RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 POLR2KP53803 58 aaKnown RBP3.58□□□□□ -1.84
HLA-DPA3-207ENST00000454398 KRTDAPP60985 99 aa3.58□□□□□ -1.84
HLA-DPA3-207ENST00000454398 UBE2BP63146 152 aa3.58□□□□□ -1.84
HLA-DPA3-207ENST00000454398 RNF151Q2KHN1 245 aa3.58□□□□□ -1.84
HLA-DPA3-207ENST00000454398 SPATA45Q537H7 98 aa3.58□□□□□ -1.84
HLA-DPA3-207ENST00000454398 COL5A1-AS1Q5SY13 56 aa3.58□□□□□ -1.84
HLA-DPA3-207ENST00000454398 UNQ6190/PRO20217Q6UXQ8 127 aa3.58□□□□□ -1.84
HLA-DPA3-207ENST00000454398 BAGE3Q86Y29 109 aa3.58□□□□□ -1.84
HLA-DPA3-207ENST00000454398 NRACQ8N912 160 aa3.58□□□□□ -1.84
HLA-DPA3-207ENST00000454398 FAM104AQ969W3 186 aa3.58□□□□□ -1.84
HLA-DPA3-207ENST00000454398 IMMP2LQ96T52 175 aa3.58□□□□□ -1.84
HLA-DPA3-207ENST00000454398 RETNLBQ9BQ08 111 aa3.58□□□□□ -1.84
HLA-DPA3-207ENST00000454398 MIEN1Q9BRT3 115 aa3.58□□□□□ -1.84
HLA-DPA3-207ENST00000454398 A0A1B0GUT8 65 aa3.57□□□□□ -1.84
HLA-DPA3-207ENST00000454398 C2orf82Q6UX34 121 aa3.57□□□□□ -1.84
HLA-DPA3-207ENST00000454398 TEX43Q6ZNM6 134 aa3.57□□□□□ -1.84
HLA-DPA3-207ENST00000454398 BORCS7Q96B45 105 aa3.57□□□□□ -1.84
HLA-DPA3-207ENST00000454398 C2orf48Q96LS8 159 aa3.57□□□□□ -1.84
HLA-DPA3-207ENST00000454398 MRPL18Q9H0U6 180 aaKnown RBP3.57□□□□□ -1.84
HLA-DPA3-207ENST00000454398 IGLV1-50A0A075B6I6 118 aa3.56□□□□□ -1.84
HLA-DPA3-207ENST00000454398 A0A087X002 238 aa3.56□□□□□ -1.84
HLA-DPA3-207ENST00000454398 A8MWL6 223 aa3.56□□□□□ -1.84
HLA-DPA3-207ENST00000454398 NDUFA1O15239 70 aa3.56□□□□□ -1.84
HLA-DPA3-207ENST00000454398 NUPR1O60356 82 aa3.56□□□□□ -1.84
HLA-DPA3-207ENST00000454398 SERF1AO75920 110 aa3.56□□□□□ -1.84
HLA-DPA3-207ENST00000454398 SUMO2P61956 95 aaKnown RBP3.56□□□□□ -1.84
HLA-DPA3-207ENST00000454398 C9orf129Q5T035 196 aaKnown RBP3.56□□□□□ -1.84
HLA-DPA3-207ENST00000454398 Q6ZN92 141 aa3.56□□□□□ -1.84
HLA-DPA3-207ENST00000454398 TMEM191AQ9H0A3 160 aa3.56□□□□□ -1.84
HLA-DPA3-207ENST00000454398 MRPL35Q9NZE8 188 aaKnown RBP3.56□□□□□ -1.84
HLA-DPA3-207ENST00000454398 IGHV3OR16-9A0A0B4J2B5 98 aa3.55□□□□□ -1.84
HLA-DPA3-207ENST00000454398 C20orf202A1L168 122 aa3.55□□□□□ -1.84
HLA-DPA3-207ENST00000454398 HINT1P49773 126 aaPredicted RBP3.55□□□□□ -1.84
HLA-DPA3-207ENST00000454398 MRPL51Q4U2R6 128 aaKnown RBP3.55□□□□□ -1.84
HLA-DPA3-207ENST00000454398 CT83Q5H943 113 aa3.55□□□□□ -1.84
HLA-DPA3-207ENST00000454398 ZC2HC1BQ5TFG8 222 aa3.55□□□□□ -1.84
HLA-DPA3-207ENST00000454398 FAM231DQ6ZW35 169 aa3.55□□□□□ -1.84
HLA-DPA3-207ENST00000454398 LINC01551Q86U37 167 aa3.55□□□□□ -1.84
HLA-DPA3-207ENST00000454398 TSKUQ8WUA8 353 aa3.55□□□□□ -1.84
HLA-DPA3-207ENST00000454398 KIR2DL4Q99706 377 aa3.55□□□□□ -1.84
HLA-DPA3-207ENST00000454398 ANAPC11Q9NYG5 84 aa3.55□□□□□ -1.84
HLA-DPA3-207ENST00000454398 UQCR10Q9UDW1 63 aa3.55□□□□□ -1.84
HLA-DPA3-207ENST00000454398 VCYO14598 125 aa3.54□□□□□ -1.84
HLA-DPA3-207ENST00000454398 HBBP68871 147 aa3.54□□□□□ -1.84
HLA-DPA3-207ENST00000454398 ATOH7Q8N100 152 aa3.54□□□□□ -1.84
HLA-DPA3-207ENST00000454398 ALKBH7Q9BT30 221 aaPredicted RBP3.54□□□□□ -1.84
HLA-DPA3-207ENST00000454398 SMIM2Q9BVW6 85 aa3.54□□□□□ -1.84
HLA-DPA3-207ENST00000454398 XAGE1AQ9HD64 81 aa3.54□□□□□ -1.84
HLA-DPA3-207ENST00000454398 V9GYV3 84 aa3.54□□□□□ -1.84
HLA-DPA3-207ENST00000454398 TRAV9-1A0A075B6T8 112 aa3.53□□□□□ -1.84
HLA-DPA3-207ENST00000454398 D6R8Y8 96 aa3.53□□□□□ -1.84
HLA-DPA3-207ENST00000454398 NPYP01303 97 aa3.53□□□□□ -1.84
HLA-DPA3-207ENST00000454398 LINC00310P59036 64 aa3.53□□□□□ -1.84
HLA-DPA3-207ENST00000454398 KIAA0087Q14695 138 aa3.53□□□□□ -1.84
HLA-DPA3-207ENST00000454398 KIAA1644Q3SXP7 199 aa3.53□□□□□ -1.84
HLA-DPA3-207ENST00000454398 LINC00242Q5T6M2 205 aa3.53□□□□□ -1.84
HLA-DPA3-207ENST00000454398 MRPL54Q6P161 138 aaKnown RBP3.53□□□□□ -1.84
HLA-DPA3-207ENST00000454398 Q6ZVH6 145 aa3.53□□□□□ -1.84
HLA-DPA3-207ENST00000454398 ERASQ7Z444 233 aa3.53□□□□□ -1.84
HLA-DPA3-207ENST00000454398 VPS25Q9BRG1 176 aa3.53□□□□□ -1.84
HLA-DPA3-207ENST00000454398 NAT8BQ9UHF3 227 aa3.53□□□□□ -1.84
HLA-DPA3-207ENST00000454398 LAMTOR2Q9Y2Q5 125 aa3.53□□□□□ -1.84
HLA-DPA3-207ENST00000454398 CSDC2Q9Y534 153 aaKnown RBP3.53□□□□□ -1.84
HLA-DPA3-207ENST00000454398 IGLV4-3A0A075B6K6 122 aa3.52□□□□□ -1.85
HLA-DPA3-207ENST00000454398 GAGE10A6NGK3 116 aa3.52□□□□□ -1.85
HLA-DPA3-207ENST00000454398 NDUFC2-KCTD14E9PQ53 114 aa3.52□□□□□ -1.85
HLA-DPA3-207ENST00000454398 TNFRSF6BO95407 300 aa3.52□□□□□ -1.85
HLA-DPA3-207ENST00000454398 TLX1NBP0CAT3 122 aa3.52□□□□□ -1.85
HLA-DPA3-207ENST00000454398 C3orf79P0CE67 100 aa3.52□□□□□ -1.85
HLA-DPA3-207ENST00000454398 RPL13AP40429 203 aaKnown RBP3.52□□□□□ -1.85
HLA-DPA3-207ENST00000454398 RIGQ13278 110 aa3.52□□□□□ -1.85
HLA-DPA3-207ENST00000454398 VAMP3Q15836 100 aa3.52□□□□□ -1.85
HLA-DPA3-207ENST00000454398 FAM104BQ5XKR9 115 aa3.52□□□□□ -1.85
HLA-DPA3-207ENST00000454398 TIMM21Q9BVV7 248 aa3.52□□□□□ -1.85
HLA-DPA3-207ENST00000454398 SPANXA1Q9NS26 97 aa3.52□□□□□ -1.85
HLA-DPA3-207ENST00000454398 TOMM7Q9P0U1 55 aa3.52□□□□□ -1.85
HLA-DPA3-207ENST00000454398 CHTOPQ9Y3Y2 248 aaKnown RBP3.52□□□□□ -1.85
HLA-DPA3-207ENST00000454398 FSIP2Q5CZC0 6907 aa3.51□□□□□ -1.85
HLA-DPA3-207ENST00000454398 ZNF861PO60384 105 aa3.51□□□□□ -1.85
HLA-DPA3-207ENST00000454398 IGLC3P0DOY3 106 aa3.51□□□□□ -1.85
HLA-DPA3-207ENST00000454398 CKS2P33552 79 aa3.51□□□□□ -1.85
HLA-DPA3-207ENST00000454398 UBE2V1Q13404 147 aa3.51□□□□□ -1.85
HLA-DPA3-207ENST00000454398 COX19Q49B96 90 aa3.51□□□□□ -1.85
HLA-DPA3-207ENST00000454398 KRTAP13-2Q52LG2 175 aa3.51□□□□□ -1.85
HLA-DPA3-207ENST00000454398 TMEM136Q6ZRR5 245 aa3.51□□□□□ -1.85
HLA-DPA3-207ENST00000454398 FAM19A2Q8N3H0 131 aa3.51□□□□□ -1.85
HLA-DPA3-207ENST00000454398 OSTCQ9NRP0 149 aa3.51□□□□□ -1.85
HLA-DPA3-207ENST00000454398 TRBV30A0A0K0K1B3 111 aa3.5□□□□□ -1.85
HLA-DPA3-207ENST00000454398 RPL37AP8A6NKH3 93 aa3.5□□□□□ -1.85
HLA-DPA3-207ENST00000454398 HSBP1O75506 76 aa3.5□□□□□ -1.85
HLA-DPA3-207ENST00000454398 MRPS36P82909 103 aaKnown RBP3.5□□□□□ -1.85
HLA-DPA3-207ENST00000454398 SMAGPQ0VAQ4 97 aa3.5□□□□□ -1.85
HLA-DPA3-207ENST00000454398 PMCHL1Q16048 86 aa3.5□□□□□ -1.85
HLA-DPA3-207ENST00000454398 LINC00173Q6ZV60 143 aa3.5□□□□□ -1.85
HLA-DPA3-207ENST00000454398 TYMSOSQ8TAI1 123 aa3.5□□□□□ -1.85
HLA-DPA3-207ENST00000454398 GNB1LQ9BYB4 327 aa3.5□□□□□ -1.85
HLA-DPA3-207ENST00000454398 CRCT1Q9UGL9 99 aa3.5□□□□□ -1.85
HLA-DPA3-207ENST00000454398 C22orf24Q9Y442 160 aa3.5□□□□□ -1.85
HLA-DPA3-207ENST00000454398 LOC389332A0A1B0GUA5 103 aa3.49□□□□□ -1.85
HLA-DPA3-207ENST00000454398 IFI27P40305 119 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms