RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 MIR17HGQ75NE6 70 aa0.15□□□□□ -2.39
LRCH3-209ENST00000452660 PRNTQ86SH4 94 aa0.15□□□□□ -2.39
LRCH3-209ENST00000452660 CLVS1Q8IUQ0 354 aaPredicted RBP0.15□□□□□ -2.39
LRCH3-209ENST00000452660 PRR15Q8IV56 129 aa0.15□□□□□ -2.39
LRCH3-209ENST00000452660 ACBD7Q8N6N7 88 aa0.15□□□□□ -2.39
LRCH3-209ENST00000452660 SMIM19Q96E16 107 aa0.15□□□□□ -2.39
LRCH3-209ENST00000452660 RPL39LQ96EH5 51 aaKnown RBP0.15□□□□□ -2.39
LRCH3-209ENST00000452660 CIB3Q96Q77 187 aaPredicted RBP0.15□□□□□ -2.39
LRCH3-209ENST00000452660 Q9BRP9 147 aa0.15□□□□□ -2.39
LRCH3-209ENST00000452660 NMES1Q9C002 83 aa0.15□□□□□ -2.39
LRCH3-209ENST00000452660 RNASE7Q9H1E1 156 aaKnown RBP0.15□□□□□ -2.39
LRCH3-209ENST00000452660 ATG5Q9H1Y0 275 aa0.15□□□□□ -2.39
LRCH3-209ENST00000452660 C11orf1Q9H5F2 150 aa0.15□□□□□ -2.39
LRCH3-209ENST00000452660 IFT46Q9NQC8 304 aa0.15□□□□□ -2.39
LRCH3-209ENST00000452660 CDC42SE2Q9NRR3 84 aa0.15□□□□□ -2.39
LRCH3-209ENST00000452660 TXNL4BQ9NX01 149 aaKnown RBP0.15□□□□□ -2.39
LRCH3-209ENST00000452660 LOC100506127A0A0U1RQW1 187 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 C3orf85A0A1B0GTC6 90 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 A0A1B0GU33 70 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 ETDCA0A1B0GVM5 59 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 IGSF23A1L1A6 192 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 RAB19A4D1S5 217 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 C1orf196B1AJZ1 125 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 D6R8Y8 96 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 TEX46H3BTG2 121 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 GNGT2O14610 69 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 NBEAP1P0C6P0 100 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 TPT1P13693 172 aaKnown RBP0.14□□□□□ -2.39
LRCH3-209ENST00000452660 CRIP1P50238 77 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 TMBIM6P55061 237 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 NCS1P62166 190 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 ZNF345Q14585 488 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 IAH1Q2TAA2 248 aaPredicted RBP0.14□□□□□ -2.39
LRCH3-209ENST00000452660 LINC01554Q52M75 96 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 SPANXN5Q5MJ07 72 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 ZFP82Q8N141 532 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 OR5C1Q8NGR4 320 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 FAM167A-AS1Q96KT0 104 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 MGST2Q99735 147 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 PRRT1Q99946 306 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 SLC25A21Q9BQT8 299 aaPredicted RBP0.14□□□□□ -2.39
LRCH3-209ENST00000452660 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.14□□□□□ -2.39
LRCH3-209ENST00000452660 GID8Q9NWU2 228 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 RABL2AQ9UBK7 228 aaPredicted RBP0.14□□□□□ -2.39
LRCH3-209ENST00000452660 EXTL2Q9UBQ6 330 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 RABL2BQ9UNT1 228 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 PRELID1Q9Y255 219 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 U3KQ87 197 aa0.14□□□□□ -2.39
LRCH3-209ENST00000452660 IGHV6-1A0A0B4J1U7 121 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 A0A0D9SG42 100 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 A6NDN8 102 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 F8WEM9 126 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 NCR3O14931 201 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 SH2D1AO60880 128 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 FAM107AO95990 144 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 CXorf1O96002 111 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 CXCL1P09341 107 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 METTL15P1P0C7V9 234 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 AKR1C4P17516 323 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 SPRR1BP22528 89 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 S100A7P31151 101 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 RANBP1P43487 201 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 SULT1A1P50225 295 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 CKS1BP61024 79 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 GNG11P61952 73 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 C22orf42Q6IC83 251 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 RASL11AQ6T310 242 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 C12orf45Q8N5I9 185 aaPredicted RBP0.13□□□□□ -2.39
LRCH3-209ENST00000452660 GATD1Q8NB37 220 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 MNS1Q8NEH6 495 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 DEFB105AQ8NG35 78 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 MED28Q9H204 178 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 DIABLOQ9NR28 239 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 TMEM14CQ9P0S9 112 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 LENEPQ9Y5L5 61 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 ARL2-SNX15V9GYD0 113 aa0.13□□□□□ -2.39
LRCH3-209ENST00000452660 TRBV10-3A0A0K0K1G6 114 aa0.12□□□□□ -2.39
LRCH3-209ENST00000452660 BBIP1A8MTZ0 92 aa0.12□□□□□ -2.39
LRCH3-209ENST00000452660 CASQ2O14958 399 aaPredicted RBP0.12□□□□□ -2.39
LRCH3-209ENST00000452660 PSPHP1O15172 72 aa0.12□□□□□ -2.39
LRCH3-209ENST00000452660 HMGB3O15347 200 aaKnown RBP0.12□□□□□ -2.39
LRCH3-209ENST00000452660 TCL1BO95988 128 aa0.12□□□□□ -2.39
LRCH3-209ENST00000452660 SMIM17P0DL12 118 aa0.12□□□□□ -2.39
LRCH3-209ENST00000452660 SULT1A3P0DMM9 295 aa0.12□□□□□ -2.39
LRCH3-209ENST00000452660 SULT1A4P0DMN0 295 aa0.12□□□□□ -2.39
LRCH3-209ENST00000452660 ZNF25P17030 456 aaPredicted RBP0.12□□□□□ -2.39
LRCH3-209ENST00000452660 PMCHP20382 165 aa0.12□□□□□ -2.39
LRCH3-209ENST00000452660 MYL9P24844 172 aa0.12□□□□□ -2.39
LRCH3-209ENST00000452660 CASQ1P31415 396 aa0.12□□□□□ -2.39
LRCH3-209ENST00000452660 SPRR1AP35321 89 aa0.12□□□□□ -2.39
LRCH3-209ENST00000452660 RPL39P62891 51 aaKnown RBP0.12□□□□□ -2.39
LRCH3-209ENST00000452660 UBE2L3P68036 154 aaKnown RBP0.12□□□□□ -2.39
LRCH3-209ENST00000452660 CD164Q04900 197 aa0.12□□□□□ -2.39
LRCH3-209ENST00000452660 BAXQ07812 192 aa0.12□□□□□ -2.39
LRCH3-209ENST00000452660 PDE6HQ13956 83 aa0.12□□□□□ -2.39
LRCH3-209ENST00000452660 SMCO1Q147U7 214 aa0.12□□□□□ -2.39
LRCH3-209ENST00000452660 CCDC58Q4VC31 144 aa0.12□□□□□ -2.39
LRCH3-209ENST00000452660 SPANXN1Q5VSR9 72 aa0.12□□□□□ -2.39
LRCH3-209ENST00000452660 CSAG1Q6PB30 78 aa0.12□□□□□ -2.39
LRCH3-209ENST00000452660 TMEM91Q6ZNR0 172 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms