RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 SYCP2Q9BX26 1530 aa2.25□□□□□ -2.05
HMGB3P21-201ENST00000452483 DNAJC13O75165 2243 aa2.25□□□□□ -2.05
HMGB3P21-201ENST00000452483 KMT2BQ9UMN6 2715 aaPredicted RBP2.25□□□□□ -2.05
HMGB3P21-201ENST00000452483 PAPPAQ13219 1627 aa2.24□□□□□ -2.05
HMGB3P21-201ENST00000452483 UBR3Q6ZT12 1888 aa2.24□□□□□ -2.05
HMGB3P21-201ENST00000452483 USP32Q8NFA0 1604 aa2.24□□□□□ -2.05
HMGB3P21-201ENST00000452483 IFI6P09912 130 aa2.24□□□□□ -2.05
HMGB3P21-201ENST00000452483 C5P01031 1676 aa2.24□□□□□ -2.05
HMGB3P21-201ENST00000452483 ALS2Q96Q42 1657 aa2.24□□□□□ -2.05
HMGB3P21-201ENST00000452483 PHRF1Q9P1Y6 1649 aaKnown RBP2.24□□□□□ -2.05
HMGB3P21-201ENST00000452483 ALKQ9UM73 1620 aa2.24□□□□□ -2.05
HMGB3P21-201ENST00000452483 DIP2AQ14689 1571 aa2.23□□□□□ -2.05
HMGB3P21-201ENST00000452483 ZMYM4Q5VZL5 1548 aa2.23□□□□□ -2.05
HMGB3P21-201ENST00000452483 IFT172Q9UG01 1749 aa2.23□□□□□ -2.05
HMGB3P21-201ENST00000452483 WIZO95785 1651 aa2.23□□□□□ -2.05
HMGB3P21-201ENST00000452483 NHSQ6T4R5 1651 aa2.23□□□□□ -2.05
HMGB3P21-201ENST00000452483 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
HMGB3P21-201ENST00000452483 SPINK7P58062 85 aa2.23□□□□□ -2.05
HMGB3P21-201ENST00000452483 SPATA8Q6RVD6 105 aa2.23□□□□□ -2.05
HMGB3P21-201ENST00000452483 TMEM263Q8WUH6 116 aaKnown RBP2.23□□□□□ -2.05
HMGB3P21-201ENST00000452483 SDK1Q7Z5N4 2213 aa2.23□□□□□ -2.05
HMGB3P21-201ENST00000452483 LRP6O75581 1613 aa2.23□□□□□ -2.05
HMGB3P21-201ENST00000452483 TIAM2Q8IVF5 1701 aa2.22□□□□□ -2.05
HMGB3P21-201ENST00000452483 CLASP1Q7Z460 1538 aa2.22□□□□□ -2.05
HMGB3P21-201ENST00000452483 KRTAP12-2P59991 146 aa2.22□□□□□ -2.05
HMGB3P21-201ENST00000452483 WFDC9Q8NEX5 89 aa2.22□□□□□ -2.05
HMGB3P21-201ENST00000452483 TRAV21A0A0B4J279 112 aa2.21□□□□□ -2.06
HMGB3P21-201ENST00000452483 LINC01549A6NIU2 74 aa2.21□□□□□ -2.06
HMGB3P21-201ENST00000452483 PP632Q6XCG6 107 aa2.21□□□□□ -2.06
HMGB3P21-201ENST00000452483 OBSCN-AS1Q96MR7 158 aa2.21□□□□□ -2.06
HMGB3P21-201ENST00000452483 LINC00472Q9H8W2 130 aa2.21□□□□□ -2.06
HMGB3P21-201ENST00000452483 NESP48681 1621 aa2.2□□□□□ -2.06
HMGB3P21-201ENST00000452483 CICQ96RK0 1608 aaPredicted RBP2.2□□□□□ -2.06
HMGB3P21-201ENST00000452483 ANKRD50Q9ULJ7 1429 aa2.2□□□□□ -2.06
HMGB3P21-201ENST00000452483 TSC2P49815 1807 aa2.2□□□□□ -2.06
HMGB3P21-201ENST00000452483 HMGA1P17096 107 aaKnown RBP2.2□□□□□ -2.06
HMGB3P21-201ENST00000452483 KRTAP10-8P60410 259 aa2.2□□□□□ -2.06
HMGB3P21-201ENST00000452483 NREPQ16612 68 aa2.2□□□□□ -2.06
HMGB3P21-201ENST00000452483 MROH2AA6NES4 1674 aa2.2□□□□□ -2.06
HMGB3P21-201ENST00000452483 VWDEQ8N2E2 1590 aa2.19□□□□□ -2.06
HMGB3P21-201ENST00000452483 MAST1Q9Y2H9 1570 aa2.19□□□□□ -2.06
HMGB3P21-201ENST00000452483 J3QRE1 110 aa2.19□□□□□ -2.06
HMGB3P21-201ENST00000452483 DEFB112Q30KQ8 113 aa2.19□□□□□ -2.06
HMGB3P21-201ENST00000452483 COL14A1Q05707 1796 aaKnown RBP2.18□□□□□ -2.06
HMGB3P21-201ENST00000452483 CPS1P31327 1500 aa2.18□□□□□ -2.06
HMGB3P21-201ENST00000452483 NHSL1Q5SYE7 1610 aa2.18□□□□□ -2.06
HMGB3P21-201ENST00000452483 PARP4Q9UKK3 1724 aaKnown RBP2.18□□□□□ -2.06
HMGB3P21-201ENST00000452483 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.18□□□□□ -2.06
HMGB3P21-201ENST00000452483 GAFA1Q96PS6 74 aa2.18□□□□□ -2.06
HMGB3P21-201ENST00000452483 PKD1L2Q7Z442 2459 aa2.18□□□□□ -2.06
HMGB3P21-201ENST00000452483 TRBV30A0A0K0K1B3 111 aa2.17□□□□□ -2.06
HMGB3P21-201ENST00000452483 TRBV6-1A0A0K0K1D8 114 aa2.17□□□□□ -2.06
HMGB3P21-201ENST00000452483 ZCCHC13Q8WW36 166 aaKnown RBP2.17□□□□□ -2.06
HMGB3P21-201ENST00000452483 SAMD9Q5K651 1589 aa2.17□□□□□ -2.06
HMGB3P21-201ENST00000452483 UGGT1Q9NYU2 1555 aa2.17□□□□□ -2.06
HMGB3P21-201ENST00000452483 ZNF831Q5JPB2 1677 aa2.17□□□□□ -2.06
HMGB3P21-201ENST00000452483 BCORQ6W2J9 1755 aa2.17□□□□□ -2.06
HMGB3P21-201ENST00000452483 NCOA6Q14686 2063 aaPredicted RBP2.16□□□□□ -2.06
HMGB3P21-201ENST00000452483 MED13LQ71F56 2210 aa2.16□□□□□ -2.06
HMGB3P21-201ENST00000452483 A0A1B0GU69 56 aa2.16□□□□□ -2.06
HMGB3P21-201ENST00000452483 C10orf99Q6UWK7 81 aa2.16□□□□□ -2.06
HMGB3P21-201ENST00000452483 SMIM11BQ8TCY0 68 aa2.16□□□□□ -2.06
HMGB3P21-201ENST00000452483 RICTORQ6R327 1708 aa2.16□□□□□ -2.06
HMGB3P21-201ENST00000452483 LRRC7Q96NW7 1537 aa2.16□□□□□ -2.06
HMGB3P21-201ENST00000452483 INTS1Q8N201 2190 aaKnown RBP2.15□□□□□ -2.07
HMGB3P21-201ENST00000452483 CACNA1AO00555 2505 aa2.15□□□□□ -2.07
HMGB3P21-201ENST00000452483 LRRC37A2A6NM11 1700 aa2.15□□□□□ -2.07
HMGB3P21-201ENST00000452483 FCER1GP30273 86 aa2.15□□□□□ -2.07
HMGB3P21-201ENST00000452483 HAMPP81172 84 aa2.15□□□□□ -2.07
HMGB3P21-201ENST00000452483 Q6ZRX8 168 aa2.15□□□□□ -2.07
HMGB3P21-201ENST00000452483 PLAC4Q8WY50 150 aa2.15□□□□□ -2.07
HMGB3P21-201ENST00000452483 CROCC2H7BZ55 1655 aa2.15□□□□□ -2.07
HMGB3P21-201ENST00000452483 EIF2AK4Q9P2K8 1649 aaKnown RBP2.14□□□□□ -2.07
HMGB3P21-201ENST00000452483 ICE1Q9Y2F5 2266 aa2.14□□□□□ -2.07
HMGB3P21-201ENST00000452483 UNQ6190/PRO20217Q6UXQ8 127 aa2.14□□□□□ -2.07
HMGB3P21-201ENST00000452483 KIAA0556O60303 1618 aa2.13□□□□□ -2.07
HMGB3P21-201ENST00000452483 PAPPA2Q9BXP8 1791 aa2.13□□□□□ -2.07
HMGB3P21-201ENST00000452483 NCR3O14931 201 aa2.13□□□□□ -2.07
HMGB3P21-201ENST00000452483 KRTAP13-3Q3SY46 172 aa2.13□□□□□ -2.07
HMGB3P21-201ENST00000452483 ENHOQ6UWT2 76 aa2.13□□□□□ -2.07
HMGB3P21-201ENST00000452483 UBL5Q9BZL1 73 aa2.13□□□□□ -2.07
HMGB3P21-201ENST00000452483 FMN2Q9NZ56 1722 aa2.13□□□□□ -2.07
HMGB3P21-201ENST00000452483 ZFHX3Q15911 3703 aa2.12□□□□□ -2.07
HMGB3P21-201ENST00000452483 GVQW2A0A096LPI5 108 aaPredicted RBP2.12□□□□□ -2.07
HMGB3P21-201ENST00000452483 LCE3AQ5TA76 89 aa2.12□□□□□ -2.07
HMGB3P21-201ENST00000452483 E9PCH4 1651 aa2.12□□□□□ -2.07
HMGB3P21-201ENST00000452483 ABCC6O95255 1503 aa2.12□□□□□ -2.07
HMGB3P21-201ENST00000452483 LCE6AA0A183 80 aa2.11□□□□□ -2.07
HMGB3P21-201ENST00000452483 PRH1P02810 166 aa2.11□□□□□ -2.07
HMGB3P21-201ENST00000452483 SPINK13Q1W4C9 94 aa2.11□□□□□ -2.07
HMGB3P21-201ENST00000452483 NCBP2-AS2Q69YL0 99 aa2.11□□□□□ -2.07
HMGB3P21-201ENST00000452483 BRD3OSQ6XYD6 125 aa2.11□□□□□ -2.07
HMGB3P21-201ENST00000452483 TOMM5Q8N4H5 51 aa2.11□□□□□ -2.07
HMGB3P21-201ENST00000452483 BIVM-ERCC5R4GMW8 1640 aa2.1□□□□□ -2.07
HMGB3P21-201ENST00000452483 A0A096LNT2 108 aa2.1□□□□□ -2.07
HMGB3P21-201ENST00000452483 G3V318 75 aa2.1□□□□□ -2.07
HMGB3P21-201ENST00000452483 KRTAP13-4Q3LI77 160 aa2.1□□□□□ -2.07
HMGB3P21-201ENST00000452483 SSBP3-AS1Q7Z2R9 100 aa2.1□□□□□ -2.07
HMGB3P21-201ENST00000452483 NRAPQ86VF7 1730 aa2.1□□□□□ -2.07
HMGB3P21-201ENST00000452483 ABCA1O95477 2261 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms