RNA–Protein interactions for RNA: ENST00000452859.6

SNX11-203, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-203ENST00000452859 WFDC2Q14508 124 aa12.85□□□□□ -0.35
SNX11-203ENST00000452859 TMEM170BQ5T4T1 132 aa12.85□□□□□ -0.35
SNX11-203ENST00000452859 IGLV10-54A0A075B6I4 117 aa12.84□□□□□ -0.35
SNX11-203ENST00000452859 A0A1B0GWB2 263 aa12.84□□□□□ -0.35
SNX11-203ENST00000452859 SRSF9Q13242 221 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNX11-203ENST00000452859 NAA38Q9BRA0 125 aaKnown RBP12.84□□□□□ -0.35
SNX11-203ENST00000452859 VCX2Q9H322 139 aa12.84□□□□□ -0.35
SNX11-203ENST00000452859 PYGO1Q9Y3Y4 419 aa12.84□□□□□ -0.35
SNX11-203ENST00000452859 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.82□□□□□ -0.36
SNX11-203ENST00000452859 K7ERJ3 54 aa12.82□□□□□ -0.36
SNX11-203ENST00000452859 LGALS3P17931 250 aaKnown RBP12.82□□□□□ -0.36
SNX11-203ENST00000452859 DGAT2L7PQ6IED9 249 aa12.82□□□□□ -0.36
SNX11-203ENST00000452859 IGKV3OR2-268A0A0C4DH90 116 aa12.81□□□□□ -0.36
SNX11-203ENST00000452859 SPANXB1Q9NS25 103 aaPredicted RBP12.81□□□□□ -0.36
SNX11-203ENST00000452859 DYNC1H1Q14204 4646 aaKnown RBP12.81□□□□□ -0.36
SNX11-203ENST00000452859 LEPROTO15243 131 aa12.8□□□□□ -0.36
SNX11-203ENST00000452859 PLEKHB2Q96CS7 222 aa12.8□□□□□ -0.36
SNX11-203ENST00000452859 USP17L23D6RBM5 183 aa12.79□□□□□ -0.36
SNX11-203ENST00000452859 KRTAP10-1P60331 282 aa12.79□□□□□ -0.36
SNX11-203ENST00000452859 KRTAP26-1Q6PEX3 210 aa12.79□□□□□ -0.36
SNX11-203ENST00000452859 IGLV4-3A0A075B6K6 122 aa12.78□□□□□ -0.36
SNX11-203ENST00000452859 J3QQQ9 107 aa12.78□□□□□ -0.36
SNX11-203ENST00000452859 RNF151Q2KHN1 245 aa12.78□□□□□ -0.36
SNX11-203ENST00000452859 LYRM7Q5U5X0 104 aa12.78□□□□□ -0.36
SNX11-203ENST00000452859 SPANXA1Q9NS26 97 aa12.78□□□□□ -0.36
SNX11-203ENST00000452859 TMEM223A0PJW6 202 aa12.77□□□□□ -0.36
SNX11-203ENST00000452859 CSDC2Q9Y534 153 aaKnown RBP12.77□□□□□ -0.36
SNX11-203ENST00000452859 VPS25Q9BRG1 176 aa12.77□□□□□ -0.37
SNX11-203ENST00000452859 CDC42SE2Q9NRR3 84 aa12.77□□□□□ -0.37
SNX11-203ENST00000452859 F8W1H4 67 aa12.76□□□□□ -0.37
SNX11-203ENST00000452859 KIAA1109Q2LD37 5005 aa12.76□□□□□ -0.37
SNX11-203ENST00000452859 GAGE12HA6NDE8 117 aa12.75□□□□□ -0.37
SNX11-203ENST00000452859 CHCHD10Q8WYQ3 142 aaPredicted RBP12.75□□□□□ -0.37
SNX11-203ENST00000452859 AMELXQ99217 191 aa12.75□□□□□ -0.37
SNX11-203ENST00000452859 TIMM21Q9BVV7 248 aa12.75□□□□□ -0.37
SNX11-203ENST00000452859 UBE2D4Q9Y2X8 147 aa12.75□□□□□ -0.37
SNX11-203ENST00000452859 SS18Q15532 418 aa12.74□□□□□ -0.37
SNX11-203ENST00000452859 CFAP161Q6P656 301 aa12.74□□□□□ -0.37
SNX11-203ENST00000452859 ZNF22P17026 224 aaPredicted RBP12.73□□□□□ -0.37
SNX11-203ENST00000452859 UBE2D1P51668 147 aa12.73□□□□□ -0.37
SNX11-203ENST00000452859 LINC00959A0A1B0GUT2 108 aa12.73□□□□□ -0.37
SNX11-203ENST00000452859 OPRPNQ99935 248 aaPredicted RBP12.73□□□□□ -0.37
SNX11-203ENST00000452859 LRP1BQ9NZR2 4599 aa12.72□□□□□ -0.37
SNX11-203ENST00000452859 MRPS36P82909 103 aaKnown RBP12.72□□□□□ -0.37
SNX11-203ENST00000452859 A0A0J9YXV3 536 aa12.71□□□□□ -0.37
SNX11-203ENST00000452859 TMEM238C9JI98 176 aa12.71□□□□□ -0.37
SNX11-203ENST00000452859 XCL1P47992 114 aa12.7□□□□□ -0.38
SNX11-203ENST00000452859 TSPEAR-AS2P59090 65 aa12.7□□□□□ -0.38
SNX11-203ENST00000452859 TINCRA0A1B0GVN0 87 aa12.7□□□□□ -0.38
SNX11-203ENST00000452859 DNAH5Q8TE73 4624 aa12.69□□□□□ -0.38
SNX11-203ENST00000452859 J3QR89 54 aa12.69□□□□□ -0.38
SNX11-203ENST00000452859 RPL24P83731 157 aaKnown RBP12.69□□□□□ -0.38
SNX11-203ENST00000452859 XGP55808 180 aa12.68□□□□□ -0.38
SNX11-203ENST00000452859 HERC2O95714 4834 aa12.67□□□□□ -0.38
SNX11-203ENST00000452859 FOXI1Q12951 378 aa12.67□□□□□ -0.38
SNX11-203ENST00000452859 CD164L2Q6UWJ8 174 aa12.67□□□□□ -0.38
SNX11-203ENST00000452859 Q6ZUT4 128 aa12.67□□□□□ -0.38
SNX11-203ENST00000452859 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.66□□□□□ -0.38
SNX11-203ENST00000452859 APOMO95445 188 aa12.66□□□□□ -0.38
SNX11-203ENST00000452859 LINC01620Q4KN68 170 aa12.66□□□□□ -0.38
SNX11-203ENST00000452859 RNASE13Q5GAN3 156 aaKnown RBP12.66□□□□□ -0.38
SNX11-203ENST00000452859 TRAV13-1A0A0B4J241 112 aa12.66□□□□□ -0.38
SNX11-203ENST00000452859 IGHV1-58A0A0C4DH39 117 aa12.66□□□□□ -0.38
SNX11-203ENST00000452859 PCP4P48539 62 aa12.66□□□□□ -0.38
SNX11-203ENST00000452859 GEMIN7Q9H840 131 aaKnown RBP12.66□□□□□ -0.38
SNX11-203ENST00000452859 TSPAN13O95857 204 aa12.65□□□□□ -0.38
SNX11-203ENST00000452859 Q8N1X5 172 aa12.65□□□□□ -0.38
SNX11-203ENST00000452859 TRBV20-1A0A075B6N2 111 aa12.64□□□□□ -0.39
SNX11-203ENST00000452859 H3BMG7 143 aa12.64□□□□□ -0.39
SNX11-203ENST00000452859 CNBPP62633 177 aaKnown RBP12.64□□□□□ -0.39
SNX11-203ENST00000452859 C15orf56Q8N910 161 aa12.64□□□□□ -0.39
SNX11-203ENST00000452859 C9orf163Q8N9P6 203 aa12.64□□□□□ -0.39
SNX11-203ENST00000452859 PRO1854Q9UHT4 67 aa12.64□□□□□ -0.39
SNX11-203ENST00000452859 FAM30AQ9NZY2 134 aa12.63□□□□□ -0.39
SNX11-203ENST00000452859 RYR1P21817 5038 aa12.63□□□□□ -0.39
SNX11-203ENST00000452859 IGHV3-64A0A075B6Q5 118 aa12.62□□□□□ -0.39
SNX11-203ENST00000452859 A0A0B4J2C4 111 aa12.62□□□□□ -0.39
SNX11-203ENST00000452859 LOC107984156A0A0G2JMH3 177 aa12.62□□□□□ -0.39
SNX11-203ENST00000452859 CFC1BP0CG36 223 aa12.62□□□□□ -0.39
SNX11-203ENST00000452859 CFC1P0CG37 223 aa12.62□□□□□ -0.39
SNX11-203ENST00000452859 Q6ZSA8 131 aa12.62□□□□□ -0.39
SNX11-203ENST00000452859 ARL17AQ8IVW1 177 aa12.62□□□□□ -0.39
SNX11-203ENST00000452859 MALP21145 153 aa12.62□□□□□ -0.39
SNX11-203ENST00000452859 FAM104AQ969W3 186 aa12.62□□□□□ -0.39
SNX11-203ENST00000452859 GVQW2A0A096LPI5 108 aaPredicted RBP12.61□□□□□ -0.39
SNX11-203ENST00000452859 A0A0J9YXY3 114 aa12.61□□□□□ -0.39
SNX11-203ENST00000452859 COX7A2LO14548 114 aa12.61□□□□□ -0.39
SNX11-203ENST00000452859 HIGD2BQ4VC39 106 aa12.61□□□□□ -0.39
SNX11-203ENST00000452859 PSMB2P49721 201 aa12.59□□□□□ -0.39
SNX11-203ENST00000452859 HERVK_113P63121 156 aa12.59□□□□□ -0.39
SNX11-203ENST00000452859 SPANXDQ9BXN6 97 aa12.59□□□□□ -0.39
SNX11-203ENST00000452859 SPANXCQ9NY87 97 aa12.59□□□□□ -0.39
SNX11-203ENST00000452859 NDUFA12Q9UI09 145 aa12.59□□□□□ -0.39
SNX11-203ENST00000452859 A4D1N5 150 aa12.59□□□□□ -0.39
SNX11-203ENST00000452859 MUSTN1Q8IVN3 82 aa12.59□□□□□ -0.39
SNX11-203ENST00000452859 APOBP04114 4563 aaKnown RBP12.58□□□□□ -0.4
SNX11-203ENST00000452859 ZNF561-AS1K7EIQ3 104 aa12.58□□□□□ -0.4
SNX11-203ENST00000452859 TIMM17BO60830 172 aa12.58□□□□□ -0.4
SNX11-203ENST00000452859 HAMPP81172 84 aa12.58□□□□□ -0.4
SNX11-203ENST00000452859 ERG28Q9UKR5 140 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms