RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 LOC110117498A0A087WWA1 95 aa2.84□□□□□ -1.95
HMGB3P22-202ENST00000451823 FAM236DA0A1B0GTK5 79 aa2.84□□□□□ -1.95
HMGB3P22-202ENST00000451823 H3BUX3 64 aa2.84□□□□□ -1.95
HMGB3P22-202ENST00000451823 CCL21O00585 134 aa2.84□□□□□ -1.95
HMGB3P22-202ENST00000451823 NCR3O14931 201 aa2.84□□□□□ -1.95
HMGB3P22-202ENST00000451823 LECT2O14960 151 aa2.84□□□□□ -1.95
HMGB3P22-202ENST00000451823 PRM2P04554 102 aa2.84□□□□□ -1.95
HMGB3P22-202ENST00000451823 FAM236CP0DP71 79 aa2.84□□□□□ -1.95
HMGB3P22-202ENST00000451823 RPL35AP18077 110 aaKnown RBP2.84□□□□□ -1.95
HMGB3P22-202ENST00000451823 PFN2P35080 140 aa2.84□□□□□ -1.95
HMGB3P22-202ENST00000451823 CD164Q04900 197 aa2.84□□□□□ -1.95
HMGB3P22-202ENST00000451823 LY6EQ16553 131 aa2.84□□□□□ -1.95
HMGB3P22-202ENST00000451823 BRD3OSQ6XYD6 125 aa2.84□□□□□ -1.95
HMGB3P22-202ENST00000451823 C10orf105Q8TEF2 133 aa2.84□□□□□ -1.95
HMGB3P22-202ENST00000451823 RETNQ9HD89 108 aa2.84□□□□□ -1.95
HMGB3P22-202ENST00000451823 ORMDL1Q9P0S3 153 aa2.84□□□□□ -1.95
HMGB3P22-202ENST00000451823 TPRP12270 2363 aaKnown RBP2.83□□□□□ -1.96
HMGB3P22-202ENST00000451823 ZZEF1O43149 2961 aa2.83□□□□□ -1.96
HMGB3P22-202ENST00000451823 ANKHD1Q8IWZ3 2542 aaKnown RBP2.83□□□□□ -1.96
HMGB3P22-202ENST00000451823 CEP295Q9C0D2 2601 aa2.83□□□□□ -1.96
HMGB3P22-202ENST00000451823 A0A087WZ39 114 aa2.83□□□□□ -1.96
HMGB3P22-202ENST00000451823 IGLV5-52A0A0A0MRZ9 124 aa2.83□□□□□ -1.96
HMGB3P22-202ENST00000451823 IGHV4-28A0A0C4DH34 117 aa2.83□□□□□ -1.96
HMGB3P22-202ENST00000451823 IGHV4-61A0A0C4DH41 118 aa2.83□□□□□ -1.96
HMGB3P22-202ENST00000451823 DEFB131AP59861 70 aa2.83□□□□□ -1.96
HMGB3P22-202ENST00000451823 C10orf99Q6UWK7 81 aa2.83□□□□□ -1.96
HMGB3P22-202ENST00000451823 FP248Q71RG6 208 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P22-202ENST00000451823 C1orf158Q8N1D5 194 aa2.83□□□□□ -1.96
HMGB3P22-202ENST00000451823 Q8N814 137 aa2.83□□□□□ -1.96
HMGB3P22-202ENST00000451823 DSPP15924 2871 aaKnown RBP2.83□□□□□ -1.96
HMGB3P22-202ENST00000451823 SMIM26A0A096LP01 95 aa2.82□□□□□ -1.96
HMGB3P22-202ENST00000451823 TMEM256-PLSCR3K7ERE1 68 aa2.82□□□□□ -1.96
HMGB3P22-202ENST00000451823 INSP01308 110 aa2.82□□□□□ -1.96
HMGB3P22-202ENST00000451823 C9orf66Q5T8R8 295 aa2.82□□□□□ -1.96
HMGB3P22-202ENST00000451823 ENHOQ6UWT2 76 aa2.82□□□□□ -1.96
HMGB3P22-202ENST00000451823 Q6ZQT0 140 aa2.82□□□□□ -1.96
HMGB3P22-202ENST00000451823 C20orf197Q8N268 126 aa2.82□□□□□ -1.96
HMGB3P22-202ENST00000451823 C6orf223Q8N319 242 aa2.82□□□□□ -1.96
HMGB3P22-202ENST00000451823 UBE2E2Q96LR5 201 aa2.82□□□□□ -1.96
HMGB3P22-202ENST00000451823 TMEM243Q9BU79 118 aa2.82□□□□□ -1.96
HMGB3P22-202ENST00000451823 BOD1L1Q8NFC6 3051 aa2.82□□□□□ -1.96
HMGB3P22-202ENST00000451823 ATMQ13315 3056 aa2.82□□□□□ -1.96
HMGB3P22-202ENST00000451823 SPENQ96T58 3664 aaKnown RBP2.81□□□□□ -1.96
HMGB3P22-202ENST00000451823 TRAV23DV6A0A075B6W5 121 aa2.81□□□□□ -1.96
HMGB3P22-202ENST00000451823 IGHV4-59P01825 116 aa2.81□□□□□ -1.96
HMGB3P22-202ENST00000451823 LINC00158P58513 81 aa2.81□□□□□ -1.96
HMGB3P22-202ENST00000451823 ZNF702PQ9H963 129 aa2.81□□□□□ -1.96
HMGB3P22-202ENST00000451823 MGAQ8IWI9 3026 aa2.81□□□□□ -1.96
HMGB3P22-202ENST00000451823 RP1L1Q8IWN7 2480 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 IGLV4-60A0A075B6I1 120 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 TRAV10A0A0B4J240 114 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 TRBV7-4A0A0J9YYF1 115 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 PLAC8L1A1L4L8 177 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 M0R2N4 97 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 NDUFC1O43677 76 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 ERC2-IT1O76042 136 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 MSMBP08118 114 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 IGHV4-31P0DP07 118 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 HTN1P15515 57 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 ATP5EP56381 51 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 LINC01547P58512 204 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 CXCL6P80162 114 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 KIAA0087Q14695 138 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 DEFB114Q30KQ6 69 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 LINC00575Q6W349 94 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 Q8IZM0 81 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 WFDC9Q8NEX5 89 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 UBL5Q9BZL1 73 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 ESM1Q9NQ30 184 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 NCOR2Q9Y618 2525 aa2.8□□□□□ -1.96
HMGB3P22-202ENST00000451823 AKAP13Q12802 2813 aa2.79□□□□□ -1.96
HMGB3P22-202ENST00000451823 SPTBN1Q01082 2364 aaKnown RBP2.79□□□□□ -1.96
HMGB3P22-202ENST00000451823 IGHV4-30-2A0A087WSY4 118 aa2.79□□□□□ -1.96
HMGB3P22-202ENST00000451823 TRBV6-8A0A0A6YYG3 113 aa2.79□□□□□ -1.96
HMGB3P22-202ENST00000451823 LOC100131303A0A0U1RQF7 123 aa2.79□□□□□ -1.96
HMGB3P22-202ENST00000451823 LINC00959A0A1B0GUT2 108 aa2.79□□□□□ -1.96
HMGB3P22-202ENST00000451823 H3BQ85 93 aa2.79□□□□□ -1.96
HMGB3P22-202ENST00000451823 C19orf84I3L1E1 186 aa2.79□□□□□ -1.96
HMGB3P22-202ENST00000451823 KALRNO60229 2985 aa2.79□□□□□ -1.96
HMGB3P22-202ENST00000451823 GIG44P09565 113 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P22-202ENST00000451823 PDE6GP18545 87 aa2.79□□□□□ -1.96
HMGB3P22-202ENST00000451823 COX17Q14061 63 aa2.79□□□□□ -1.96
HMGB3P22-202ENST00000451823 DEFB112Q30KQ8 113 aa2.79□□□□□ -1.96
HMGB3P22-202ENST00000451823 Q6ZTI0 123 aa2.79□□□□□ -1.96
HMGB3P22-202ENST00000451823 Q6ZVQ6 151 aa2.79□□□□□ -1.96
HMGB3P22-202ENST00000451823 MUC7Q8TAX7 377 aa2.79□□□□□ -1.96
HMGB3P22-202ENST00000451823 RMI2Q96E14 147 aa2.79□□□□□ -1.96
HMGB3P22-202ENST00000451823 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
HMGB3P22-202ENST00000451823 PKIGQ9Y2B9 76 aa2.79□□□□□ -1.96
HMGB3P22-202ENST00000451823 SMG1Q96Q15 3661 aaKnown RBP2.78□□□□□ -1.96
HMGB3P22-202ENST00000451823 ACACAQ13085 2346 aa2.78□□□□□ -1.96
HMGB3P22-202ENST00000451823 TRGV1A0A0A0MS02 117 aa2.78□□□□□ -1.96
HMGB3P22-202ENST00000451823 TRBV7-6A0A0J9YX20 115 aa2.78□□□□□ -1.96
HMGB3P22-202ENST00000451823 LINC00612Q8N6U2 182 aa2.78□□□□□ -1.96
HMGB3P22-202ENST00000451823 Q8NDZ9 215 aa2.78□□□□□ -1.96
HMGB3P22-202ENST00000451823 TOMM7Q9P0U1 55 aa2.78□□□□□ -1.96
HMGB3P22-202ENST00000451823 ANKRD11Q6UB99 2663 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P22-202ENST00000451823 MAP1BP46821 2468 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms