209ENST00000457055 NSD1Q96L73 2696 aaPredicted RBP3.58□□□□□ -1.84
VPS41-209ENST00000457055 IGLV3-16A0A075B6K0 115 aa3.57□□□□□ -1.84
VPS41-209ENST00000457055 CTXND1A0A1B0GTU2 59 aa3.57□□□□□ -1.84
VPS41-209ENST00000457055 CLPSP04118 112 aa3.57□□□□□ -1.84
VPS41-209ENST00000457055 ARMS2P0C7Q2 107 aa3.57□□□□□ -1.84
VPS41-209ENST00000457055 CFC1BP0CG36 223 aa3.57□□□□□ -1.84
VPS41-209ENST00000457055 CFC1P0CG37 223 aa3.57□□□□□ -1.84
VPS41-209ENST00000457055 NOTCH1P46531 2555 aa3.57□□□□□ -1.84
VPS41-209ENST00000457055 NNATQ16517 81 aa3.57□□□□□ -1.84
VPS41-209ENST00000457055 DEFB133Q30KQ1 61 aa3.57□□□□□ -1.84
VPS41-209ENST00000457055 ZNF525Q8N782 197 aa3.57□□□□□ -1.84
VPS41-209ENST00000457055 LINC01006Q8NI28 216 aa3.57□□□□□ -1.84
VPS41-209ENST00000457055 IMMP1LQ96LU5 166 aa3.57□□□□□ -1.84
VPS41-209ENST00000457055 MXRA5Q9NR99 2828 aa3.57□□□□□ -1.84
VPS41-209ENST00000457055 CDC42SE2Q9NRR3 84 aa3.57□□□□□ -1.84
VPS41-209ENST00000457055 S4R3C0 116 aa3.57□□□□□ -1.84
VPS41-209ENST00000457055 TRAV12-3A0A0B4J271 114 aa3.56□□□□□ -1.84
VPS41-209ENST00000457055 LHBP01229 141 aa3.56□□□□□ -1.84
VPS41-209ENST00000457055 INSP01308 110 aa3.56□□□□□ -1.84
VPS41-209ENST00000457055 TFF1P04155 84 aa3.56□□□□□ -1.84
VPS41-209ENST00000457055 SAA2P0DJI9 122 aaPredicted RBP3.56□□□□□ -1.84
VPS41-209ENST00000457055 Q6ZR03 302 aa3.56□□□□□ -1.84
VPS41-209ENST00000457055 MUC7Q8TAX7 377 aa3.56□□□□□ -1.84
VPS41-209ENST00000457055 CIRBP-AS1Q8TBR5 109 aa3.56□□□□□ -1.84
VPS41-209ENST00000457055 V9GYV3 84 aa3.56□□□□□ -1.84
VPS41-209ENST00000457055 INTS1Q8N201 2190 aaKnown RBP3.56□□□□□ -1.84
VPS41-209ENST00000457055 DOCK10Q96BY6 2186 aa3.56□□□□□ -1.84
VPS41-209ENST00000457055 NCOA6Q14686 2063 aaPredicted RBP3.56□□□□□ -1.84
VPS41-209ENST00000457055 NBEAL2Q6ZNJ1 2754 aa3.56□□□□□ -1.84
VPS41-209ENST00000457055 TLN2Q9Y4G6 2542 aa3.55□□□□□ -1.84
VPS41-209ENST00000457055 LOC101927531A0A1B0GV80 90 aa3.55□□□□□ -1.84
VPS41-209ENST00000457055 C10orf142B7Z368 130 aa3.55□□□□□ -1.84
VPS41-209ENST00000457055 H3BPC8 53 aa3.55□□□□□ -1.84
VPS41-209ENST00000457055 PSCAO43653 123 aa3.55□□□□□ -1.84
VPS41-209ENST00000457055 DNAL4O96015 105 aa3.55□□□□□ -1.84
VPS41-209ENST00000457055 TLX1NBP0CAT3 122 aa3.55□□□□□ -1.84
VPS41-209ENST00000457055 DNAH10OSP0CZ25 163 aa3.55□□□□□ -1.84
VPS41-209ENST00000457055 EIF4EBP1Q13541 118 aaPredicted RBP3.55□□□□□ -1.84
VPS41-209ENST00000457055 SPANXN5Q5MJ07 72 aa3.55□□□□□ -1.84
VPS41-209ENST00000457055 LYPD6Q86Y78 171 aa3.55□□□□□ -1.84
VPS41-209ENST00000457055 TMEM254Q8TBM7 123 aa3.55□□□□□ -1.84
VPS41-209ENST00000457055 CYYR1Q96J86 154 aa3.55□□□□□ -1.84
VPS41-209ENST00000457055 C22orf24Q9Y442 160 aa3.55□□□□□ -1.84
VPS41-209ENST00000457055 SEC16AO15027 2179 aa3.55□□□□□ -1.84
VPS41-209ENST00000457055 IGKV1D-42A0A075B6H8 117 aa3.54□□□□□ -1.84
VPS41-209ENST00000457055 A0A087WSZ3 146 aa3.54□□□□□ -1.84
VPS41-209ENST00000457055 COX6B1P14854 86 aa3.54□□□□□ -1.84
VPS41-209ENST00000457055 MIR22HGQ0VDD5 57 aa3.54□□□□□ -1.84
VPS41-209ENST00000457055 NTM-AS1Q6ZSK4 140 aa3.54□□□□□ -1.84
VPS41-209ENST00000457055 SMIM29Q86T20 159 aa3.54□□□□□ -1.84
VPS41-209ENST00000457055 MIR7-3HGQ8N6C7 128 aa3.54□□□□□ -1.84
VPS41-209ENST00000457055 SNURFQ9Y675 71 aa3.54□□□□□ -1.84
VPS41-209ENST00000457055 MPDZO75970 2070 aa3.54□□□□□ -1.84
VPS41-209ENST00000457055 ANK3Q12955 4377 aaKnown RBP3.54□□□□□ -1.84
VPS41-209ENST00000457055 SPTBP11277 2137 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms