RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 ATP5L2Q7Z4Y8 100 aa10.89□□□□□ -0.67
MSH6-206ENST00000455383 ALKBH7Q9BT30 221 aaPredicted RBP10.89□□□□□ -0.67
MSH6-206ENST00000455383 VCX2Q9H322 139 aa10.89□□□□□ -0.67
MSH6-206ENST00000455383 CYSLTR1Q9Y271 337 aa10.89□□□□□ -0.67
MSH6-206ENST00000455383 LAMTOR2Q9Y2Q5 125 aa10.89□□□□□ -0.67
MSH6-206ENST00000455383 IGIPA6NJ69 53 aa10.88□□□□□ -0.67
MSH6-206ENST00000455383 F8VRH5 84 aa10.88□□□□□ -0.67
MSH6-206ENST00000455383 SRSF3P84103 164 aaKnown RBP10.88□□□□□ -0.67
MSH6-206ENST00000455383 KRTAP13-2Q52LG2 175 aa10.88□□□□□ -0.67
MSH6-206ENST00000455383 KRTAP13-1Q8IUC0 172 aa10.87□□□□□ -0.67
MSH6-206ENST00000455383 Q8N8P6 123 aa10.87□□□□□ -0.67
MSH6-206ENST00000455383 LINC00167Q96N53 147 aa10.87□□□□□ -0.67
MSH6-206ENST00000455383 ANAPC11Q9NYG5 84 aa10.87□□□□□ -0.67
MSH6-206ENST00000455383 LOC389332A0A1B0GUA5 103 aa10.86□□□□□ -0.67
MSH6-206ENST00000455383 MAP1LC3AQ9H492 121 aa10.86□□□□□ -0.67
MSH6-206ENST00000455383 TPRXLQ17RH7 258 aa10.85□□□□□ -0.67
MSH6-206ENST00000455383 CDKN2A-AS1Q9UH64 79 aa10.85□□□□□ -0.67
MSH6-206ENST00000455383 RPL37AP8A6NKH3 93 aa10.84□□□□□ -0.67
MSH6-206ENST00000455383 HERVK_113P63121 156 aa10.84□□□□□ -0.67
MSH6-206ENST00000455383 PEA15Q15121 130 aa10.84□□□□□ -0.67
MSH6-206ENST00000455383 FAM229BQ4G0N7 80 aa10.84□□□□□ -0.67
MSH6-206ENST00000455383 RETNLBQ9BQ08 111 aa10.84□□□□□ -0.67
MSH6-206ENST00000455383 CXCL5P42830 114 aa10.83□□□□□ -0.68
MSH6-206ENST00000455383 SEC11AP67812 179 aa10.83□□□□□ -0.68
MSH6-206ENST00000455383 ORMDL2Q53FV1 153 aa10.83□□□□□ -0.68
MSH6-206ENST00000455383 IGLV5-37A0A075B6J1 123 aa10.82□□□□□ -0.68
MSH6-206ENST00000455383 K7EMI3 77 aa10.82□□□□□ -0.68
MSH6-206ENST00000455383 LINC00304Q8N9R0 145 aa10.82□□□□□ -0.68
MSH6-206ENST00000455383 CTAG1AP78358 180 aa10.81□□□□□ -0.68
MSH6-206ENST00000455383 CDIP1Q9H305 208 aa10.8□□□□□ -0.68
MSH6-206ENST00000455383 GEMIN7Q9H840 131 aaKnown RBP10.79□□□□□ -0.68
MSH6-206ENST00000455383 IGLV7-46A0A075B6I9 117 aa10.78□□□□□ -0.68
MSH6-206ENST00000455383 GAGE10A6NGK3 116 aa10.78□□□□□ -0.68
MSH6-206ENST00000455383 SMIM1B2RUZ4 78 aa10.78□□□□□ -0.68
MSH6-206ENST00000455383 PAPPA-AS1Q5QFB9 102 aa10.78□□□□□ -0.68
MSH6-206ENST00000455383 TIMM17AQ99595 171 aa10.78□□□□□ -0.68
MSH6-206ENST00000455383 hCG_2014768A0A024R1R8 64 aa10.77□□□□□ -0.69
MSH6-206ENST00000455383 UBE2AP49459 152 aa10.77□□□□□ -0.69
MSH6-206ENST00000455383 PNRC1Q12796 327 aaPredicted RBP10.77□□□□□ -0.69
MSH6-206ENST00000455383 PDZD11Q5EBL8 140 aa10.76□□□□□ -0.69
MSH6-206ENST00000455383 NXT2Q9NPJ8 142 aaKnown RBP10.76□□□□□ -0.69
MSH6-206ENST00000455383 IGLV5-45A0A087WSX0 123 aa10.75□□□□□ -0.69
MSH6-206ENST00000455383 COX7B2Q8TF08 81 aa10.75□□□□□ -0.69
MSH6-206ENST00000455383 TOMM6Q96B49 74 aa10.75□□□□□ -0.69
MSH6-206ENST00000455383 IGKV2D-26A0A0A0MRZ7 120 aa10.73□□□□□ -0.69
MSH6-206ENST00000455383 G0S2P27469 103 aa10.73□□□□□ -0.69
MSH6-206ENST00000455383 NKAPP1Q8N9T2 125 aa10.73□□□□□ -0.69
MSH6-206ENST00000455383 TINCRA0A1B0GVN0 87 aa10.72□□□□□ -0.69
MSH6-206ENST00000455383 ERASQ7Z444 233 aa10.72□□□□□ -0.69
MSH6-206ENST00000455383 IGKV2-28A0A075B6P5 120 aa10.7□□□□□ -0.7
MSH6-206ENST00000455383 SCO1O75880 301 aa10.7□□□□□ -0.7
MSH6-206ENST00000455383 IGKV2D-28P01615 120 aa10.7□□□□□ -0.7
MSH6-206ENST00000455383 RAB5BP61020 215 aa10.7□□□□□ -0.7
MSH6-206ENST00000455383 ANAPC16Q96DE5 110 aa10.7□□□□□ -0.7
MSH6-206ENST00000455383 PPDPFQ9H3Y8 114 aa10.7□□□□□ -0.7
MSH6-206ENST00000455383 PRLHP81277 87 aa10.69□□□□□ -0.7
MSH6-206ENST00000455383 ADCYAP1P18509 176 aa10.68□□□□□ -0.7
MSH6-206ENST00000455383 SCGB3A1Q96QR1 104 aa10.67□□□□□ -0.7
MSH6-206ENST00000455383 TMEM126AQ9H061 195 aa10.67□□□□□ -0.7
MSH6-206ENST00000455383 MT-ND4LP03901 98 aa10.66□□□□□ -0.7
MSH6-206ENST00000455383 SPINK8P0C7L1 97 aa10.66□□□□□ -0.7
MSH6-206ENST00000455383 VPREB1P12018 145 aa10.66□□□□□ -0.7
MSH6-206ENST00000455383 FAM19A1Q7Z5A9 133 aa10.66□□□□□ -0.7
MSH6-206ENST00000455383 PLEKHB2Q96CS7 222 aa10.66□□□□□ -0.7
MSH6-206ENST00000455383 CST9LQ9H4G1 147 aa10.66□□□□□ -0.7
MSH6-206ENST00000455383 TMEM238C9JI98 176 aa10.65□□□□□ -0.7
MSH6-206ENST00000455383 C3orf22Q8N5N4 141 aa10.65□□□□□ -0.7
MSH6-206ENST00000455383 M0R378 163 aa10.64□□□□□ -0.71
MSH6-206ENST00000455383 SPAG11AQ6PDA7 123 aa10.64□□□□□ -0.71
MSH6-206ENST00000455383 LINC01546A6NGU7 62 aa10.63□□□□□ -0.71
MSH6-206ENST00000455383 ATP5LO75964 103 aa10.63□□□□□ -0.71
MSH6-206ENST00000455383 FP248Q71RG6 208 aaPredicted RBP10.63□□□□□ -0.71
MSH6-206ENST00000455383 MRPL18Q9H0U6 180 aaKnown RBP10.63□□□□□ -0.71
MSH6-206ENST00000455383 LINC01549A6NIU2 74 aa10.62□□□□□ -0.71
MSH6-206ENST00000455383 KIAA1644Q3SXP7 199 aa10.61□□□□□ -0.71
MSH6-206ENST00000455383 LCE2DQ5TA82 110 aaPredicted RBP10.61□□□□□ -0.71
MSH6-206ENST00000455383 GNB1LQ9BYB4 327 aa10.61□□□□□ -0.71
MSH6-206ENST00000455383 SND1-IT1Q9HBX3 110 aa10.61□□□□□ -0.71
MSH6-206ENST00000455383 IGLV5-39A0A0G2JS06 123 aa10.6□□□□□ -0.71
MSH6-206ENST00000455383 PFN2P35080 140 aa10.6□□□□□ -0.71
MSH6-206ENST00000455383 PMVKQ15126 192 aa10.6□□□□□ -0.71
MSH6-206ENST00000455383 ASB16-AS1Q495Z4 193 aa10.6□□□□□ -0.71
MSH6-206ENST00000455383 CBLN2Q8IUK8 224 aa10.6□□□□□ -0.71
MSH6-206ENST00000455383 Q8NDZ9 215 aa10.6□□□□□ -0.71
MSH6-206ENST00000455383 H3BRM9 83 aa10.59□□□□□ -0.71
MSH6-206ENST00000455383 RPL24P83731 157 aaKnown RBP10.59□□□□□ -0.71
MSH6-206ENST00000455383 KRTAP13-3Q3SY46 172 aa10.59□□□□□ -0.71
MSH6-206ENST00000455383 COX17Q14061 63 aa10.57□□□□□ -0.72
MSH6-206ENST00000455383 SPRR4Q96PI1 79 aa10.57□□□□□ -0.72
MSH6-206ENST00000455383 ERG28Q9UKR5 140 aa10.57□□□□□ -0.72
MSH6-206ENST00000455383 IGLC3P0DOY3 106 aa10.56□□□□□ -0.72
MSH6-206ENST00000455383 KRTAP4-1Q9BYQ7 146 aa10.56□□□□□ -0.72
MSH6-206ENST00000455383 A0A1B0GVG6 124 aa10.55□□□□□ -0.72
MSH6-206ENST00000455383 LINC01547P58512 204 aaPredicted RBP10.55□□□□□ -0.72
MSH6-206ENST00000455383 HIGD2AQ9BW72 106 aa10.55□□□□□ -0.72
MSH6-206ENST00000455383 RAB14P61106 215 aa10.54□□□□□ -0.72
MSH6-206ENST00000455383 LINC00337Q8N6G1 96 aa10.54□□□□□ -0.72
MSH6-206ENST00000455383 ZNF22P17026 224 aaPredicted RBP10.52□□□□□ -0.73
MSH6-206ENST00000455383 C4orf48Q5BLP8 95 aa10.52□□□□□ -0.73
MSH6-206ENST00000455383 TRAV9-1A0A075B6T8 112 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms