RNA–Protein interactions for RNA: ENST00000456957.2

PKNOX1-204, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 3

Gene PKNOX1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-204ENST00000456957 UNQ6190/PRO20217Q6UXQ8 127 aa10.49□□□□□ -0.73
PKNOX1-204ENST00000456957 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.48□□□□□ -0.73
PKNOX1-204ENST00000456957 E9PLD3 99 aa10.48□□□□□ -0.73
PKNOX1-204ENST00000456957 LEPROTO15243 131 aa10.48□□□□□ -0.73
PKNOX1-204ENST00000456957 TSPEAR-AS2P59090 65 aa10.48□□□□□ -0.73
PKNOX1-204ENST00000456957 CKS1BP61024 79 aa10.48□□□□□ -0.73
PKNOX1-204ENST00000456957 JOSD1Q15040 202 aaPredicted RBP10.48□□□□□ -0.73
PKNOX1-204ENST00000456957 CDPF1Q6NVV7 123 aa10.48□□□□□ -0.73
PKNOX1-204ENST00000456957 PGPEP1Q9NXJ5 209 aa10.48□□□□□ -0.73
PKNOX1-204ENST00000456957 CXCL5P42830 114 aa10.47□□□□□ -0.73
PKNOX1-204ENST00000456957 LINC01620Q4KN68 170 aa10.47□□□□□ -0.73
PKNOX1-204ENST00000456957 PLEKHB2Q96CS7 222 aa10.47□□□□□ -0.73
PKNOX1-204ENST00000456957 MAJINQ3KP22 176 aa10.46□□□□□ -0.73
PKNOX1-204ENST00000456957 ANKRD39Q53RE8 183 aa10.46□□□□□ -0.73
PKNOX1-204ENST00000456957 C9orf163Q8N9P6 203 aa10.46□□□□□ -0.73
PKNOX1-204ENST00000456957 C6orf48Q9UBA6 75 aa10.46□□□□□ -0.73
PKNOX1-204ENST00000456957 HECTD4Q9Y4D8 3996 aa10.45□□□□□ -0.74
PKNOX1-204ENST00000456957 IGKV2D-26A0A0A0MRZ7 120 aa10.45□□□□□ -0.74
PKNOX1-204ENST00000456957 J3QQQ9 107 aa10.45□□□□□ -0.74
PKNOX1-204ENST00000456957 ZNF625Q96I27 306 aaPredicted RBP10.45□□□□□ -0.74
PKNOX1-204ENST00000456957 TRBV30A0A0K0K1B3 111 aa10.44□□□□□ -0.74
PKNOX1-204ENST00000456957 PYY3Q5JQD4 70 aa10.44□□□□□ -0.74
PKNOX1-204ENST00000456957 LGALS3P17931 250 aaKnown RBP10.43□□□□□ -0.74
PKNOX1-204ENST00000456957 GCSHP23434 173 aa10.43□□□□□ -0.74
PKNOX1-204ENST00000456957 RNF151Q2KHN1 245 aa10.43□□□□□ -0.74
PKNOX1-204ENST00000456957 C9orf116Q5BN46 136 aaPredicted RBP10.42□□□□□ -0.74
PKNOX1-204ENST00000456957 NDUFA12Q9UI09 145 aa10.42□□□□□ -0.74
PKNOX1-204ENST00000456957 DNAH5Q8TE73 4624 aa10.42□□□□□ -0.74
PKNOX1-204ENST00000456957 LOC105371267A0A1B0GV96 52 aa10.41□□□□□ -0.74
PKNOX1-204ENST00000456957 C16orf90A8MZG2 172 aa10.41□□□□□ -0.74
PKNOX1-204ENST00000456957 SFTA2Q6UW10 78 aa10.41□□□□□ -0.74
PKNOX1-204ENST00000456957 HSBP1L1C9JCN9 74 aa10.4□□□□□ -0.74
PKNOX1-204ENST00000456957 NMUP48645 174 aa10.4□□□□□ -0.74
PKNOX1-204ENST00000456957 KRTAP10-1P60331 282 aa10.4□□□□□ -0.74
PKNOX1-204ENST00000456957 TTTY13Q9BZ97 58 aa10.4□□□□□ -0.74
PKNOX1-204ENST00000456957 MYMXA0A1B0GTQ4 84 aa10.39□□□□□ -0.75
PKNOX1-204ENST00000456957 SDIM1Q6ZPB5 146 aa10.39□□□□□ -0.75
PKNOX1-204ENST00000456957 HERC2O95714 4834 aa10.38□□□□□ -0.75
PKNOX1-204ENST00000456957 LOC107984640A0A0U1RRK4 108 aa10.38□□□□□ -0.75
PKNOX1-204ENST00000456957 TLX1NBP0CAT3 122 aa10.37□□□□□ -0.75
PKNOX1-204ENST00000456957 HERV-K104P63124 156 aa10.37□□□□□ -0.75
PKNOX1-204ENST00000456957 RPL18AQ02543 176 aaKnown RBP10.37□□□□□ -0.75
PKNOX1-204ENST00000456957 PCP2Q8IVA1 136 aa10.37□□□□□ -0.75
PKNOX1-204ENST00000456957 VAMP8Q9BV40 100 aa10.37□□□□□ -0.75
PKNOX1-204ENST00000456957 ERG28Q9UKR5 140 aa10.37□□□□□ -0.75
PKNOX1-204ENST00000456957 PKHD1P08F94 4074 aa10.36□□□□□ -0.75
PKNOX1-204ENST00000456957 A0A096LNI7 61 aa10.36□□□□□ -0.75
PKNOX1-204ENST00000456957 NDUFC2-KCTD14E9PQ53 114 aa10.36□□□□□ -0.75
PKNOX1-204ENST00000456957 PFN2P35080 140 aa10.36□□□□□ -0.75
PKNOX1-204ENST00000456957 PKIGQ9Y2B9 76 aa10.36□□□□□ -0.75
PKNOX1-204ENST00000456957 PAM16Q9Y3D7 125 aa10.36□□□□□ -0.75
PKNOX1-204ENST00000456957 ZNF815PA8K554 130 aa10.35□□□□□ -0.75
PKNOX1-204ENST00000456957 CHTF8P0CG12 524 aa10.35□□□□□ -0.75
PKNOX1-204ENST00000456957 Q6ZRP5 223 aa10.35□□□□□ -0.75
PKNOX1-204ENST00000456957 IGKV2-24A0A0C4DH68 120 aa10.34□□□□□ -0.75
PKNOX1-204ENST00000456957 A0A0J9YXY3 114 aa10.34□□□□□ -0.75
PKNOX1-204ENST00000456957 PANO1I0J062 215 aa10.34□□□□□ -0.75
PKNOX1-204ENST00000456957 PTTG1IPP53801 180 aa10.34□□□□□ -0.75
PKNOX1-204ENST00000456957 GAGE2BQ13066 116 aa10.34□□□□□ -0.75
PKNOX1-204ENST00000456957 SPATA45Q537H7 98 aa10.34□□□□□ -0.75
PKNOX1-204ENST00000456957 MEIG1Q5JSS6 88 aa10.34□□□□□ -0.75
PKNOX1-204ENST00000456957 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.34□□□□□ -0.75
PKNOX1-204ENST00000456957 SMIM13P0DJ93 91 aa10.33□□□□□ -0.76
PKNOX1-204ENST00000456957 COX17Q14061 63 aa10.33□□□□□ -0.76
PKNOX1-204ENST00000456957 GAGE2EQ4V326 116 aa10.33□□□□□ -0.76
PKNOX1-204ENST00000456957 FAM30AQ9NZY2 134 aa10.33□□□□□ -0.76
PKNOX1-204ENST00000456957 GAGE2DQ9UEU5 116 aa10.33□□□□□ -0.76
PKNOX1-204ENST00000456957 DYNC1H1Q14204 4646 aaKnown RBP10.33□□□□□ -0.76
PKNOX1-204ENST00000456957 A0A0U1RRA0 63 aa10.32□□□□□ -0.76
PKNOX1-204ENST00000456957 Q6ZSA8 131 aa10.32□□□□□ -0.76
PKNOX1-204ENST00000456957 SMIM6P0DI80 62 aa10.31□□□□□ -0.76
PKNOX1-204ENST00000456957 LINC00158P58513 81 aa10.31□□□□□ -0.76
PKNOX1-204ENST00000456957 SPACA4Q8TDM5 124 aa10.31□□□□□ -0.76
PKNOX1-204ENST00000456957 TP73-AS1Q9UF72 201 aa10.31□□□□□ -0.76
PKNOX1-204ENST00000456957 CIRBPQ14011 172 aaKnown RBP10.3□□□□□ -0.76
PKNOX1-204ENST00000456957 LINC00587B1AMM8 73 aa10.29□□□□□ -0.76
PKNOX1-204ENST00000456957 COX8AP10176 69 aa10.29□□□□□ -0.76
PKNOX1-204ENST00000456957 C9orf129Q5T035 196 aaKnown RBP10.29□□□□□ -0.76
PKNOX1-204ENST00000456957 XAGE1AQ9HD64 81 aa10.29□□□□□ -0.76
PKNOX1-204ENST00000456957 DNAH8Q96JB1 4490 aa10.29□□□□□ -0.76
PKNOX1-204ENST00000456957 SCGB1D4Q6XE38 83 aa10.28□□□□□ -0.76
PKNOX1-204ENST00000456957 BOD1L2Q8IYS8 172 aa10.28□□□□□ -0.76
PKNOX1-204ENST00000456957 MIR7-3HGQ8N6C7 128 aa10.28□□□□□ -0.76
PKNOX1-204ENST00000456957 C14orf144Q96I85 54 aa10.28□□□□□ -0.76
PKNOX1-204ENST00000456957 LITAFQ99732 161 aa10.28□□□□□ -0.76
PKNOX1-204ENST00000456957 SND1-IT1Q9HBX3 110 aa10.28□□□□□ -0.76
PKNOX1-204ENST00000456957 LINC00474Q9P2X8 69 aa10.28□□□□□ -0.76
PKNOX1-204ENST00000456957 LRP1BQ9NZR2 4599 aa10.28□□□□□ -0.76
PKNOX1-204ENST00000456957 TIMM17BO60830 172 aa10.27□□□□□ -0.77
PKNOX1-204ENST00000456957 S100A12P80511 92 aa10.27□□□□□ -0.77
PKNOX1-204ENST00000456957 ADAMTSL4-AS1Q5T5F5 129 aa10.27□□□□□ -0.77
PKNOX1-204ENST00000456957 DAND5Q8N907 189 aa10.27□□□□□ -0.77
PKNOX1-204ENST00000456957 KIAA1109Q2LD37 5005 aa10.26□□□□□ -0.77
PKNOX1-204ENST00000456957 HAMPP81172 84 aa10.26□□□□□ -0.77
PKNOX1-204ENST00000456957 FAM168BA1KXE4 195 aa10.25□□□□□ -0.77
PKNOX1-204ENST00000456957 DLEU1O43261 78 aa10.25□□□□□ -0.77
PKNOX1-204ENST00000456957 SCXQ7RTU7 201 aa10.25□□□□□ -0.77
PKNOX1-204ENST00000456957 RYR1P21817 5038 aa10.25□□□□□ -0.77
PKNOX1-204ENST00000456957 A0A087WYN8 130 aa10.24□□□□□ -0.77
PKNOX1-204ENST00000456957 DPH3Q96FX2 82 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms